RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 PLCD1P51178 756 aa12.41□□□□□ -0.42
GGA3-219ENST00000584550 KIAA1755Q5JYT7 1200 aa12.41□□□□□ -0.42
GGA3-219ENST00000584550 MICALL1Q8N3F8 863 aa12.41□□□□□ -0.42
GGA3-219ENST00000584550 SHCBP1Q8NEM2 672 aa12.41□□□□□ -0.42
GGA3-219ENST00000584550 DBNDD2Q9BQY9 259 aa12.41□□□□□ -0.42
GGA3-219ENST00000584550 MROH8Q9H579 483 aa12.41□□□□□ -0.42
GGA3-219ENST00000584550 STARD7Q9NQZ5 370 aa12.41□□□□□ -0.42
GGA3-219ENST00000584550 GNAI2P04899 355 aa12.4□□□□□ -0.42
GGA3-219ENST00000584550 CSF2RAP15509 400 aa12.4□□□□□ -0.42
GGA3-219ENST00000584550 ACLYP53396 1101 aa12.4□□□□□ -0.42
GGA3-219ENST00000584550 TFF2Q03403 129 aa12.4□□□□□ -0.42
GGA3-219ENST00000584550 EVX2Q03828 476 aa12.4□□□□□ -0.42
GGA3-219ENST00000584550 CCDC158Q5M9N0 1113 aa12.4□□□□□ -0.42
GGA3-219ENST00000584550 TMEM240Q5SV17 173 aa12.4□□□□□ -0.42
GGA3-219ENST00000584550 ANKRD33Q7Z3H0 272 aa12.4□□□□□ -0.42
GGA3-219ENST00000584550 TTC6Q86TZ1 520 aa12.4□□□□□ -0.42
GGA3-219ENST00000584550 SPICE1Q8N0Z3 855 aa12.4□□□□□ -0.42
GGA3-219ENST00000584550 ATG4CQ96DT6 458 aa12.4□□□□□ -0.42
GGA3-219ENST00000584550 C1orf115Q9H7X2 142 aa12.4□□□□□ -0.42
GGA3-219ENST00000584550 PNMA6EA0A0J9YXQ4 647 aa12.39□□□□□ -0.43
GGA3-219ENST00000584550 APBB1O00213 710 aa12.39□□□□□ -0.43
GGA3-219ENST00000584550 IDH1O75874 414 aaKnown RBP12.39□□□□□ -0.43
GGA3-219ENST00000584550 FLOT1O75955 427 aa12.39□□□□□ -0.43
GGA3-219ENST00000584550 MS4A1P11836 297 aa12.39□□□□□ -0.43
GGA3-219ENST00000584550 DSG3P32926 999 aa12.39□□□□□ -0.43
GGA3-219ENST00000584550 MFSD5Q6N075 450 aa12.39□□□□□ -0.43
GGA3-219ENST00000584550 ZNF365Q70YC5 407 aa12.39□□□□□ -0.43
GGA3-219ENST00000584550 MAGEB6Q8N7X4 407 aa12.39□□□□□ -0.43
GGA3-219ENST00000584550 VTI1AQ96AJ9 217 aa12.39□□□□□ -0.43
GGA3-219ENST00000584550 TOX2Q96NM4 488 aa12.39□□□□□ -0.43
GGA3-219ENST00000584550 MMP19Q99542 508 aa12.39□□□□□ -0.43
GGA3-219ENST00000584550 TINF2Q9BSI4 451 aa12.39□□□□□ -0.43
GGA3-219ENST00000584550 C1QTNF1Q9BXJ1 281 aa12.39□□□□□ -0.43
GGA3-219ENST00000584550 PPP1R12CQ9BZL4 782 aa12.39□□□□□ -0.43
GGA3-219ENST00000584550 EHD4Q9H223 541 aa12.39□□□□□ -0.43
GGA3-219ENST00000584550 NKX2-4Q9H2Z4 354 aa12.39□□□□□ -0.43
GGA3-219ENST00000584550 CHD7Q9P2D1 2997 aa12.39□□□□□ -0.43
GGA3-219ENST00000584550 MSRAQ9UJ68 235 aa12.39□□□□□ -0.43
GGA3-219ENST00000584550 COG6Q9Y2V7 657 aa12.39□□□□□ -0.43
GGA3-219ENST00000584550 ADAMTS4O75173 837 aa12.38□□□□□ -0.43
GGA3-219ENST00000584550 POLR3DP05423 398 aaPredicted RBP12.38□□□□□ -0.43
GGA3-219ENST00000584550 ZNF865P0CJ78 1059 aaPredicted RBP12.38□□□□□ -0.43
GGA3-219ENST00000584550 BMP1P13497 986 aa12.38□□□□□ -0.43
GGA3-219ENST00000584550 AKR1A1P14550 325 aa12.38□□□□□ -0.43
GGA3-219ENST00000584550 KCNQ1P51787 676 aa12.38□□□□□ -0.43
GGA3-219ENST00000584550 IRX5P78411 483 aaPredicted RBP12.38□□□□□ -0.43
GGA3-219ENST00000584550 PPIGQ13427 754 aaKnown RBP eCLIP12.38□□□□□ -0.43
GGA3-219ENST00000584550 MTX1Q13505 466 aa12.38□□□□□ -0.43
GGA3-219ENST00000584550 TMEM132BQ14DG7 1078 aa12.38□□□□□ -0.43
GGA3-219ENST00000584550 KCNA10Q16322 511 aa12.38□□□□□ -0.43
GGA3-219ENST00000584550 TNNI3KQ59H18 835 aa12.38□□□□□ -0.43
GGA3-219ENST00000584550 ABRAQ8N0Z2 381 aa12.38□□□□□ -0.43
GGA3-219ENST00000584550 NUP133Q8WUM0 1156 aa12.38□□□□□ -0.43
GGA3-219ENST00000584550 EPHX3Q9H6B9 360 aa12.38□□□□□ -0.43
GGA3-219ENST00000584550 TBX21Q9UL17 535 aa12.38□□□□□ -0.43
GGA3-219ENST00000584550 FPGT-TNNI3KV9GXZ4 949 aa12.38□□□□□ -0.43
GGA3-219ENST00000584550 GBF1Q92538 1859 aa12.38□□□□□ -0.43
GGA3-219ENST00000584550 SYNRGQ9UMZ2 1314 aa12.37□□□□□ -0.43
GGA3-219ENST00000584550 A0A0G2JMZ2 1700 aa12.37□□□□□ -0.43
GGA3-219ENST00000584550 MYADML2A6NDP7 307 aa12.37□□□□□ -0.43
GGA3-219ENST00000584550 SKIV2LQ15477 1246 aaKnown RBP12.37□□□□□ -0.43
GGA3-219ENST00000584550 C20orf194Q5TEA3 1177 aa12.37□□□□□ -0.43
GGA3-219ENST00000584550 CCDC174Q6PII3 467 aa12.37□□□□□ -0.43
GGA3-219ENST00000584550 CLEC10AQ8IUN9 316 aa12.37□□□□□ -0.43
GGA3-219ENST00000584550 TMEM199Q8N511 208 aa12.37□□□□□ -0.43
GGA3-219ENST00000584550 MB21D1Q8N884 522 aa12.37□□□□□ -0.43
GGA3-219ENST00000584550 TSEN34Q9BSV6 310 aaKnown RBP12.37□□□□□ -0.43
GGA3-219ENST00000584550 TSPYL2Q9H2G4 693 aaPredicted RBP12.37□□□□□ -0.43
GGA3-219ENST00000584550 SLC28A3Q9HAS3 691 aa12.37□□□□□ -0.43
GGA3-219ENST00000584550 CXXC1Q9P0U4 656 aaPredicted RBP12.37□□□□□ -0.43
GGA3-219ENST00000584550 YBX2Q9Y2T7 364 aaKnown RBP12.37□□□□□ -0.43
GGA3-219ENST00000584550 COL11A1P12107 1806 aaPredicted RBP12.37□□□□□ -0.43
GGA3-219ENST00000584550 NCOR1O75376 2440 aa12.36□□□□□ -0.43
GGA3-219ENST00000584550 CYP2C18P33260 490 aa12.36□□□□□ -0.43
GGA3-219ENST00000584550 RABGGTBP53611 331 aa12.36□□□□□ -0.43
GGA3-219ENST00000584550 OS9Q13438 667 aaPredicted RBP12.36□□□□□ -0.43
GGA3-219ENST00000584550 KCTD2Q14681 263 aa12.36□□□□□ -0.43
GGA3-219ENST00000584550 ZNF792Q3KQV3 632 aa12.36□□□□□ -0.43
GGA3-219ENST00000584550 RASIP1Q5U651 963 aa12.36□□□□□ -0.43
GGA3-219ENST00000584550 LRFN3Q9BTN0 628 aa12.36□□□□□ -0.43
GGA3-219ENST00000584550 NRBP1Q9UHY1 535 aa12.36□□□□□ -0.43
GGA3-219ENST00000584550 CNPY2Q9Y2B0 182 aa12.36□□□□□ -0.43
GGA3-219ENST00000584550 HCN4Q9Y3Q4 1203 aa12.36□□□□□ -0.43
GGA3-219ENST00000584550 SLC25A27O95847 323 aa12.35□□□□□ -0.43
GGA3-219ENST00000584550 MYOGP15173 224 aa12.35□□□□□ -0.43
GGA3-219ENST00000584550 RAB30Q15771 203 aa12.35□□□□□ -0.43
GGA3-219ENST00000584550 OTOP2Q7RTS6 562 aa12.35□□□□□ -0.43
GGA3-219ENST00000584550 KLHDC9Q8NEP7 349 aa12.35□□□□□ -0.43
GGA3-219ENST00000584550 GLT1D1Q96MS3 346 aa12.35□□□□□ -0.43
GGA3-219ENST00000584550 CCDC8Q9H0W5 538 aaPredicted RBP12.35□□□□□ -0.43
GGA3-219ENST00000584550 ANTXR1Q9H6X2 564 aa12.35□□□□□ -0.43
GGA3-219ENST00000584550 FBXO28Q9NVF7 368 aa12.35□□□□□ -0.43
GGA3-219ENST00000584550 TLR7Q9NYK1 1049 aaKnown RBP12.35□□□□□ -0.43
GGA3-219ENST00000584550 ZHX1Q9UKY1 873 aaPredicted RBP12.35□□□□□ -0.43
GGA3-219ENST00000584550 MOXD2PA6NHM9 499 aa12.34□□□□□ -0.43
GGA3-219ENST00000584550 RAD21O60216 631 aa12.34□□□□□ -0.43
GGA3-219ENST00000584550 ASGR1P07306 291 aa12.34□□□□□ -0.43
GGA3-219ENST00000584550 C6orf222P0C671 652 aaPredicted RBP12.34□□□□□ -0.43
GGA3-219ENST00000584550 CYP2D6P10635 497 aa12.34□□□□□ -0.43
GGA3-219ENST00000584550 SLC4A3P48751 1232 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms