RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 SAP30BPQ9UHR5 308 aaKnown RBP21.79■■□□□ 1.08
PRKCSH-209ENST00000589838 A0A087X0B3 334 aa21.78■■□□□ 1.08
PRKCSH-209ENST00000589838 KLRG2A4D1S0 409 aaPredicted RBP21.78■■□□□ 1.08
PRKCSH-209ENST00000589838 PALM3A6NDB9 673 aaPredicted RBP21.78■■□□□ 1.08
PRKCSH-209ENST00000589838 ZNF18P17022 549 aa21.78■■□□□ 1.08
PRKCSH-209ENST00000589838 MCM7P33993 719 aa21.78■■□□□ 1.08
PRKCSH-209ENST00000589838 TXLNAP40222 546 aa21.78■■□□□ 1.08
PRKCSH-209ENST00000589838 AFMP43652 599 aa21.78■■□□□ 1.08
PRKCSH-209ENST00000589838 CDK8P49336 464 aa21.78■■□□□ 1.08
PRKCSH-209ENST00000589838 NOM1Q5C9Z4 860 aaKnown RBP21.78■■□□□ 1.08
PRKCSH-209ENST00000589838 MFSD14BQ5SR56 506 aa21.78■■□□□ 1.08
PRKCSH-209ENST00000589838 STAG2Q8N3U4 1231 aa21.78■■□□□ 1.08
PRKCSH-209ENST00000589838 NEDD1Q8NHV4 660 aa21.78■■□□□ 1.08
PRKCSH-209ENST00000589838 FAM205AQ6ZU69 1335 aa21.78■■□□□ 1.08
PRKCSH-209ENST00000589838 MYH1P12882 1939 aa21.78■■□□□ 1.08
PRKCSH-209ENST00000589838 CCDC194A0A1B0GVG4 234 aa21.77■■□□□ 1.08
PRKCSH-209ENST00000589838 USP27XA6NNY8 438 aa21.77■■□□□ 1.08
PRKCSH-209ENST00000589838 WNT7AO00755 349 aa21.77■■□□□ 1.08
PRKCSH-209ENST00000589838 DPYDQ12882 1025 aa21.77■■□□□ 1.08
PRKCSH-209ENST00000589838 SYCP1Q15431 976 aa21.77■■□□□ 1.08
PRKCSH-209ENST00000589838 EYA3Q99504 573 aa21.77■■□□□ 1.08
PRKCSH-209ENST00000589838 STX8Q9UNK0 236 aa21.77■■□□□ 1.08
PRKCSH-209ENST00000589838 FMR1Q06787 632 aaKnown RBP eCLIP21.77■■□□□ 1.08
PRKCSH-209ENST00000589838 SLC51AQ86UW1 340 aa21.77■■□□□ 1.08
PRKCSH-209ENST00000589838 SP8Q8IXZ3 490 aa21.77■■□□□ 1.08
PRKCSH-209ENST00000589838 CCDC12Q8WUD4 166 aaPredicted RBP21.77■■□□□ 1.08
PRKCSH-209ENST00000589838 TRMT1Q9NXH9 659 aaKnown RBP21.77■■□□□ 1.08
PRKCSH-209ENST00000589838 GAKO14976 1311 aa21.76■■□□□ 1.07
PRKCSH-209ENST00000589838 C6orf229H3BNL8 230 aa21.76■■□□□ 1.07
PRKCSH-209ENST00000589838 SMARCA1P28370 1054 aa21.76■■□□□ 1.07
PRKCSH-209ENST00000589838 SPZ1Q9BXG8 430 aa21.76■■□□□ 1.07
PRKCSH-209ENST00000589838 BARHL2Q9NY43 387 aa21.76■■□□□ 1.07
PRKCSH-209ENST00000589838 POLLQ9UGP5 575 aa21.76■■□□□ 1.07
PRKCSH-209ENST00000589838 SUGT1Q9Y2Z0 365 aa21.76■■□□□ 1.07
PRKCSH-209ENST00000589838 DDX60LQ5H9U9 1706 aaKnown RBP21.76■■□□□ 1.07
PRKCSH-209ENST00000589838 POLRMTO00411 1230 aaKnown RBP21.75■■□□□ 1.07
PRKCSH-209ENST00000589838 ZNF827Q17R98 1081 aa21.75■■□□□ 1.07
PRKCSH-209ENST00000589838 SPATA1Q5VX52 437 aa21.75■■□□□ 1.07
PRKCSH-209ENST00000589838 SLC44A5Q8NCS7 719 aa21.75■■□□□ 1.07
PRKCSH-209ENST00000589838 KIF18AQ8NI77 898 aa21.75■■□□□ 1.07
PRKCSH-209ENST00000589838 ZNF592Q92610 1267 aa21.75■■□□□ 1.07
PRKCSH-209ENST00000589838 GPKOWQ92917 476 aaPredicted RBP eCLIP21.75■■□□□ 1.07
PRKCSH-209ENST00000589838 QTRT2Q9H974 415 aaKnown RBP21.75■■□□□ 1.07
PRKCSH-209ENST00000589838 LRRC37AA6NMS7 1700 aa21.75■■□□□ 1.07
PRKCSH-209ENST00000589838 FLT1P17948 1338 aa21.75■■□□□ 1.07
PRKCSH-209ENST00000589838 VEGFAP15692 232 aaPredicted RBP21.75■■□□□ 1.07
PRKCSH-209ENST00000589838 E4F1Q66K89 784 aaPredicted RBP21.75■■□□□ 1.07
PRKCSH-209ENST00000589838 FCHSD1Q86WN1 690 aa21.75■■□□□ 1.07
PRKCSH-209ENST00000589838 KLRF2D3W0D1 207 aa21.74■■□□□ 1.07
PRKCSH-209ENST00000589838 M0R2N6 131 aa21.74■■□□□ 1.07
PRKCSH-209ENST00000589838 LAD1O00515 517 aa21.74■■□□□ 1.07
PRKCSH-209ENST00000589838 GTPBP6O43824 516 aaPredicted RBP21.74■■□□□ 1.07
PRKCSH-209ENST00000589838 PARP1P09874 1014 aaKnown RBP21.74■■□□□ 1.07
PRKCSH-209ENST00000589838 RHBDL3P58872 404 aa21.74■■□□□ 1.07
PRKCSH-209ENST00000589838 DDR1Q08345 913 aa21.74■■□□□ 1.07
PRKCSH-209ENST00000589838 E2F4Q16254 413 aa21.74■■□□□ 1.07
PRKCSH-209ENST00000589838 HEATR3Q7Z4Q2 680 aa21.74■■□□□ 1.07
PRKCSH-209ENST00000589838 C4orf32Q8N8J7 132 aa21.74■■□□□ 1.07
PRKCSH-209ENST00000589838 COA1Q9GZY4 146 aa21.74■■□□□ 1.07
PRKCSH-209ENST00000589838 TMX1Q9H3N1 280 aa21.74■■□□□ 1.07
PRKCSH-209ENST00000589838 RMND1Q9NWS8 449 aa21.74■■□□□ 1.07
PRKCSH-209ENST00000589838 FOCADQ5VW36 1801 aa21.73■■□□□ 1.07
PRKCSH-209ENST00000589838 STXBP3O00186 592 aa21.73■■□□□ 1.07
PRKCSH-209ENST00000589838 PPEF1O14829 653 aaPredicted RBP21.73■■□□□ 1.07
PRKCSH-209ENST00000589838 WWC2Q6AWC2 1192 aa21.73■■□□□ 1.07
PRKCSH-209ENST00000589838 PCDHA6Q9UN73 950 aa21.73■■□□□ 1.07
PRKCSH-209ENST00000589838 PCDHA8Q9Y5H6 950 aa21.73■■□□□ 1.07
PRKCSH-209ENST00000589838 TBX2Q13207 712 aaPredicted RBP21.73■■□□□ 1.07
PRKCSH-209ENST00000589838 SPECC1LQ69YQ0 1117 aa21.73■■□□□ 1.07
PRKCSH-209ENST00000589838 DTHD1Q6ZMT9 781 aa21.73■■□□□ 1.07
PRKCSH-209ENST00000589838 KRT27Q7Z3Y8 459 aa21.73■■□□□ 1.07
PRKCSH-209ENST00000589838 TRMT44Q8IYL2 757 aaKnown RBP21.73■■□□□ 1.07
PRKCSH-209ENST00000589838 PPP1R13BQ96KQ4 1090 aa21.73■■□□□ 1.07
PRKCSH-209ENST00000589838 CTAGE1Q96RT6 745 aa21.73■■□□□ 1.07
PRKCSH-209ENST00000589838 SYNRGQ9UMZ2 1314 aa21.72■■□□□ 1.07
PRKCSH-209ENST00000589838 SNED1Q8TER0 1413 aa21.72■■□□□ 1.07
PRKCSH-209ENST00000589838 TMEM232C9JQI7 657 aa21.72■■□□□ 1.07
PRKCSH-209ENST00000589838 CUL4BQ13620 913 aa21.72■■□□□ 1.07
PRKCSH-209ENST00000589838 PDXDC2PQ6P474 469 aa21.72■■□□□ 1.07
PRKCSH-209ENST00000589838 LTBP1Q14766 1721 aa21.72■■□□□ 1.07
PRKCSH-209ENST00000589838 CYTH3O43739 400 aa21.71■■□□□ 1.07
PRKCSH-209ENST00000589838 IL17AQ16552 155 aa21.71■■□□□ 1.07
PRKCSH-209ENST00000589838 RRP36Q96EU6 259 aaKnown RBP21.71■■□□□ 1.07
PRKCSH-209ENST00000589838 INTS13Q9NVM9 706 aa21.71■■□□□ 1.07
PRKCSH-209ENST00000589838 ATP6V0A2Q9Y487 856 aa21.71■■□□□ 1.07
PRKCSH-209ENST00000589838 GNA11P29992 359 aa21.71■■□□□ 1.07
PRKCSH-209ENST00000589838 NR1I3Q14994 352 aa21.71■■□□□ 1.07
PRKCSH-209ENST00000589838 KRT25Q7Z3Z0 450 aa21.71■■□□□ 1.07
PRKCSH-209ENST00000589838 ZMYND12Q9H0C1 365 aa21.71■■□□□ 1.07
PRKCSH-209ENST00000589838 C6orf50Q9HD87 102 aa21.71■■□□□ 1.07
PRKCSH-209ENST00000589838 SAMSN1Q9NSI8 373 aaKnown RBP21.71■■□□□ 1.07
PRKCSH-209ENST00000589838 SEC63Q9UGP8 760 aaKnown RBP21.71■■□□□ 1.07
PRKCSH-209ENST00000589838 A0A1B0GTH6 734 aa21.7■■□□□ 1.06
PRKCSH-209ENST00000589838 PPP1R3GB7ZBB8 358 aa21.7■■□□□ 1.06
PRKCSH-209ENST00000589838 ARHGAP6O43182 974 aa21.7■■□□□ 1.06
PRKCSH-209ENST00000589838 ZSCAN12O43309 604 aa21.7■■□□□ 1.06
PRKCSH-209ENST00000589838 HSPA1LP34931 641 aa21.7■■□□□ 1.06
PRKCSH-209ENST00000589838 PRPHP41219 470 aa21.7■■□□□ 1.06
PRKCSH-209ENST00000589838 NOVP48745 357 aa21.7■■□□□ 1.06
PRKCSH-209ENST00000589838 GTF2IP78347 998 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms