RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 ROBO3Q96MS0 1386 aa14.8□□□□□ -0.04
CDK5RAP3-216ENST00000579853 XIRP2A4UGR9 3374 aa14.8□□□□□ -0.04
CDK5RAP3-216ENST00000579853 PIEZO1Q92508 2521 aa14.8□□□□□ -0.04
CDK5RAP3-216ENST00000579853 MAGEB6P1A0A0J9YX57 407 aa14.79□□□□□ -0.04
CDK5RAP3-216ENST00000579853 A0A1W2PQ45 241 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-216ENST00000579853 A0A1W2PQY0 241 aa14.79□□□□□ -0.04
CDK5RAP3-216ENST00000579853 PQBP1O60828 265 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP3-216ENST00000579853 AKR1A1P14550 325 aa14.79□□□□□ -0.04
CDK5RAP3-216ENST00000579853 COPB2P35606 906 aa14.79□□□□□ -0.04
CDK5RAP3-216ENST00000579853 GRIN2CQ14957 1233 aa14.79□□□□□ -0.04
CDK5RAP3-216ENST00000579853 TTF1Q15361 905 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-216ENST00000579853 ANKRD33Q7Z3H0 272 aa14.79□□□□□ -0.04
CDK5RAP3-216ENST00000579853 GAS2L1Q99501 681 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-216ENST00000579853 RIOK1Q9BRS2 568 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP3-216ENST00000579853 TINF2Q9BSI4 451 aa14.79□□□□□ -0.04
CDK5RAP3-216ENST00000579853 CCDC8Q9H0W5 538 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-216ENST00000579853 ZNF576Q9H609 170 aa14.79□□□□□ -0.04
CDK5RAP3-216ENST00000579853 CNPY2Q9Y2B0 182 aa14.79□□□□□ -0.04
CDK5RAP3-216ENST00000579853 WDR46O15213 610 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-216ENST00000579853 COL9A1P20849 921 aa14.78□□□□□ -0.04
CDK5RAP3-216ENST00000579853 ITGB8P26012 769 aa14.78□□□□□ -0.04
CDK5RAP3-216ENST00000579853 KCTD2Q14681 263 aa14.78□□□□□ -0.04
CDK5RAP3-216ENST00000579853 SLC44A5Q8NCS7 719 aa14.78□□□□□ -0.04
CDK5RAP3-216ENST00000579853 ATXN2LQ8WWM7 1075 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-216ENST00000579853 CLUAP1Q96AJ1 413 aa14.78□□□□□ -0.04
CDK5RAP3-216ENST00000579853 EAF2Q96CJ1 260 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-216ENST00000579853 ATG4CQ96DT6 458 aa14.78□□□□□ -0.04
CDK5RAP3-216ENST00000579853 MMP19Q99542 508 aa14.78□□□□□ -0.04
CDK5RAP3-216ENST00000579853 VCPKMTQ9H867 229 aa14.78□□□□□ -0.04
CDK5RAP3-216ENST00000579853 TLR7Q9NYK1 1049 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-216ENST00000579853 TMX2Q9Y320 296 aa14.78□□□□□ -0.04
CDK5RAP3-216ENST00000579853 MROH7Q68CQ1 1323 aa14.77□□□□□ -0.04
CDK5RAP3-216ENST00000579853 MOXD2PA6NHM9 499 aa14.77□□□□□ -0.05
CDK5RAP3-216ENST00000579853 PGK1P00558 417 aa14.77□□□□□ -0.05
CDK5RAP3-216ENST00000579853 EPHB4P54760 987 aa14.77□□□□□ -0.05
CDK5RAP3-216ENST00000579853 ERC1Q8IUD2 1116 aa14.77□□□□□ -0.05
CDK5RAP3-216ENST00000579853 RIOX2Q8IUF8 465 aa14.77□□□□□ -0.05
CDK5RAP3-216ENST00000579853 MSL3Q8N5Y2 521 aaKnown RBP14.77□□□□□ -0.05
CDK5RAP3-216ENST00000579853 TIFAQ96CG3 184 aa14.77□□□□□ -0.05
CDK5RAP3-216ENST00000579853 CCDC17Q96LX7 622 aa14.77□□□□□ -0.05
CDK5RAP3-216ENST00000579853 STARD7Q9NQZ5 370 aa14.77□□□□□ -0.05
CDK5RAP3-216ENST00000579853 NAV1Q8NEY1 1877 aa14.77□□□□□ -0.05
CDK5RAP3-216ENST00000579853 BCAR3O75815 825 aa14.76□□□□□ -0.05
CDK5RAP3-216ENST00000579853 TIMP1P01033 207 aa14.76□□□□□ -0.05
CDK5RAP3-216ENST00000579853 ICA1Q05084 483 aa14.76□□□□□ -0.05
CDK5RAP3-216ENST00000579853 FAAP100Q0VG06 881 aa14.76□□□□□ -0.05
CDK5RAP3-216ENST00000579853 PPIGQ13427 754 aaKnown RBP eCLIP14.76□□□□□ -0.052e-14■■■■■ 29.5
CDK5RAP3-216ENST00000579853 ZNF792Q3KQV3 632 aa14.76□□□□□ -0.05
CDK5RAP3-216ENST00000579853 AKNAD1Q5T1N1 836 aa14.76□□□□□ -0.05
CDK5RAP3-216ENST00000579853 SLC9C2Q5TAH2 1124 aa14.76□□□□□ -0.05
CDK5RAP3-216ENST00000579853 ZKSCAN2Q63HK3 967 aa14.76□□□□□ -0.05
CDK5RAP3-216ENST00000579853 ANTXR1Q9H6X2 564 aa14.76□□□□□ -0.05
CDK5RAP3-216ENST00000579853 ADAMTS5Q9UNA0 930 aa14.76□□□□□ -0.05
CDK5RAP3-216ENST00000579853 MYH8P13535 1937 aa14.75□□□□□ -0.05
CDK5RAP3-216ENST00000579853 ADAMTS4O75173 837 aa14.75□□□□□ -0.05
CDK5RAP3-216ENST00000579853 ZNF865P0CJ78 1059 aaPredicted RBP14.75□□□□□ -0.05
CDK5RAP3-216ENST00000579853 STAT3P40763 770 aa14.75□□□□□ -0.05
CDK5RAP3-216ENST00000579853 ACLYP53396 1101 aa14.75□□□□□ -0.05
CDK5RAP3-216ENST00000579853 TMEM132BQ14DG7 1078 aa14.75□□□□□ -0.05
CDK5RAP3-216ENST00000579853 MFSD5Q6N075 450 aa14.75□□□□□ -0.05
CDK5RAP3-216ENST00000579853 AMOTL1Q8IY63 956 aa14.75□□□□□ -0.05
CDK5RAP3-216ENST00000579853 SPICE1Q8N0Z3 855 aa14.75□□□□□ -0.05
CDK5RAP3-216ENST00000579853 TMEM57Q8N5G2 664 aa14.75□□□□□ -0.05
CDK5RAP3-216ENST00000579853 DCP1AQ9NPI6 582 aaPredicted RBP14.75□□□□□ -0.05
CDK5RAP3-216ENST00000579853 FAM184BQ9ULE4 1060 aa14.75□□□□□ -0.05
CDK5RAP3-216ENST00000579853 REV3LO60673 3130 aa14.75□□□□□ -0.05
CDK5RAP3-216ENST00000579853 PLXNA1Q9UIW2 1896 aa14.75□□□□□ -0.05
CDK5RAP3-216ENST00000579853 ELP1O95163 1332 aa14.74□□□□□ -0.05
CDK5RAP3-216ENST00000579853 PGK2P07205 417 aa14.74□□□□□ -0.05
CDK5RAP3-216ENST00000579853 KIAA1755Q5JYT7 1200 aa14.74□□□□□ -0.05
CDK5RAP3-216ENST00000579853 USP38Q8NB14 1042 aa14.74□□□□□ -0.05
CDK5RAP3-216ENST00000579853 PCSK9Q8NBP7 692 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP3-216ENST00000579853 GLT1D1Q96MS3 346 aa14.74□□□□□ -0.05
CDK5RAP3-216ENST00000579853 GOPCQ9HD26 462 aa14.74□□□□□ -0.05
CDK5RAP3-216ENST00000579853 ATP8A2Q9NTI2 1148 aa14.74□□□□□ -0.05
CDK5RAP3-216ENST00000579853 THEGQ9P2T0 379 aa14.74□□□□□ -0.05
CDK5RAP3-216ENST00000579853 PARP14Q460N5 1801 aa14.73□□□□□ -0.05
CDK5RAP3-216ENST00000579853 SYNGAP1Q96PV0 1343 aa14.73□□□□□ -0.05
CDK5RAP3-216ENST00000579853 PDE6AP16499 860 aa14.73□□□□□ -0.05
CDK5RAP3-216ENST00000579853 PSRC1Q6PGN9 363 aaPredicted RBP14.73□□□□□ -0.05
CDK5RAP3-216ENST00000579853 CCDC129Q6ZRS4 1044 aa14.73□□□□□ -0.05
CDK5RAP3-216ENST00000579853 AACSQ86V21 672 aa14.73□□□□□ -0.05
CDK5RAP3-216ENST00000579853 TMEM199Q8N511 208 aa14.73□□□□□ -0.05
CDK5RAP3-216ENST00000579853 IL27Q8NEV9 243 aa14.73□□□□□ -0.05
CDK5RAP3-216ENST00000579853 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.73□□□□□ -0.059e-16■□□□□ 8.9
CDK5RAP3-216ENST00000579853 SPC25Q9HBM1 224 aa14.73□□□□□ -0.05
CDK5RAP3-216ENST00000579853 TBX21Q9UL17 535 aa14.73□□□□□ -0.05
CDK5RAP3-216ENST00000579853 TNNQ9UQP3 1299 aa14.73□□□□□ -0.05
CDK5RAP3-216ENST00000579853 SYNRGQ9UMZ2 1314 aa14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 COL11A1P12107 1806 aaPredicted RBP14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 VWA5AO00534 786 aa14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 DUSP11O75319 330 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 TAL1P17542 331 aaPredicted RBP14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 MRPS5P82675 430 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 RAB30Q15771 203 aa14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 KCNA10Q16322 511 aa14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 HSP90AB4PQ58FF6 505 aa14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 SIAH1Q8IUQ4 282 aa14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 FTSJ3Q8IY81 847 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 KLHDC9Q8NEP7 349 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms