RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 ATG4CQ96DT6 458 aa4.64□□□□□ -1.67
NUP85-209ENST00000578987 KIF1BPQ96EK5 621 aa4.64□□□□□ -1.67
NUP85-209ENST00000578987 LBHD1Q9BQE6 289 aaPredicted RBP4.64□□□□□ -1.67
NUP85-209ENST00000578987 SPATC1LQ9H0A9 340 aa4.64□□□□□ -1.67
NUP85-209ENST00000578987 DCP1AQ9NPI6 582 aaPredicted RBP4.64□□□□□ -1.67
NUP85-209ENST00000578987 FBXO28Q9NVF7 368 aa4.64□□□□□ -1.67
NUP85-209ENST00000578987 PAG1Q9NWQ8 432 aa4.64□□□□□ -1.67
NUP85-209ENST00000578987 MTMR10Q9NXD2 777 aa4.64□□□□□ -1.67
NUP85-209ENST00000578987 SLC4A4Q9Y6R1 1079 aa4.64□□□□□ -1.67
NUP85-209ENST00000578987 DNAH12Q6ZR08 3092 aa4.64□□□□□ -1.67
NUP85-209ENST00000578987 TRIP12Q14669 1992 aaPredicted RBP4.64□□□□□ -1.67
NUP85-209ENST00000578987 COL6A3P12111 3177 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 MINDY4BA8MYZ0 360 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 STRNO43815 780 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 PGK1P00558 417 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 HOXC6P09630 235 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 CYBAP13498 195 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 ATP5JP18859 108 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 ITGB8P26012 769 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 IRX5P78411 483 aaPredicted RBP4.63□□□□□ -1.67
NUP85-209ENST00000578987 SHHQ15465 462 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 LRIT3Q3SXY7 679 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 TRIM60Q495X7 471 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 HSP90AB4PQ58FF6 505 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 C9orf50Q5SZB4 431 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 FAM83BQ5T0W9 1011 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 C20orf194Q5TEA3 1177 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 TSHZ3Q63HK5 1081 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 CTR9Q6PD62 1173 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 TMEM179Q6ZVK1 233 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 RPAP2Q8IXW5 612 aaPredicted RBP4.63□□□□□ -1.67
NUP85-209ENST00000578987 ARRDC4Q8NCT1 418 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 GTF3C2Q8WUA4 911 aaPredicted RBP4.63□□□□□ -1.67
NUP85-209ENST00000578987 BADQ92934 168 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 LENG1Q96BZ8 264 aaPredicted RBP4.63□□□□□ -1.67
NUP85-209ENST00000578987 MAML3Q96JK9 1138 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 MMP19Q99542 508 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 NUP88Q99567 741 aaPredicted RBP4.63□□□□□ -1.67
NUP85-209ENST00000578987 HAUS7Q99871 368 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 PUS7LQ9H0K6 701 aaKnown RBP4.63□□□□□ -1.67
NUP85-209ENST00000578987 ARHGEF10LQ9HCE6 1279 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 PRDM5Q9NQX1 630 aaPredicted RBP4.63□□□□□ -1.67
NUP85-209ENST00000578987 PLSCR2Q9NRY7 297 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 ATP8A2Q9NTI2 1148 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 ZBTB40Q9NUA8 1239 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 SWAP70Q9UH65 585 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 TMX2Q9Y320 296 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 MYH6P13533 1939 aa4.63□□□□□ -1.67
NUP85-209ENST00000578987 GREB1LQ9C091 1923 aaPredicted RBP4.63□□□□□ -1.67
NUP85-209ENST00000578987 RANBP2P49792 3224 aaKnown RBP4.63□□□□□ -1.67
NUP85-209ENST00000578987 TCF20Q9UGU0 1960 aaKnown RBP4.63□□□□□ -1.67
NUP85-209ENST00000578987 ZNF236Q9UL36 1845 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 SCN5AQ14524 2016 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 TRIM43BA6NCK2 446 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 GSG1L2A8MUP6 293 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 KBTBD13C9JR72 458 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 POTEB2H3BUK9 544 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 DNM1LO00429 736 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 IGSF3O75054 1194 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 RAB11FIP3O75154 756 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 HMMRO75330 724 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 IGHA2P01877 340 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 FCER1AP12319 257 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 ICA1Q05084 483 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 LRRC41Q15345 812 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 FAM47AQ5JRC9 791 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 OLFML2BQ68BL8 750 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 C16orf86Q6ZW13 317 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 CERS3Q8IU89 383 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 CPXCR1Q8N123 301 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.62□□□□□ -1.67
NUP85-209ENST00000578987 TRIM43Q96BQ3 446 aaPredicted RBP4.62□□□□□ -1.67
NUP85-209ENST00000578987 GUCD1Q96NT3 240 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 VCPKMTQ9H867 229 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 MKNK2Q9HBH9 465 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 INCENPQ9NQS7 918 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 CLIP2Q9UDT6 1046 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 PRKAG2Q9UGJ0 569 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 DDX19BQ9UMR2 479 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 STXBP5LQ9Y2K9 1186 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 RIPK3Q9Y572 518 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 LCTP09848 1927 aa4.62□□□□□ -1.67
NUP85-209ENST00000578987 VWA5AO00534 786 aa4.61□□□□□ -1.67
NUP85-209ENST00000578987 WDR46O15213 610 aaKnown RBP4.61□□□□□ -1.67
NUP85-209ENST00000578987 SEPT4O43236 478 aa4.61□□□□□ -1.67
NUP85-209ENST00000578987 MSCO60682 206 aa4.61□□□□□ -1.67
NUP85-209ENST00000578987 PRDM1O75626 825 aa4.61□□□□□ -1.67
NUP85-209ENST00000578987 MS4A1P11836 297 aa4.61□□□□□ -1.67
NUP85-209ENST00000578987 RASA1P20936 1047 aa4.61□□□□□ -1.67
NUP85-209ENST00000578987 PTGS1P23219 599 aa4.61□□□□□ -1.67
NUP85-209ENST00000578987 STAT3P40763 770 aa4.61□□□□□ -1.67
NUP85-209ENST00000578987 EPHB4P54760 987 aa4.61□□□□□ -1.67
NUP85-209ENST00000578987 SNAP25P60880 206 aa4.61□□□□□ -1.67
NUP85-209ENST00000578987 TLE2Q04725 743 aa4.61□□□□□ -1.67
NUP85-209ENST00000578987 ZNF792Q3KQV3 632 aa4.61□□□□□ -1.67
NUP85-209ENST00000578987 GPR153Q6NV75 609 aa4.61□□□□□ -1.67
NUP85-209ENST00000578987 RIOX2Q8IUF8 465 aa4.61□□□□□ -1.67
NUP85-209ENST00000578987 AMOTL1Q8IY63 956 aa4.61□□□□□ -1.67
NUP85-209ENST00000578987 MB21D1Q8N884 522 aa4.61□□□□□ -1.67
NUP85-209ENST00000578987 SHCBP1Q8NEM2 672 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms