RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 CTR9Q6PD62 1173 aa16.45■□□□□ 0.22
HDAC5-208ENST00000588419 SIAH1Q8IUQ4 282 aa16.45■□□□□ 0.22
HDAC5-208ENST00000588419 MMP19Q99542 508 aa16.45■□□□□ 0.22
HDAC5-208ENST00000588419 LBHD1Q9BQE6 289 aaPredicted RBP16.45■□□□□ 0.22
HDAC5-208ENST00000588419 MROH8Q9H579 483 aa16.45■□□□□ 0.22
HDAC5-208ENST00000588419 GOPCQ9HD26 462 aa16.45■□□□□ 0.22
HDAC5-208ENST00000588419 ARPP21Q9UBL0 812 aaPredicted RBP16.45■□□□□ 0.22
HDAC5-208ENST00000588419 PRKAG2Q9UGJ0 569 aa16.45■□□□□ 0.22
HDAC5-208ENST00000588419 ATP11BQ9Y2G3 1177 aa16.45■□□□□ 0.22
HDAC5-208ENST00000588419 MINDY4BA8MYZ0 360 aa16.44■□□□□ 0.22
HDAC5-208ENST00000588419 STRNO43815 780 aa16.44■□□□□ 0.22
HDAC5-208ENST00000588419 FCER1AP12319 257 aa16.44■□□□□ 0.22
HDAC5-208ENST00000588419 SLC4A3P48751 1232 aa16.44■□□□□ 0.22
HDAC5-208ENST00000588419 RTP1P59025 263 aa16.44■□□□□ 0.22
HDAC5-208ENST00000588419 TMEM132BQ14DG7 1078 aa16.44■□□□□ 0.22
HDAC5-208ENST00000588419 OLFML2BQ68BL8 750 aa16.44■□□□□ 0.22
HDAC5-208ENST00000588419 DEFB123Q8N688 67 aa16.44■□□□□ 0.22
HDAC5-208ENST00000588419 GPATCH3Q96I76 525 aa16.44■□□□□ 0.22
HDAC5-208ENST00000588419 PRDM5Q9NQX1 630 aaPredicted RBP16.44■□□□□ 0.22
HDAC5-208ENST00000588419 ECHDC1Q9NTX5 307 aa16.44■□□□□ 0.22
HDAC5-208ENST00000588419 LAMA3Q16787 3333 aa16.44■□□□□ 0.22
HDAC5-208ENST00000588419 PGK2P07205 417 aa16.43■□□□□ 0.22
HDAC5-208ENST00000588419 SLC17A8Q8NDX2 589 aa16.43■□□□□ 0.22
HDAC5-208ENST00000588419 MAML3Q96JK9 1138 aa16.43■□□□□ 0.22
HDAC5-208ENST00000588419 NUP88Q99567 741 aaPredicted RBP16.43■□□□□ 0.22
HDAC5-208ENST00000588419 KANSL2Q9H9L4 492 aa16.43■□□□□ 0.22
HDAC5-208ENST00000588419 MKNK2Q9HBH9 465 aa16.43■□□□□ 0.22
HDAC5-208ENST00000588419 SEPT4O43236 478 aa16.42■□□□□ 0.22
HDAC5-208ENST00000588419 TDO2P48775 406 aa16.42■□□□□ 0.22
HDAC5-208ENST00000588419 FAM47AQ5JRC9 791 aa16.42■□□□□ 0.22
HDAC5-208ENST00000588419 ARRDC4Q8NCT1 418 aa16.42■□□□□ 0.22
HDAC5-208ENST00000588419 FERMT2Q96AC1 680 aa16.42■□□□□ 0.22
HDAC5-208ENST00000588419 SLC25A27O95847 323 aa16.41■□□□□ 0.22
HDAC5-208ENST00000588419 APPP05067 770 aa16.41■□□□□ 0.22
HDAC5-208ENST00000588419 KCTD2Q14681 263 aa16.41■□□□□ 0.22
HDAC5-208ENST00000588419 LRIT3Q3SXY7 679 aa16.41■□□□□ 0.22
HDAC5-208ENST00000588419 STRBPQ96SI9 672 aaKnown RBP16.41■□□□□ 0.22
HDAC5-208ENST00000588419 PPP1R9AQ9ULJ8 1098 aa16.41■□□□□ 0.22
HDAC5-208ENST00000588419 ISY1Q9ULR0 285 aaKnown RBP16.41■□□□□ 0.22
HDAC5-208ENST00000588419 TRIM60Q495X7 471 aa16.4■□□□□ 0.22
HDAC5-208ENST00000588419 ABRAQ8N0Z2 381 aa16.4■□□□□ 0.22
HDAC5-208ENST00000588419 KBTBD3Q8NAB2 608 aa16.4■□□□□ 0.22
HDAC5-208ENST00000588419 APPBP2Q92624 585 aa16.4■□□□□ 0.22
HDAC5-208ENST00000588419 CTDP1Q9Y5B0 961 aaPredicted RBP16.4■□□□□ 0.22
HDAC5-208ENST00000588419 GSG1L2A8MUP6 293 aa16.39■□□□□ 0.21
HDAC5-208ENST00000588419 M0R2C6 588 aa16.39■□□□□ 0.21
HDAC5-208ENST00000588419 VWA5AO00534 786 aa16.39■□□□□ 0.21
HDAC5-208ENST00000588419 RNF113AO15541 343 aaKnown RBP16.39■□□□□ 0.21
HDAC5-208ENST00000588419 GPAA1O43292 621 aa16.39■□□□□ 0.21
HDAC5-208ENST00000588419 PRDM1O75626 825 aa16.39■□□□□ 0.21
HDAC5-208ENST00000588419 RASA1P20936 1047 aa16.39■□□□□ 0.21
HDAC5-208ENST00000588419 STAT3P40763 770 aa16.39■□□□□ 0.21
HDAC5-208ENST00000588419 ADCYAP1R1P41586 468 aa16.39■□□□□ 0.21
HDAC5-208ENST00000588419 SLC39A5Q6ZMH5 540 aa16.39■□□□□ 0.21
HDAC5-208ENST00000588419 RIOX2Q8IUF8 465 aa16.39■□□□□ 0.21
HDAC5-208ENST00000588419 OSBP2Q969R2 916 aa16.39■□□□□ 0.21
HDAC5-208ENST00000588419 LENG1Q96BZ8 264 aaPredicted RBP16.39■□□□□ 0.21
HDAC5-208ENST00000588419 SLF1Q9BQI6 1058 aa16.39■□□□□ 0.21
HDAC5-208ENST00000588419 DNAH12Q6ZR08 3092 aa16.39■□□□□ 0.21
HDAC5-208ENST00000588419 IGHA2P01877 340 aa16.38■□□□□ 0.21
HDAC5-208ENST00000588419 RARBP10826 455 aa16.38■□□□□ 0.21
HDAC5-208ENST00000588419 LRRC41Q15345 812 aa16.38■□□□□ 0.21
HDAC5-208ENST00000588419 SNRNP48Q6IEG0 339 aaKnown RBP16.38■□□□□ 0.21
HDAC5-208ENST00000588419 CPXCR1Q8N123 301 aa16.38■□□□□ 0.21
HDAC5-208ENST00000588419 CHMP4CQ96CF2 233 aa16.38■□□□□ 0.21
HDAC5-208ENST00000588419 FAM161BQ96MY7 647 aa16.38■□□□□ 0.21
HDAC5-208ENST00000588419 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.38■□□□□ 0.21
HDAC5-208ENST00000588419 EPB41L4AQ9HCS5 686 aaPredicted RBP16.38■□□□□ 0.21
HDAC5-208ENST00000588419 XPNPEP3Q9NQH7 507 aa16.38■□□□□ 0.21
HDAC5-208ENST00000588419 ZNF214Q9UL59 606 aaPredicted RBP16.38■□□□□ 0.21
HDAC5-208ENST00000588419 ROBO3Q96MS0 1386 aa16.38■□□□□ 0.21
HDAC5-208ENST00000588419 NDUFB10O96000 172 aa16.37■□□□□ 0.21
HDAC5-208ENST00000588419 PGK1P00558 417 aa16.37■□□□□ 0.21
HDAC5-208ENST00000588419 TAL1P17542 331 aaPredicted RBP16.37■□□□□ 0.21
HDAC5-208ENST00000588419 SBK1Q52WX2 424 aa16.37■□□□□ 0.21
HDAC5-208ENST00000588419 ZNF444Q8N0Y2 327 aaPredicted RBP16.37■□□□□ 0.21
HDAC5-208ENST00000588419 LRRC47Q8N1G4 583 aaKnown RBP16.37■□□□□ 0.21
HDAC5-208ENST00000588419 KIFC2Q96AC6 838 aa16.37■□□□□ 0.21
HDAC5-208ENST00000588419 FSD1Q9BTV5 496 aa16.37■□□□□ 0.21
HDAC5-208ENST00000588419 CLIP2Q9UDT6 1046 aa16.37■□□□□ 0.21
HDAC5-208ENST00000588419 F5H6K3 240 aa16.36■□□□□ 0.21
HDAC5-208ENST00000588419 COPB2P35606 906 aa16.36■□□□□ 0.21
HDAC5-208ENST00000588419 KLRC3Q07444 240 aa16.36■□□□□ 0.21
HDAC5-208ENST00000588419 GPR153Q6NV75 609 aa16.36■□□□□ 0.21
HDAC5-208ENST00000588419 REPS2Q8NFH8 660 aa16.36■□□□□ 0.21
HDAC5-208ENST00000588419 DDX11Q96FC9 970 aa16.36■□□□□ 0.21
HDAC5-208ENST00000588419 TINF2Q9BSI4 451 aa16.36■□□□□ 0.21
HDAC5-208ENST00000588419 DCTPP1Q9H773 170 aa16.36■□□□□ 0.21
HDAC5-208ENST00000588419 ZHX1Q9UKY1 873 aaPredicted RBP16.36■□□□□ 0.21
HDAC5-208ENST00000588419 ADAMTS5Q9UNA0 930 aa16.36■□□□□ 0.21
HDAC5-208ENST00000588419 CNPY2Q9Y2B0 182 aa16.36■□□□□ 0.21
HDAC5-208ENST00000588419 ZFYP08048 801 aaPredicted RBP16.35■□□□□ 0.21
HDAC5-208ENST00000588419 GNAT2P19087 354 aa16.35■□□□□ 0.21
HDAC5-208ENST00000588419 ZNF792Q3KQV3 632 aa16.35■□□□□ 0.21
HDAC5-208ENST00000588419 GIMAP6Q6P9H5 292 aa16.35■□□□□ 0.21
HDAC5-208ENST00000588419 RNF180Q86T96 592 aa16.35■□□□□ 0.21
HDAC5-208ENST00000588419 BADQ92934 168 aa16.35■□□□□ 0.21
HDAC5-208ENST00000588419 CEP95Q96GE4 821 aa16.35■□□□□ 0.21
HDAC5-208ENST00000588419 SEC62Q99442 399 aaKnown RBP16.35■□□□□ 0.21
HDAC5-208ENST00000588419 TEX13BQ9BXU2 312 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms