RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 ZSCAN10Q96SZ4 725 aaPredicted RBP16.34■□□□□ 0.21
SNORD3B-1-201ENST00000577988 TMEM47Q9BQJ4 181 aa16.34■□□□□ 0.21
SNORD3B-1-201ENST00000577988 ADAMTS5Q9UNA0 930 aa16.34■□□□□ 0.21
SNORD3B-1-201ENST00000577988 RLFQ13129 1914 aa16.34■□□□□ 0.21
SNORD3B-1-201ENST00000577988 MGAMO43451 1857 aa16.33■□□□□ 0.21
SNORD3B-1-201ENST00000577988 DOCK3Q8IZD9 2030 aa16.33■□□□□ 0.21
SNORD3B-1-201ENST00000577988 SLC1A4P43007 532 aa16.33■□□□□ 0.2
SNORD3B-1-201ENST00000577988 PSMC4P43686 418 aa16.33■□□□□ 0.2
SNORD3B-1-201ENST00000577988 ERVK-9P63128 1117 aa16.33■□□□□ 0.2
SNORD3B-1-201ENST00000577988 ERVK-24P63145 666 aa16.33■□□□□ 0.2
SNORD3B-1-201ENST00000577988 KRT32Q14532 448 aa16.33■□□□□ 0.2
SNORD3B-1-201ENST00000577988 SART3Q15020 963 aaKnown RBP16.33■□□□□ 0.2
SNORD3B-1-201ENST00000577988 OTOP1Q7RTM1 612 aa16.33■□□□□ 0.2
SNORD3B-1-201ENST00000577988 FAM160B2Q86V87 743 aa16.33■□□□□ 0.2
SNORD3B-1-201ENST00000577988 PRPF38AQ8NAV1 312 aaKnown RBP16.33■□□□□ 0.2
SNORD3B-1-201ENST00000577988 DCAF4Q8WV16 495 aa16.33■□□□□ 0.2
SNORD3B-1-201ENST00000577988 PPP1R9AQ9ULJ8 1098 aa16.33■□□□□ 0.2
SNORD3B-1-201ENST00000577988 TRIM17Q9Y577 477 aa16.33■□□□□ 0.2
SNORD3B-1-201ENST00000577988 ERICH2A1L162 156 aa16.32■□□□□ 0.2
SNORD3B-1-201ENST00000577988 FMNL1O95466 1100 aaPredicted RBP16.32■□□□□ 0.2
SNORD3B-1-201ENST00000577988 MAPK4P31152 587 aa16.32■□□□□ 0.2
SNORD3B-1-201ENST00000577988 PARP14Q460N5 1801 aa16.32■□□□□ 0.2
SNORD3B-1-201ENST00000577988 FBXO46Q6PJ61 603 aaPredicted RBP16.32■□□□□ 0.2
SNORD3B-1-201ENST00000577988 SLF1Q9BQI6 1058 aa16.32■□□□□ 0.2
SNORD3B-1-201ENST00000577988 TNKSO95271 1327 aa16.31■□□□□ 0.2
SNORD3B-1-201ENST00000577988 MCCP23508 829 aa16.31■□□□□ 0.2
SNORD3B-1-201ENST00000577988 STOX1Q6ZVD7 989 aa16.31■□□□□ 0.2
SNORD3B-1-201ENST00000577988 TMTC2Q8N394 836 aa16.31■□□□□ 0.2
SNORD3B-1-201ENST00000577988 ENAHQ8N8S7 591 aaPredicted RBP16.31■□□□□ 0.2
SNORD3B-1-201ENST00000577988 KCNB2Q92953 911 aa16.31■□□□□ 0.2
SNORD3B-1-201ENST00000577988 COA7Q96BR5 231 aa16.31■□□□□ 0.2
SNORD3B-1-201ENST00000577988 ZKSCAN3Q9BRR0 538 aa16.31■□□□□ 0.2
SNORD3B-1-201ENST00000577988 KAT14Q9H8E8 782 aa16.31■□□□□ 0.2
SNORD3B-1-201ENST00000577988 TXNRD2Q9NNW7 524 aa16.31■□□□□ 0.2
SNORD3B-1-201ENST00000577988 IFIT3O14879 490 aaKnown RBP16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 MCM5P33992 734 aa16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 HSPA4P34932 840 aa16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 COPB2P35606 906 aa16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 STAT2P52630 851 aa16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 SEC23AQ15436 765 aa16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 Q3C1V9 767 aa16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 IFIT1BQ5T764 474 aaKnown RBP16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 POTEEQ6S8J3 1075 aa16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 CYB5R4Q7L1T6 521 aa16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 CCAR1Q8IX12 1150 aaKnown RBP16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 MB21D2Q8IYB1 491 aaPredicted RBP16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 TNS4Q8IZW8 715 aa16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 SHCBP1Q8NEM2 672 aa16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 NKX2-3Q8TAU0 364 aa16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 TMEM87BQ96K49 555 aa16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 TRIM47Q96LD4 638 aa16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 PAGR1Q9BTK6 254 aa16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 MCOLN1Q9GZU1 580 aa16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 SRRDQ9UH36 339 aa16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 PTPN22Q9Y2R2 807 aa16.3■□□□□ 0.2
SNORD3B-1-201ENST00000577988 TMEM232C9JQI7 657 aa16.29■□□□□ 0.2
SNORD3B-1-201ENST00000577988 VWA5AO00534 786 aa16.29■□□□□ 0.2
SNORD3B-1-201ENST00000577988 TNPO2O14787 897 aaKnown RBP16.29■□□□□ 0.2
SNORD3B-1-201ENST00000577988 ZBED4O75132 1171 aa16.29■□□□□ 0.2
SNORD3B-1-201ENST00000577988 CNMDO75829 334 aa16.29■□□□□ 0.2
SNORD3B-1-201ENST00000577988 HMGB1P09429 215 aaKnown RBP16.29■□□□□ 0.2
SNORD3B-1-201ENST00000577988 SNHG28P0DPA3 235 aa16.29■□□□□ 0.2
SNORD3B-1-201ENST00000577988 GPATCH4Q5T3I0 446 aaKnown RBP16.29■□□□□ 0.2
SNORD3B-1-201ENST00000577988 BTNL9Q6UXG8 535 aa16.29■□□□□ 0.2
SNORD3B-1-201ENST00000577988 PNMA1Q8ND90 353 aa16.29■□□□□ 0.2
SNORD3B-1-201ENST00000577988 ATG4CQ96DT6 458 aa16.29■□□□□ 0.2
SNORD3B-1-201ENST00000577988 NUP88Q99567 741 aaPredicted RBP16.29■□□□□ 0.2
SNORD3B-1-201ENST00000577988 ARHGAP39Q9C0H5 1083 aa16.29■□□□□ 0.2
SNORD3B-1-201ENST00000577988 FBXO28Q9NVF7 368 aa16.29■□□□□ 0.2
SNORD3B-1-201ENST00000577988 BTBD7Q9P203 1132 aa16.29■□□□□ 0.2
SNORD3B-1-201ENST00000577988 TAF6LQ9Y6J9 622 aa16.29■□□□□ 0.2
SNORD3B-1-201ENST00000577988 WDR19Q8NEZ3 1342 aa16.28■□□□□ 0.2
SNORD3B-1-201ENST00000577988 ATP2A1O14983 1001 aa16.28■□□□□ 0.2
SNORD3B-1-201ENST00000577988 SLC25A27O95847 323 aa16.28■□□□□ 0.2
SNORD3B-1-201ENST00000577988 PDHBP11177 359 aa16.28■□□□□ 0.2
SNORD3B-1-201ENST00000577988 CTGFP29279 349 aa16.28■□□□□ 0.2
SNORD3B-1-201ENST00000577988 OAZ1P54368 228 aa16.28■□□□□ 0.2
SNORD3B-1-201ENST00000577988 WTAPQ15007 396 aa16.28■□□□□ 0.2
SNORD3B-1-201ENST00000577988 NEK1Q96PY6 1258 aa16.28■□□□□ 0.2
SNORD3B-1-201ENST00000577988 USP26Q9BXU7 913 aa16.28■□□□□ 0.2
SNORD3B-1-201ENST00000577988 SPATC1LQ9H0A9 340 aa16.28■□□□□ 0.2
SNORD3B-1-201ENST00000577988 CTDP1Q9Y5B0 961 aaPredicted RBP16.28■□□□□ 0.2
SNORD3B-1-201ENST00000577988 STRNO43815 780 aa16.27■□□□□ 0.2
SNORD3B-1-201ENST00000577988 CAP1Q01518 475 aa16.27■□□□□ 0.2
SNORD3B-1-201ENST00000577988 ZNF543Q08ER8 600 aa16.27■□□□□ 0.2
SNORD3B-1-201ENST00000577988 CCDC96Q2M329 555 aa16.27■□□□□ 0.2
SNORD3B-1-201ENST00000577988 RIOX2Q8IUF8 465 aa16.27■□□□□ 0.2
SNORD3B-1-201ENST00000577988 IGDCC4Q8TDY8 1250 aa16.27■□□□□ 0.2
SNORD3B-1-201ENST00000577988 MROH8Q9H579 483 aa16.27■□□□□ 0.2
SNORD3B-1-201ENST00000577988 SLC38A10Q9HBR0 1119 aa16.27■□□□□ 0.2
SNORD3B-1-201ENST00000577988 PNMA2Q9UL42 364 aa16.27■□□□□ 0.2
SNORD3B-1-201ENST00000577988 ISY1Q9ULR0 285 aaKnown RBP16.27■□□□□ 0.2
SNORD3B-1-201ENST00000577988 A0A0G2JMZ2 1700 aa16.27■□□□□ 0.19
SNORD3B-1-201ENST00000577988 PRC1O43663 620 aa16.26■□□□□ 0.19
SNORD3B-1-201ENST00000577988 STAT3P40763 770 aa16.26■□□□□ 0.19
SNORD3B-1-201ENST00000577988 LIFRP42702 1097 aa16.26■□□□□ 0.19
SNORD3B-1-201ENST00000577988 ANTXR2P58335 489 aa16.26■□□□□ 0.19
SNORD3B-1-201ENST00000577988 IKQ13123 557 aaPredicted RBP16.26■□□□□ 0.19
SNORD3B-1-201ENST00000577988 IRF5Q13568 498 aa16.26■□□□□ 0.19
SNORD3B-1-201ENST00000577988 TMEM132BQ14DG7 1078 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms