RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 MIGA2Q7L4E1 593 aa13.16□□□□□ -0.3
SMAD4-205ENST00000588745 SIAH1Q8IUQ4 282 aa13.16□□□□□ -0.3
SMAD4-205ENST00000588745 GMCL1P1Q8NEA9 526 aa13.16□□□□□ -0.3
SMAD4-205ENST00000588745 PIBF1Q8WXW3 757 aa13.16□□□□□ -0.3
SMAD4-205ENST00000588745 BRMS1Q9HCU9 246 aa13.16□□□□□ -0.3
SMAD4-205ENST00000588745 SH3GLB2Q9NR46 395 aa13.16□□□□□ -0.3
SMAD4-205ENST00000588745 GGA3Q9NZ52 723 aa13.16□□□□□ -0.3
SMAD4-205ENST00000588745 SCAF8Q9UPN6 1271 aaKnown RBP13.16□□□□□ -0.3
SMAD4-205ENST00000588745 BAZ2BQ9UIF8 2168 aaKnown RBP13.15□□□□□ -0.3
SMAD4-205ENST00000588745 ZC3H4Q9UPT8 1303 aaKnown RBP13.15□□□□□ -0.3
SMAD4-205ENST00000588745 BTBD18B2RXH4 712 aa13.15□□□□□ -0.3
SMAD4-205ENST00000588745 KRT2P35908 639 aa13.15□□□□□ -0.3
SMAD4-205ENST00000588745 CAP2P40123 477 aa13.15□□□□□ -0.3
SMAD4-205ENST00000588745 CCDC96Q2M329 555 aa13.15□□□□□ -0.3
SMAD4-205ENST00000588745 SLFN13Q68D06 897 aa13.15□□□□□ -0.3
SMAD4-205ENST00000588745 NOSTRINQ8IVI9 506 aa13.15□□□□□ -0.3
SMAD4-205ENST00000588745 FAM177A1Q8N128 213 aaPredicted RBP13.15□□□□□ -0.3
SMAD4-205ENST00000588745 CCDC148Q8NFR7 591 aa13.15□□□□□ -0.3
SMAD4-205ENST00000588745 GPKOWQ92917 476 aaPredicted RBP eCLIP13.15□□□□□ -0.35e-7■■■□□ 17.4
SMAD4-205ENST00000588745 RRP36Q96EU6 259 aaKnown RBP13.15□□□□□ -0.3
SMAD4-205ENST00000588745 FTOQ9C0B1 505 aaKnown RBP eCLIP13.15□□□□□ -0.3
SMAD4-205ENST00000588745 CPVLQ9H3G5 476 aa13.15□□□□□ -0.3
SMAD4-205ENST00000588745 RIOX1Q9H6W3 641 aa13.15□□□□□ -0.3
SMAD4-205ENST00000588745 ARHGEF10LQ9HCE6 1279 aa13.15□□□□□ -0.3
SMAD4-205ENST00000588745 ADARB2Q9NS39 739 aaKnown RBP13.15□□□□□ -0.3
SMAD4-205ENST00000588745 POLR3EQ9NVU0 708 aa13.15□□□□□ -0.3
SMAD4-205ENST00000588745 PPP2R3BQ9Y5P8 575 aa13.15□□□□□ -0.3
SMAD4-205ENST00000588745 DOCK1Q14185 1865 aa13.15□□□□□ -0.3
SMAD4-205ENST00000588745 PITPNM2Q9BZ72 1349 aa13.14□□□□□ -0.31
SMAD4-205ENST00000588745 hCG_1984214I3L0E3 225 aa13.14□□□□□ -0.31
SMAD4-205ENST00000588745 NASPP49321 788 aaPredicted RBP13.14□□□□□ -0.31
SMAD4-205ENST00000588745 HIRAP54198 1017 aaPredicted RBP13.14□□□□□ -0.31
SMAD4-205ENST00000588745 CEBPZQ03701 1054 aaKnown RBP13.14□□□□□ -0.31
SMAD4-205ENST00000588745 NPY5RQ15761 445 aa13.14□□□□□ -0.31
SMAD4-205ENST00000588745 GPR162Q16538 588 aa13.14□□□□□ -0.31
SMAD4-205ENST00000588745 WWC2Q6AWC2 1192 aa13.14□□□□□ -0.31
SMAD4-205ENST00000588745 ZNF713Q8N859 430 aaPredicted RBP13.14□□□□□ -0.31
SMAD4-205ENST00000588745 OXER1Q8TDS5 423 aa13.14□□□□□ -0.31
SMAD4-205ENST00000588745 HOOK2Q96ED9 719 aa13.14□□□□□ -0.31
SMAD4-205ENST00000588745 GMCL1Q96IK5 515 aa13.14□□□□□ -0.31
SMAD4-205ENST00000588745 UBA5Q9GZZ9 404 aa13.14□□□□□ -0.31
SMAD4-205ENST00000588745 GPCPD1Q9NPB8 672 aa13.14□□□□□ -0.31
SMAD4-205ENST00000588745 BARHL2Q9NY43 387 aa13.14□□□□□ -0.31
SMAD4-205ENST00000588745 RTEL1Q9NZ71 1219 aa13.14□□□□□ -0.31
SMAD4-205ENST00000588745 SEC63Q9UGP8 760 aaKnown RBP13.14□□□□□ -0.31
SMAD4-205ENST00000588745 RCOR1Q9UKL0 485 aa13.14□□□□□ -0.31
SMAD4-205ENST00000588745 A0A1W2PRG0 241 aa13.13□□□□□ -0.31
SMAD4-205ENST00000588745 PHF20L1A8MW92 1017 aa13.13□□□□□ -0.31
SMAD4-205ENST00000588745 F5H6K3 240 aa13.13□□□□□ -0.31
SMAD4-205ENST00000588745 GRIN3BO60391 1043 aa13.13□□□□□ -0.31
SMAD4-205ENST00000588745 YEATS4O95619 227 aa13.13□□□□□ -0.31
SMAD4-205ENST00000588745 NDUFB10O96000 172 aa13.13□□□□□ -0.31
SMAD4-205ENST00000588745 ASNSP08243 561 aa13.13□□□□□ -0.31
SMAD4-205ENST00000588745 VEGFAP15692 232 aaPredicted RBP13.13□□□□□ -0.31
SMAD4-205ENST00000588745 CALML3P27482 149 aa13.13□□□□□ -0.31
SMAD4-205ENST00000588745 SLC1A4P43007 532 aa13.13□□□□□ -0.31
SMAD4-205ENST00000588745 NLRP5P59047 1200 aa13.13□□□□□ -0.31
SMAD4-205ENST00000588745 KLRC3Q07444 240 aa13.13□□□□□ -0.31
SMAD4-205ENST00000588745 NR5A1Q13285 461 aa13.13□□□□□ -0.31
SMAD4-205ENST00000588745 NBPF12Q5TAG4 269 aaPredicted RBP13.13□□□□□ -0.31
SMAD4-205ENST00000588745 DCAF15Q66K64 600 aa13.13□□□□□ -0.31
SMAD4-205ENST00000588745 KCTD1Q719H9 257 aa13.13□□□□□ -0.31
SMAD4-205ENST00000588745 HEATR3Q7Z4Q2 680 aa13.13□□□□□ -0.31
SMAD4-205ENST00000588745 HOMER1Q86YM7 354 aa13.13□□□□□ -0.31
SMAD4-205ENST00000588745 PIGSQ96S52 555 aa13.13□□□□□ -0.31
SMAD4-205ENST00000588745 SH2D4AQ9H788 454 aa13.13□□□□□ -0.31
SMAD4-205ENST00000588745 GINM1Q9NU53 330 aa13.13□□□□□ -0.31
SMAD4-205ENST00000588745 SSC5DA1L4H1 1573 aa13.13□□□□□ -0.31
SMAD4-205ENST00000588745 STXBP3O00186 592 aa13.12□□□□□ -0.31
SMAD4-205ENST00000588745 RAD21O60216 631 aa13.12□□□□□ -0.31
SMAD4-205ENST00000588745 STK38Q15208 465 aa13.12□□□□□ -0.31
SMAD4-205ENST00000588745 RILPL1Q5EBL4 403 aa13.12□□□□□ -0.31
SMAD4-205ENST00000588745 ANO1Q5XXA6 986 aa13.12□□□□□ -0.31
SMAD4-205ENST00000588745 TTBK2Q6IQ55 1244 aa13.12□□□□□ -0.31
SMAD4-205ENST00000588745 TYW1BQ6NUM6 668 aa13.12□□□□□ -0.31
SMAD4-205ENST00000588745 CAVIN1Q6NZI2 390 aaKnown RBP13.12□□□□□ -0.31
SMAD4-205ENST00000588745 LINC00301Q8NCQ3 95 aa13.12□□□□□ -0.31
SMAD4-205ENST00000588745 CCDC12Q8WUD4 166 aaPredicted RBP13.12□□□□□ -0.31
SMAD4-205ENST00000588745 TNFRSF25Q93038 417 aa13.12□□□□□ -0.31
SMAD4-205ENST00000588745 L3MBTL3Q96JM7 780 aaPredicted RBP13.12□□□□□ -0.31
SMAD4-205ENST00000588745 ZNF341Q9BYN7 854 aa13.12□□□□□ -0.31
SMAD4-205ENST00000588745 GZF1Q9H116 711 aaPredicted RBP13.12□□□□□ -0.31
SMAD4-205ENST00000588745 VAT1LQ9HCJ6 419 aa13.12□□□□□ -0.31
SMAD4-205ENST00000588745 ISY1Q9ULR0 285 aaKnown RBP13.12□□□□□ -0.31
SMAD4-205ENST00000588745 TMX2Q9Y320 296 aa13.12□□□□□ -0.31
SMAD4-205ENST00000588745 CLIC4Q9Y696 253 aa13.12□□□□□ -0.31
SMAD4-205ENST00000588745 UTRNP46939 3433 aa13.11□□□□□ -0.31
SMAD4-205ENST00000588745 GOLGA6L4A6NEF3 574 aa13.11□□□□□ -0.31
SMAD4-205ENST00000588745 CTNND1O60716 968 aaKnown RBP13.11□□□□□ -0.31
SMAD4-205ENST00000588745 ECE1P42892 770 aa13.11□□□□□ -0.31
SMAD4-205ENST00000588745 NAPAP54920 295 aa13.11□□□□□ -0.31
SMAD4-205ENST00000588745 GALNT17Q6IS24 598 aa13.11□□□□□ -0.31
SMAD4-205ENST00000588745 DPY19L2Q6NUT2 758 aa13.11□□□□□ -0.31
SMAD4-205ENST00000588745 ADGRF4Q8IZF3 695 aa13.11□□□□□ -0.31
SMAD4-205ENST00000588745 DAGLBQ8NCG7 672 aa13.11□□□□□ -0.31
SMAD4-205ENST00000588745 KCNG4Q8TDN1 519 aa13.11□□□□□ -0.31
SMAD4-205ENST00000588745 ACER1Q8TDN7 264 aa13.11□□□□□ -0.31
SMAD4-205ENST00000588745 MTMR8Q96EF0 704 aa13.11□□□□□ -0.31
SMAD4-205ENST00000588745 PGBD1Q96JS3 809 aa13.11□□□□□ -0.31
SMAD4-205ENST00000588745 JMJD4Q9H9V9 463 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms