RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 PFKFB3Q16875 520 aaPredicted RBP13.99□□□□□ -0.17
PDE4A-207ENST00000590407 HDXQ7Z353 690 aa13.99□□□□□ -0.17
PDE4A-207ENST00000590407 CTCFLQ8NI51 663 aaPredicted RBP13.99□□□□□ -0.17
PDE4A-207ENST00000590407 IRX2Q9BZI1 471 aaPredicted RBP13.99□□□□□ -0.17
PDE4A-207ENST00000590407 EPC1Q9H2F5 836 aa13.99□□□□□ -0.17
PDE4A-207ENST00000590407 LZTFL1Q9NQ48 299 aa13.99□□□□□ -0.17
PDE4A-207ENST00000590407 BTG4Q9NY30 223 aa13.99□□□□□ -0.17
PDE4A-207ENST00000590407 DOT1LQ8TEK3 1739 aa13.98□□□□□ -0.17
PDE4A-207ENST00000590407 ERVK-24P63145 666 aa13.98□□□□□ -0.17
PDE4A-207ENST00000590407 KCNB1Q14721 858 aa13.98□□□□□ -0.17
PDE4A-207ENST00000590407 KIF4BQ2VIQ3 1234 aa13.98□□□□□ -0.17
PDE4A-207ENST00000590407 SBK1Q52WX2 424 aa13.98□□□□□ -0.17
PDE4A-207ENST00000590407 RRAGBQ5VZM2 374 aa13.98□□□□□ -0.17
PDE4A-207ENST00000590407 CTR9Q6PD62 1173 aa13.98□□□□□ -0.17
PDE4A-207ENST00000590407 L1RE1Q9UN81 338 aa13.98□□□□□ -0.17
PDE4A-207ENST00000590407 LAMB1P07942 1786 aa13.98□□□□□ -0.17
PDE4A-207ENST00000590407 KCNJ18B7U540 433 aa13.97□□□□□ -0.17
PDE4A-207ENST00000590407 POLR3GO15318 223 aaPredicted RBP13.97□□□□□ -0.17
PDE4A-207ENST00000590407 PRDM1O75626 825 aa13.97□□□□□ -0.17
PDE4A-207ENST00000590407 AMPD2Q01433 879 aa13.97□□□□□ -0.17
PDE4A-207ENST00000590407 KCNJ12Q14500 433 aa13.97□□□□□ -0.17
PDE4A-207ENST00000590407 SF3B3Q15393 1217 aaKnown RBP13.97□□□□□ -0.17
PDE4A-207ENST00000590407 SLC35F6Q8N357 371 aa13.97□□□□□ -0.17
PDE4A-207ENST00000590407 SRBD1Q8N5C6 995 aaKnown RBP13.97□□□□□ -0.17
PDE4A-207ENST00000590407 C4orf32Q8N8J7 132 aa13.97□□□□□ -0.17
PDE4A-207ENST00000590407 NELFBQ8WX92 580 aa13.97□□□□□ -0.17
PDE4A-207ENST00000590407 MTRQ99707 1265 aa13.97□□□□□ -0.17
PDE4A-207ENST00000590407 CDCA7Q9BWT1 371 aaPredicted RBP13.97□□□□□ -0.17
PDE4A-207ENST00000590407 BSDC1Q9NW68 430 aaPredicted RBP13.97□□□□□ -0.17
PDE4A-207ENST00000590407 CTAGE15A4D2H0 777 aa13.96□□□□□ -0.17
PDE4A-207ENST00000590407 EIF3JO75822 258 aaKnown RBP13.96□□□□□ -0.17
PDE4A-207ENST00000590407 RPN1P04843 607 aaKnown RBP13.96□□□□□ -0.17
PDE4A-207ENST00000590407 CTAGE8P0CG41 777 aa13.96□□□□□ -0.17
PDE4A-207ENST00000590407 EEF1GP26641 437 aaKnown RBP13.96□□□□□ -0.17
PDE4A-207ENST00000590407 CASP1P29466 404 aa13.96□□□□□ -0.17
PDE4A-207ENST00000590407 KIF5BP33176 963 aa13.96□□□□□ -0.17
PDE4A-207ENST00000590407 CRKLP46109 303 aaKnown RBP13.96□□□□□ -0.17
PDE4A-207ENST00000590407 WDR93Q6P2C0 686 aa13.96□□□□□ -0.17
PDE4A-207ENST00000590407 CTAGE6Q86UF2 777 aa13.96□□□□□ -0.17
PDE4A-207ENST00000590407 CTAGE4Q8IX94 777 aa13.96□□□□□ -0.17
PDE4A-207ENST00000590407 SMYD4Q8IYR2 804 aaPredicted RBP13.96□□□□□ -0.17
PDE4A-207ENST00000590407 NOC3LQ8WTT2 800 aaKnown RBP13.96□□□□□ -0.17
PDE4A-207ENST00000590407 CPLX3Q8WVH0 158 aa13.96□□□□□ -0.17
PDE4A-207ENST00000590407 ANKS1AQ92625 1134 aa13.96□□□□□ -0.17
PDE4A-207ENST00000590407 DNAJC7Q99615 494 aa13.96□□□□□ -0.17
PDE4A-207ENST00000590407 MYH13Q9UKX3 1938 aa13.96□□□□□ -0.17
PDE4A-207ENST00000590407 MAST2Q6P0Q8 1798 aa13.96□□□□□ -0.18
PDE4A-207ENST00000590407 ERICH4A6NGS2 130 aa13.96□□□□□ -0.18
PDE4A-207ENST00000590407 LGALS16A8MUM7 142 aa13.96□□□□□ -0.18
PDE4A-207ENST00000590407 PSMD14O00487 310 aa13.96□□□□□ -0.18
PDE4A-207ENST00000590407 HNRNPH2P55795 449 aaKnown RBP13.96□□□□□ -0.18
PDE4A-207ENST00000590407 NLRP5P59047 1200 aa13.96□□□□□ -0.18
PDE4A-207ENST00000590407 IL17AQ16552 155 aa13.96□□□□□ -0.18
PDE4A-207ENST00000590407 CAVIN4Q5BKX8 364 aa13.96□□□□□ -0.18
PDE4A-207ENST00000590407 WWC2Q6AWC2 1192 aa13.96□□□□□ -0.18
PDE4A-207ENST00000590407 GALNT17Q6IS24 598 aa13.96□□□□□ -0.18
PDE4A-207ENST00000590407 CLEC4GQ6UXB4 293 aa13.96□□□□□ -0.18
PDE4A-207ENST00000590407 TSPYL1Q9H0U9 437 aa13.96□□□□□ -0.18
PDE4A-207ENST00000590407 THAP9Q9H5L6 903 aa13.96□□□□□ -0.18
PDE4A-207ENST00000590407 MAGEF1Q9HAY2 307 aa13.96□□□□□ -0.18
PDE4A-207ENST00000590407 ATP8A2Q9NTI2 1148 aa13.96□□□□□ -0.18
PDE4A-207ENST00000590407 ABCF2Q9UG63 623 aa13.96□□□□□ -0.18
PDE4A-207ENST00000590407 BAZ2AQ9UIF9 1905 aaKnown RBP13.95□□□□□ -0.18
PDE4A-207ENST00000590407 KRT9P35527 623 aa13.95□□□□□ -0.18
PDE4A-207ENST00000590407 NOM1Q5C9Z4 860 aaKnown RBP13.95□□□□□ -0.18
PDE4A-207ENST00000590407 FBXO33Q7Z6M2 555 aa13.95□□□□□ -0.18
PDE4A-207ENST00000590407 ANKRD18AQ8IVF6 992 aa13.95□□□□□ -0.18
PDE4A-207ENST00000590407 ADSSL1Q8N142 457 aa13.95□□□□□ -0.18
PDE4A-207ENST00000590407 DAGLBQ8NCG7 672 aa13.95□□□□□ -0.18
PDE4A-207ENST00000590407 ACRBPQ8NEB7 543 aa13.95□□□□□ -0.18
PDE4A-207ENST00000590407 ZNF384Q8TF68 577 aa13.95□□□□□ -0.18
PDE4A-207ENST00000590407 HAUS4Q9H6D7 363 aa13.95□□□□□ -0.18
PDE4A-207ENST00000590407 ARPP21Q9UBL0 812 aaPredicted RBP13.95□□□□□ -0.18
PDE4A-207ENST00000590407 NIP7Q9Y221 180 aaKnown RBP eCLIP13.95□□□□□ -0.18
PDE4A-207ENST00000590407 ZNF652Q9Y2D9 606 aa13.95□□□□□ -0.18
PDE4A-207ENST00000590407 EPN1Q9Y6I3 576 aaPredicted RBP13.95□□□□□ -0.18
PDE4A-207ENST00000590407 A0A0U1RQJ8 604 aa13.94□□□□□ -0.18
PDE4A-207ENST00000590407 LAD1O00515 517 aa13.94□□□□□ -0.18
PDE4A-207ENST00000590407 MCM3P25205 808 aa13.94□□□□□ -0.18
PDE4A-207ENST00000590407 CCT6AP40227 531 aaKnown RBP13.94□□□□□ -0.18
PDE4A-207ENST00000590407 ST5P78524 1137 aa13.94□□□□□ -0.18
PDE4A-207ENST00000590407 SLC20A2Q08357 652 aa13.94□□□□□ -0.18
PDE4A-207ENST00000590407 PIK3AP1Q6ZUJ8 805 aa13.94□□□□□ -0.18
PDE4A-207ENST00000590407 IRF2BP1Q8IU81 584 aa13.94□□□□□ -0.18
PDE4A-207ENST00000590407 RETREG2Q8NC44 543 aa13.94□□□□□ -0.18
PDE4A-207ENST00000590407 OR8K1Q8NGG5 319 aa13.94□□□□□ -0.18
PDE4A-207ENST00000590407 ZNF507Q8TCN5 953 aa13.94□□□□□ -0.18
PDE4A-207ENST00000590407 ATRIPQ8WXE1 791 aa13.94□□□□□ -0.18
PDE4A-207ENST00000590407 PNKPQ96T60 521 aa13.94□□□□□ -0.18
PDE4A-207ENST00000590407 NUP88Q99567 741 aaPredicted RBP13.94□□□□□ -0.18
PDE4A-207ENST00000590407 CRNKL1Q9BZJ0 848 aaKnown RBP13.94□□□□□ -0.18
PDE4A-207ENST00000590407 CCSER1Q9C0I3 900 aa13.94□□□□□ -0.18
PDE4A-207ENST00000590407 CUEDC2Q9H467 287 aa13.94□□□□□ -0.18
PDE4A-207ENST00000590407 TAB2Q9NYJ8 693 aa13.94□□□□□ -0.18
PDE4A-207ENST00000590407 PUF60Q9UHX1 559 aaKnown RBP13.94□□□□□ -0.18
PDE4A-207ENST00000590407 MYO6Q9UM54 1294 aa13.94□□□□□ -0.18
PDE4A-207ENST00000590407 KIAA1551Q9HCM1 1747 aa13.94□□□□□ -0.18
PDE4A-207ENST00000590407 ZNF831Q5JPB2 1677 aa13.94□□□□□ -0.18
PDE4A-207ENST00000590407 USP17L12C9JPN9 530 aa13.94□□□□□ -0.18
PDE4A-207ENST00000590407 USP17L21D6R901 530 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms