RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 USP17L18D6R9N7 530 aa20.32■□□□□ 0.84
DNMT1-212ENST00000587197 USP17L22D6RA61 530 aa20.32■□□□□ 0.84
DNMT1-212ENST00000587197 USP17L17D6RBQ6 530 aa20.32■□□□□ 0.84
DNMT1-212ENST00000587197 USP17L19D6RCP7 530 aa20.32■□□□□ 0.84
DNMT1-212ENST00000587197 USP17L20D6RJB6 530 aa20.32■□□□□ 0.84
DNMT1-212ENST00000587197 NMT2O60551 498 aa20.32■□□□□ 0.84
DNMT1-212ENST00000587197 ZKSCAN1P17029 563 aaPredicted RBP20.32■□□□□ 0.84
DNMT1-212ENST00000587197 VCAM1P19320 739 aa20.32■□□□□ 0.84
DNMT1-212ENST00000587197 USP17L24Q0WX57 530 aa20.32■□□□□ 0.84
DNMT1-212ENST00000587197 IRF5Q13568 498 aa20.32■□□□□ 0.84
DNMT1-212ENST00000587197 ZYXQ15942 572 aaKnown RBP20.32■□□□□ 0.84
DNMT1-212ENST00000587197 RALYLQ86SE5 291 aaKnown RBP20.32■□□□□ 0.84
DNMT1-212ENST00000587197 GMCL1P1Q8NEA9 526 aa20.32■□□□□ 0.84
DNMT1-212ENST00000587197 GPRC5AQ8NFJ5 357 aa20.32■□□□□ 0.84
DNMT1-212ENST00000587197 GABRQQ9UN88 632 aa20.32■□□□□ 0.84
DNMT1-212ENST00000587197 STX8Q9UNK0 236 aa20.32■□□□□ 0.84
DNMT1-212ENST00000587197 RBBP6Q7Z6E9 1792 aaKnown RBP20.31■□□□□ 0.84
DNMT1-212ENST00000587197 WDR46O15213 610 aaKnown RBP20.31■□□□□ 0.84
DNMT1-212ENST00000587197 ADCY3O60266 1144 aa20.31■□□□□ 0.84
DNMT1-212ENST00000587197 MYCP01106 439 aaPredicted RBP20.31■□□□□ 0.84
DNMT1-212ENST00000587197 KRT32Q14532 448 aa20.31■□□□□ 0.84
DNMT1-212ENST00000587197 RCSD1Q6JBY9 416 aa20.31■□□□□ 0.84
DNMT1-212ENST00000587197 CCAR1Q8IX12 1150 aaKnown RBP20.31■□□□□ 0.84
DNMT1-212ENST00000587197 MB21D2Q8IYB1 491 aaPredicted RBP20.31■□□□□ 0.84
DNMT1-212ENST00000587197 PXYLP1Q8TE99 480 aa20.31■□□□□ 0.84
DNMT1-212ENST00000587197 MTA3Q9BTC8 594 aa20.31■□□□□ 0.84
DNMT1-212ENST00000587197 F5H6K3 240 aa20.3■□□□□ 0.84
DNMT1-212ENST00000587197 TOP1P11387 765 aaKnown RBP20.3■□□□□ 0.84
DNMT1-212ENST00000587197 EN2P19622 333 aaPredicted RBP20.3■□□□□ 0.84
DNMT1-212ENST00000587197 KLRC3Q07444 240 aa20.3■□□□□ 0.84
DNMT1-212ENST00000587197 C8orf34Q49A92 452 aa20.3■□□□□ 0.84
DNMT1-212ENST00000587197 KIAA1755Q5JYT7 1200 aa20.3■□□□□ 0.84
DNMT1-212ENST00000587197 RASEFQ8IZ41 740 aa20.3■□□□□ 0.84
DNMT1-212ENST00000587197 ZSCAN10Q96SZ4 725 aaPredicted RBP20.3■□□□□ 0.84
DNMT1-212ENST00000587197 CATSPERGQ6ZRH7 1159 aa20.29■□□□□ 0.84
DNMT1-212ENST00000587197 CYB5R4Q7L1T6 521 aa20.29■□□□□ 0.84
DNMT1-212ENST00000587197 UBAC1Q9BSL1 405 aa20.29■□□□□ 0.84
DNMT1-212ENST00000587197 RPAP3Q9H6T3 665 aaPredicted RBP20.29■□□□□ 0.84
DNMT1-212ENST00000587197 NDUFB10O96000 172 aa20.28■□□□□ 0.84
DNMT1-212ENST00000587197 MAPK4P31152 587 aa20.28■□□□□ 0.84
DNMT1-212ENST00000587197 TMEM47Q9BQJ4 181 aa20.28■□□□□ 0.84
DNMT1-212ENST00000587197 RABGAP1Q9Y3P9 1069 aa20.28■□□□□ 0.84
DNMT1-212ENST00000587197 TNKSO95271 1327 aa20.27■□□□□ 0.84
DNMT1-212ENST00000587197 MCCP23508 829 aa20.27■□□□□ 0.84
DNMT1-212ENST00000587197 MCM5P33992 734 aa20.27■□□□□ 0.84
DNMT1-212ENST00000587197 ERVK-9P63128 1117 aa20.27■□□□□ 0.84
DNMT1-212ENST00000587197 ERVK-24P63145 666 aa20.27■□□□□ 0.84
DNMT1-212ENST00000587197 CCNA1P78396 465 aa20.27■□□□□ 0.84
DNMT1-212ENST00000587197 SART3Q15020 963 aaKnown RBP20.27■□□□□ 0.84
DNMT1-212ENST00000587197 MTFR1Q15390 333 aa20.27■□□□□ 0.84
DNMT1-212ENST00000587197 SEC23AQ15436 765 aa20.27■□□□□ 0.84
DNMT1-212ENST00000587197 SPICE1Q8N0Z3 855 aa20.27■□□□□ 0.84
DNMT1-212ENST00000587197 LRRC47Q8N1G4 583 aaKnown RBP20.27■□□□□ 0.84
DNMT1-212ENST00000587197 ENAHQ8N8S7 591 aaPredicted RBP20.27■□□□□ 0.84
DNMT1-212ENST00000587197 GMCL1Q96IK5 515 aa20.27■□□□□ 0.84
DNMT1-212ENST00000587197 NEK1Q96PY6 1258 aa20.27■□□□□ 0.84
DNMT1-212ENST00000587197 ZKSCAN3Q9BRR0 538 aa20.27■□□□□ 0.84
DNMT1-212ENST00000587197 PAGR1Q9BTK6 254 aa20.27■□□□□ 0.84
DNMT1-212ENST00000587197 RNF208Q9H0X6 261 aa20.27■□□□□ 0.84
DNMT1-212ENST00000587197 CWC22Q9HCG8 908 aaKnown RBP20.27■□□□□ 0.84
DNMT1-212ENST00000587197 RBPJLQ9UBG7 517 aa20.27■□□□□ 0.84
DNMT1-212ENST00000587197 HMGB1P09429 215 aaKnown RBP20.26■□□□□ 0.83
DNMT1-212ENST00000587197 CCL5P13501 91 aa20.26■□□□□ 0.83
DNMT1-212ENST00000587197 CAPN2P17655 700 aa20.26■□□□□ 0.83
DNMT1-212ENST00000587197 ANTXR2P58335 489 aa20.26■□□□□ 0.83
DNMT1-212ENST00000587197 SLFN13Q68D06 897 aa20.26■□□□□ 0.83
DNMT1-212ENST00000587197 LBX2Q6XYB7 198 aa20.26■□□□□ 0.83
DNMT1-212ENST00000587197 TXNRD2Q9NNW7 524 aa20.26■□□□□ 0.83
DNMT1-212ENST00000587197 HOXC10Q9NYD6 342 aa20.26■□□□□ 0.83
DNMT1-212ENST00000587197 SNX14Q9Y5W7 946 aa20.26■□□□□ 0.83
DNMT1-212ENST00000587197 KIAA0100Q14667 2235 aaKnown RBP20.26■□□□□ 0.83
DNMT1-212ENST00000587197 WDR19Q8NEZ3 1342 aa20.26■□□□□ 0.83
DNMT1-212ENST00000587197 GJB1P08034 283 aa20.25■□□□□ 0.83
DNMT1-212ENST00000587197 COG2Q14746 738 aa20.25■□□□□ 0.83
DNMT1-212ENST00000587197 IGDCC4Q8TDY8 1250 aa20.25■□□□□ 0.83
DNMT1-212ENST00000587197 SOCS4Q8WXH5 440 aa20.25■□□□□ 0.83
DNMT1-212ENST00000587197 TMEM87BQ96K49 555 aa20.25■□□□□ 0.83
DNMT1-212ENST00000587197 NUDT12Q9BQG2 462 aa20.25■□□□□ 0.83
DNMT1-212ENST00000587197 ERICH2A1L162 156 aa20.24■□□□□ 0.83
DNMT1-212ENST00000587197 IFIT3O14879 490 aaKnown RBP20.24■□□□□ 0.83
DNMT1-212ENST00000587197 PLA2G6O60733 806 aa20.24■□□□□ 0.83
DNMT1-212ENST00000587197 INHAP05111 366 aa20.24■□□□□ 0.83
DNMT1-212ENST00000587197 ELNP15502 786 aa20.24■□□□□ 0.83
DNMT1-212ENST00000587197 ADCK5Q3MIX3 580 aa20.24■□□□□ 0.83
DNMT1-212ENST00000587197 IFIT1BQ5T764 474 aaKnown RBP20.24■□□□□ 0.83
DNMT1-212ENST00000587197 DHX32Q7L7V1 743 aaKnown RBP20.24■□□□□ 0.83
DNMT1-212ENST00000587197 DCAF4Q8WV16 495 aa20.24■□□□□ 0.83
DNMT1-212ENST00000587197 TANGO6Q9C0B7 1094 aa20.24■□□□□ 0.83
DNMT1-212ENST00000587197 GJD2Q9UKL4 321 aa20.24■□□□□ 0.83
DNMT1-212ENST00000587197 PRC1O43663 620 aa20.23■□□□□ 0.83
DNMT1-212ENST00000587197 RAD21O60216 631 aa20.23■□□□□ 0.83
DNMT1-212ENST00000587197 SNHG28P0DPA3 235 aa20.23■□□□□ 0.83
DNMT1-212ENST00000587197 BMP3P12645 472 aa20.23■□□□□ 0.83
DNMT1-212ENST00000587197 PSMA5P28066 241 aa20.23■□□□□ 0.83
DNMT1-212ENST00000587197 SLC1A4P43007 532 aa20.23■□□□□ 0.83
DNMT1-212ENST00000587197 GJA8P48165 433 aa20.23■□□□□ 0.83
DNMT1-212ENST00000587197 ANAPC15P60006 121 aa20.23■□□□□ 0.83
DNMT1-212ENST00000587197 EXOSC10Q01780 885 aaKnown RBP20.23■□□□□ 0.83
DNMT1-212ENST00000587197 Q3C1V9 767 aa20.23■□□□□ 0.83
DNMT1-212ENST00000587197 FAM83BQ5T0W9 1011 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms