RNA–Protein interactions for RNA: ENST00000585838.2

POLR2E-202, Transcript of RNA polymerase II subunit E, humanhuman

TSL 5

Gene POLR2E, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-202ENST00000585838 RBM46Q8TBY0 533 aaKnown RBP12.36□□□□□ -0.43
POLR2E-202ENST00000585838 AIFM3Q96NN9 605 aa12.36□□□□□ -0.43
POLR2E-202ENST00000585838 WDR18Q9BV38 432 aa12.36□□□□□ -0.43
POLR2E-202ENST00000585838 VCPKMTQ9H867 229 aa12.36□□□□□ -0.43
POLR2E-202ENST00000585838 SMC3Q9UQE7 1217 aa12.36□□□□□ -0.43
POLR2E-202ENST00000585838 PASKQ96RG2 1323 aa12.36□□□□□ -0.43
POLR2E-202ENST00000585838 PTPDC1A2A3K4 754 aa12.35□□□□□ -0.43
POLR2E-202ENST00000585838 PALM3A6NDB9 673 aaPredicted RBP12.35□□□□□ -0.43
POLR2E-202ENST00000585838 CALM1P0DP23 149 aa12.35□□□□□ -0.43
POLR2E-202ENST00000585838 CALM2P0DP24 149 aa12.35□□□□□ -0.43
POLR2E-202ENST00000585838 CALM3P0DP25 149 aa12.35□□□□□ -0.43
POLR2E-202ENST00000585838 BMP3P12645 472 aa12.35□□□□□ -0.43
POLR2E-202ENST00000585838 TAL1P17542 331 aaPredicted RBP12.35□□□□□ -0.43
POLR2E-202ENST00000585838 GJB2P29033 226 aa12.35□□□□□ -0.43
POLR2E-202ENST00000585838 NT5C2P49902 561 aa12.35□□□□□ -0.43
POLR2E-202ENST00000585838 ZNF157P51786 506 aaPredicted RBP12.35□□□□□ -0.43
POLR2E-202ENST00000585838 BACE1P56817 501 aa12.35□□□□□ -0.43
POLR2E-202ENST00000585838 HTRA3P83110 453 aa12.35□□□□□ -0.43
POLR2E-202ENST00000585838 SSRP1Q08945 709 aaKnown RBP12.35□□□□□ -0.43
POLR2E-202ENST00000585838 ZNF543Q08ER8 600 aa12.35□□□□□ -0.43
POLR2E-202ENST00000585838 PPP4R3BQ5MIZ7 849 aa12.35□□□□□ -0.43
POLR2E-202ENST00000585838 OTUD7BQ6GQQ9 843 aa12.35□□□□□ -0.43
POLR2E-202ENST00000585838 TMTC3Q6ZXV5 915 aa12.35□□□□□ -0.43
POLR2E-202ENST00000585838 ERO1BQ86YB8 467 aa12.35□□□□□ -0.43
POLR2E-202ENST00000585838 HOMER1Q86YM7 354 aa12.35□□□□□ -0.43
POLR2E-202ENST00000585838 NSUN7Q8NE18 718 aaKnown RBP12.35□□□□□ -0.43
POLR2E-202ENST00000585838 KIFC2Q96AC6 838 aa12.35□□□□□ -0.43
POLR2E-202ENST00000585838 GOPCQ9HD26 462 aa12.35□□□□□ -0.43
POLR2E-202ENST00000585838 GJB4Q9NTQ9 266 aa12.35□□□□□ -0.43
POLR2E-202ENST00000585838 FBXO28Q9NVF7 368 aa12.35□□□□□ -0.43
POLR2E-202ENST00000585838 SPDYE5A6NIY4 337 aa12.34□□□□□ -0.43
POLR2E-202ENST00000585838 FDPSP14324 419 aaKnown RBP12.34□□□□□ -0.43
POLR2E-202ENST00000585838 KIF5BP33176 963 aa12.34□□□□□ -0.43
POLR2E-202ENST00000585838 GUCY1B3Q02153 619 aa12.34□□□□□ -0.43
POLR2E-202ENST00000585838 PPATQ06203 517 aa12.34□□□□□ -0.43
POLR2E-202ENST00000585838 NTRK3Q16288 839 aa12.34□□□□□ -0.43
POLR2E-202ENST00000585838 TREML2Q5T2D2 321 aa12.34□□□□□ -0.43
POLR2E-202ENST00000585838 GMCL1P1Q8NEA9 526 aa12.34□□□□□ -0.43
POLR2E-202ENST00000585838 DCAF4Q8WV16 495 aa12.34□□□□□ -0.43
POLR2E-202ENST00000585838 WNK4Q96J92 1243 aa12.34□□□□□ -0.43
POLR2E-202ENST00000585838 TANGO6Q9C0B7 1094 aa12.34□□□□□ -0.43
POLR2E-202ENST00000585838 KIAA1683Q9H0B3 1180 aa12.34□□□□□ -0.43
POLR2E-202ENST00000585838 RPAP3Q9H6T3 665 aaPredicted RBP12.34□□□□□ -0.43
POLR2E-202ENST00000585838 SH2D4AQ9H788 454 aa12.34□□□□□ -0.43
POLR2E-202ENST00000585838 GINM1Q9NU53 330 aa12.34□□□□□ -0.43
POLR2E-202ENST00000585838 TMOD4Q9NZQ9 345 aa12.34□□□□□ -0.43
POLR2E-202ENST00000585838 ORC3Q9UBD5 711 aaPredicted RBP12.34□□□□□ -0.43
POLR2E-202ENST00000585838 TMEM88BA6NKF7 163 aa12.33□□□□□ -0.44
POLR2E-202ENST00000585838 CYTH3O43739 400 aa12.33□□□□□ -0.44
POLR2E-202ENST00000585838 PEX10O60683 326 aa12.33□□□□□ -0.44
POLR2E-202ENST00000585838 FKBP1BP68106 108 aa12.33□□□□□ -0.44
POLR2E-202ENST00000585838 CCDC174Q6PII3 467 aa12.33□□□□□ -0.44
POLR2E-202ENST00000585838 CPLX2Q6PUV4 134 aaKnown RBP12.33□□□□□ -0.44
POLR2E-202ENST00000585838 ADGRF4Q8IZF3 695 aa12.33□□□□□ -0.44
POLR2E-202ENST00000585838 FAM184AQ8NB25 1140 aa12.33□□□□□ -0.44
POLR2E-202ENST00000585838 PIGSQ96S52 555 aa12.33□□□□□ -0.44
POLR2E-202ENST00000585838 RBM28Q9NW13 759 aaKnown RBP12.33□□□□□ -0.44
POLR2E-202ENST00000585838 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.33□□□□□ -0.44
POLR2E-202ENST00000585838 CCDC196A0A1B0GTZ2 297 aa12.32□□□□□ -0.44
POLR2E-202ENST00000585838 SNHG28P0DPA3 235 aa12.32□□□□□ -0.44
POLR2E-202ENST00000585838 VCAM1P19320 739 aa12.32□□□□□ -0.44
POLR2E-202ENST00000585838 AKAP17AQ02040 695 aaKnown RBP12.32□□□□□ -0.44
POLR2E-202ENST00000585838 FUT2Q10981 343 aa12.32□□□□□ -0.44
POLR2E-202ENST00000585838 PPIL2Q13356 520 aa12.32□□□□□ -0.44
POLR2E-202ENST00000585838 ASPRV1Q53RT3 343 aa12.32□□□□□ -0.44
POLR2E-202ENST00000585838 RGMBQ6NW40 437 aa12.32□□□□□ -0.44
POLR2E-202ENST00000585838 SAPCD2Q86UD0 394 aa12.32□□□□□ -0.44
POLR2E-202ENST00000585838 GPKOWQ92917 476 aaPredicted RBP eCLIP12.32□□□□□ -0.44
POLR2E-202ENST00000585838 GMCL1Q96IK5 515 aa12.32□□□□□ -0.44
POLR2E-202ENST00000585838 C19orf81C9J6K1 198 aa12.31□□□□□ -0.44
POLR2E-202ENST00000585838 CXCL11O14625 94 aa12.31□□□□□ -0.44
POLR2E-202ENST00000585838 FMNL1O95466 1100 aaPredicted RBP12.31□□□□□ -0.44
POLR2E-202ENST00000585838 IFNAR1P17181 557 aa12.31□□□□□ -0.44
POLR2E-202ENST00000585838 GNAQP50148 359 aa12.31□□□□□ -0.44
POLR2E-202ENST00000585838 USP14P54578 494 aa12.31□□□□□ -0.44
POLR2E-202ENST00000585838 FSTL1Q12841 308 aa12.31□□□□□ -0.44
POLR2E-202ENST00000585838 SYDE2Q5VT97 1194 aa12.31□□□□□ -0.44
POLR2E-202ENST00000585838 SPRYD7Q5W111 196 aa12.31□□□□□ -0.44
POLR2E-202ENST00000585838 CYP4F22Q6NT55 531 aa12.31□□□□□ -0.44
POLR2E-202ENST00000585838 SMARCC2Q8TAQ2 1214 aa12.31□□□□□ -0.44
POLR2E-202ENST00000585838 COA7Q96BR5 231 aa12.31□□□□□ -0.44
POLR2E-202ENST00000585838 ZIC5Q96T25 663 aa12.31□□□□□ -0.44
POLR2E-202ENST00000585838 ALG1Q9BT22 464 aa12.31□□□□□ -0.44
POLR2E-202ENST00000585838 JMJD4Q9H9V9 463 aa12.31□□□□□ -0.44
POLR2E-202ENST00000585838 PRR12Q9ULL5 1215 aa12.31□□□□□ -0.44
POLR2E-202ENST00000585838 TLL2Q9Y6L7 1015 aa12.31□□□□□ -0.44
POLR2E-202ENST00000585838 CCL15-CCL14A0A0B4J2E2 113 aa12.3□□□□□ -0.44
POLR2E-202ENST00000585838 PRPF3O43395 683 aaKnown RBP12.3□□□□□ -0.44
POLR2E-202ENST00000585838 FLOT1O75955 427 aa12.3□□□□□ -0.44
POLR2E-202ENST00000585838 ECM2O94769 699 aaPredicted RBP12.3□□□□□ -0.44
POLR2E-202ENST00000585838 SNAPC2Q13487 334 aa12.3□□□□□ -0.44
POLR2E-202ENST00000585838 PKP1Q13835 747 aa12.3□□□□□ -0.44
POLR2E-202ENST00000585838 PKN1Q16512 942 aa12.3□□□□□ -0.44
POLR2E-202ENST00000585838 CCL15Q16663 113 aa12.3□□□□□ -0.44
POLR2E-202ENST00000585838 FOXD4L6Q3SYB3 417 aaPredicted RBP12.3□□□□□ -0.44
POLR2E-202ENST00000585838 LARP1BQ659C4 914 aaKnown RBP12.3□□□□□ -0.44
POLR2E-202ENST00000585838 FOXD4L3Q6VB84 417 aaPredicted RBP12.3□□□□□ -0.44
POLR2E-202ENST00000585838 RASAL3Q86YV0 1011 aa12.3□□□□□ -0.44
POLR2E-202ENST00000585838 TRIM22Q8IYM9 498 aa12.3□□□□□ -0.44
POLR2E-202ENST00000585838 IL27Q8NEV9 243 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms