RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 LY9Q9HBG7 655 aa22.44■■□□□ 1.18
DDX39A-214ENST00000590556 GPHNQ9NQX3 736 aaPredicted RBP22.44■■□□□ 1.18
DDX39A-214ENST00000590556 ISY1Q9ULR0 285 aaKnown RBP22.44■■□□□ 1.18
DDX39A-214ENST00000590556 BMP3P12645 472 aa22.43■■□□□ 1.18
DDX39A-214ENST00000590556 RPS6KB1P23443 525 aa22.43■■□□□ 1.18
DDX39A-214ENST00000590556 TMTC2Q8N394 836 aa22.43■■□□□ 1.18
DDX39A-214ENST00000590556 SMCR8Q8TEV9 937 aaPredicted RBP22.43■■□□□ 1.18
DDX39A-214ENST00000590556 DCAF4Q8WV16 495 aa22.43■■□□□ 1.18
DDX39A-214ENST00000590556 C22orf23Q9BZE7 217 aa22.43■■□□□ 1.18
DDX39A-214ENST00000590556 SENP2Q9HC62 589 aa22.43■■□□□ 1.18
DDX39A-214ENST00000590556 ZSWIM6Q9HCJ5 1215 aa22.43■■□□□ 1.18
DDX39A-214ENST00000590556 FLOT1O75955 427 aa22.42■■□□□ 1.18
DDX39A-214ENST00000590556 HSPA1AP0DMV8 641 aaKnown RBP22.42■■□□□ 1.18
DDX39A-214ENST00000590556 HSPA1BP0DMV9 641 aaKnown RBP22.42■■□□□ 1.18
DDX39A-214ENST00000590556 FGD1P98174 961 aa22.42■■□□□ 1.18
DDX39A-214ENST00000590556 COG2Q14746 738 aa22.42■■□□□ 1.18
DDX39A-214ENST00000590556 CCDC96Q2M329 555 aa22.42■■□□□ 1.18
DDX39A-214ENST00000590556 NFXL1Q6ZNB6 911 aa22.42■■□□□ 1.18
DDX39A-214ENST00000590556 R3HDMLQ9H3Y0 253 aa22.42■■□□□ 1.18
DDX39A-214ENST00000590556 CYP46A1Q9Y6A2 500 aa22.42■■□□□ 1.18
DDX39A-214ENST00000590556 TLR2O60603 784 aa22.41■■□□□ 1.18
DDX39A-214ENST00000590556 LIFRP42702 1097 aa22.41■■□□□ 1.18
DDX39A-214ENST00000590556 HERVK_113P62684 666 aa22.41■■□□□ 1.18
DDX39A-214ENST00000590556 RUFY3Q7L099 469 aa22.41■■□□□ 1.18
DDX39A-214ENST00000590556 HOXC10Q9NYD6 342 aa22.41■■□□□ 1.18
DDX39A-214ENST00000590556 TSKSQ9UJT2 592 aa22.41■■□□□ 1.18
DDX39A-214ENST00000590556 FEM1BQ9UK73 627 aa22.41■■□□□ 1.18
DDX39A-214ENST00000590556 PCNTO95613 3336 aa22.41■■□□□ 1.18
DDX39A-214ENST00000590556 CCDC69A6NI79 296 aa22.4■■□□□ 1.18
DDX39A-214ENST00000590556 TMEM232C9JQI7 657 aa22.4■■□□□ 1.18
DDX39A-214ENST00000590556 PDHBP11177 359 aa22.4■■□□□ 1.18
DDX39A-214ENST00000590556 SAMD1Q6SPF0 538 aaPredicted RBP22.4■■□□□ 1.18
DDX39A-214ENST00000590556 KCTD1Q719H9 257 aa22.4■■□□□ 1.18
DDX39A-214ENST00000590556 RASGRP2Q7LDG7 609 aa22.4■■□□□ 1.18
DDX39A-214ENST00000590556 CATIPQ7Z7H3 387 aa22.4■■□□□ 1.18
DDX39A-214ENST00000590556 IL17RAQ96F46 866 aa22.4■■□□□ 1.18
DDX39A-214ENST00000590556 UPF3BQ9BZI7 483 aaKnown RBP22.4■■□□□ 1.18
DDX39A-214ENST00000590556 FBXO28Q9NVF7 368 aa22.4■■□□□ 1.18
DDX39A-214ENST00000590556 ADGRA2Q96PE1 1338 aa22.39■■□□□ 1.18
DDX39A-214ENST00000590556 FOXN1O15353 648 aa22.39■■□□□ 1.17
DDX39A-214ENST00000590556 SNHG28P0DPA3 235 aa22.39■■□□□ 1.17
DDX39A-214ENST00000590556 DSG3P32926 999 aa22.39■■□□□ 1.17
DDX39A-214ENST00000590556 GCLCP48506 637 aaPredicted RBP22.39■■□□□ 1.17
DDX39A-214ENST00000590556 IKQ13123 557 aaPredicted RBP22.39■■□□□ 1.17
DDX39A-214ENST00000590556 Q6ZUG5 572 aa22.39■■□□□ 1.17
DDX39A-214ENST00000590556 GTF3C2Q8WUA4 911 aaPredicted RBP22.39■■□□□ 1.17
DDX39A-214ENST00000590556 GPCPD1Q9NPB8 672 aa22.39■■□□□ 1.17
DDX39A-214ENST00000590556 CPA4Q9UI42 421 aa22.39■■□□□ 1.17
DDX39A-214ENST00000590556 FRMPD2Q68DX3 1309 aaPredicted RBP22.38■■□□□ 1.17
DDX39A-214ENST00000590556 SPDYE16A6NNV3 312 aaPredicted RBP22.38■■□□□ 1.17
DDX39A-214ENST00000590556 RBM25P49756 843 aaKnown RBP22.38■■□□□ 1.17
DDX39A-214ENST00000590556 ZNF543Q08ER8 600 aa22.38■■□□□ 1.17
DDX39A-214ENST00000590556 C17orf99Q6UX52 265 aa22.38■■□□□ 1.17
DDX39A-214ENST00000590556 SGMS1Q86VZ5 419 aa22.38■■□□□ 1.17
DDX39A-214ENST00000590556 CHURC1Q8WUH1 139 aa22.38■■□□□ 1.17
DDX39A-214ENST00000590556 SLF1Q9BQI6 1058 aa22.38■■□□□ 1.17
DDX39A-214ENST00000590556 MYPNQ86TC9 1320 aa22.37■■□□□ 1.17
DDX39A-214ENST00000590556 PARP1P09874 1014 aaKnown RBP22.37■■□□□ 1.17
DDX39A-214ENST00000590556 STAT2P52630 851 aa22.37■■□□□ 1.17
DDX39A-214ENST00000590556 GPATCH4Q5T3I0 446 aaKnown RBP22.37■■□□□ 1.17
DDX39A-214ENST00000590556 FAM160B2Q86V87 743 aa22.37■■□□□ 1.17
DDX39A-214ENST00000590556 ZNF654Q8IZM8 581 aa22.37■■□□□ 1.17
DDX39A-214ENST00000590556 PRPF38AQ8NAV1 312 aaKnown RBP22.37■■□□□ 1.17
DDX39A-214ENST00000590556 KIFC2Q96AC6 838 aa22.37■■□□□ 1.17
DDX39A-214ENST00000590556 PDRG1Q9NUG6 133 aa22.37■■□□□ 1.17
DDX39A-214ENST00000590556 PPP1R9AQ9ULJ8 1098 aa22.37■■□□□ 1.17
DDX39A-214ENST00000590556 SLC12A7Q9Y666 1083 aa22.37■■□□□ 1.17
DDX39A-214ENST00000590556 RLFQ13129 1914 aa22.37■■□□□ 1.17
DDX39A-214ENST00000590556 PARP14Q460N5 1801 aa22.36■■□□□ 1.17
DDX39A-214ENST00000590556 GPR25O00155 361 aa22.36■■□□□ 1.17
DDX39A-214ENST00000590556 PLA2G6O60733 806 aa22.36■■□□□ 1.17
DDX39A-214ENST00000590556 GOLGA8HP0CJ92 632 aa22.36■■□□□ 1.17
DDX39A-214ENST00000590556 CTCFP49711 727 aaPredicted RBP22.36■■□□□ 1.17
DDX39A-214ENST00000590556 TROAPQ12815 778 aa22.36■■□□□ 1.17
DDX39A-214ENST00000590556 ASPRV1Q53RT3 343 aa22.36■■□□□ 1.17
DDX39A-214ENST00000590556 TTBK2Q6IQ55 1244 aa22.36■■□□□ 1.17
DDX39A-214ENST00000590556 LBX2Q6XYB7 198 aa22.36■■□□□ 1.17
DDX39A-214ENST00000590556 SYNE3Q6ZMZ3 975 aa22.36■■□□□ 1.17
DDX39A-214ENST00000590556 FBXL16Q8N461 479 aa22.36■■□□□ 1.17
DDX39A-214ENST00000590556 ANKRD13CQ8N6S4 541 aa22.36■■□□□ 1.17
DDX39A-214ENST00000590556 NUP133Q8WUM0 1156 aa22.36■■□□□ 1.17
DDX39A-214ENST00000590556 ATG4CQ96DT6 458 aa22.36■■□□□ 1.17
DDX39A-214ENST00000590556 DDAH1O94760 285 aa22.35■■□□□ 1.17
DDX39A-214ENST00000590556 HSPA8P11142 646 aaKnown RBP22.35■■□□□ 1.17
DDX39A-214ENST00000590556 BCRP11274 1271 aa22.35■■□□□ 1.17
DDX39A-214ENST00000590556 GRM4Q14833 912 aa22.35■■□□□ 1.17
DDX39A-214ENST00000590556 NOM1Q5C9Z4 860 aaKnown RBP22.35■■□□□ 1.17
DDX39A-214ENST00000590556 BRF1Q92994 677 aa22.35■■□□□ 1.17
DDX39A-214ENST00000590556 PAGR1Q9BTK6 254 aa22.35■■□□□ 1.17
DDX39A-214ENST00000590556 MYL10Q9BUA6 226 aa22.35■■□□□ 1.17
DDX39A-214ENST00000590556 RBPJLQ9UBG7 517 aa22.35■■□□□ 1.17
DDX39A-214ENST00000590556 RABGAP1Q9Y3P9 1069 aa22.35■■□□□ 1.17
DDX39A-214ENST00000590556 CALM1P0DP23 149 aa22.34■■□□□ 1.17
DDX39A-214ENST00000590556 CALM2P0DP24 149 aa22.34■■□□□ 1.17
DDX39A-214ENST00000590556 CALM3P0DP25 149 aa22.34■■□□□ 1.17
DDX39A-214ENST00000590556 SLC16A2P36021 539 aa22.34■■□□□ 1.17
DDX39A-214ENST00000590556 POTEEQ6S8J3 1075 aa22.34■■□□□ 1.17
DDX39A-214ENST00000590556 BTNL9Q6UXG8 535 aa22.34■■□□□ 1.17
DDX39A-214ENST00000590556 MB21D1Q8N884 522 aa22.34■■□□□ 1.17
DDX39A-214ENST00000590556 AGXT2Q9BYV1 514 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms