RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 MAP2K2P36507 400 aa11.38□□□□□ -0.59
NPLOC4-219ENST00000576713 KIF23Q02241 960 aaPredicted RBP11.38□□□□□ -0.59
NPLOC4-219ENST00000576713 MAP2K1Q02750 393 aaPredicted RBP11.38□□□□□ -0.59
NPLOC4-219ENST00000576713 NMIQ13287 307 aaPredicted RBP11.38□□□□□ -0.59
NPLOC4-219ENST00000576713 ZSCAN25Q6NSZ9 544 aa11.38□□□□□ -0.59
NPLOC4-219ENST00000576713 TMED8Q6PL24 325 aaPredicted RBP11.38□□□□□ -0.59
NPLOC4-219ENST00000576713 ZNF589Q86UQ0 364 aaPredicted RBP11.38□□□□□ -0.59
NPLOC4-219ENST00000576713 METTL16Q86W50 562 aaKnown RBP11.38□□□□□ -0.59
NPLOC4-219ENST00000576713 ANKRD13AQ8IZ07 590 aa11.38□□□□□ -0.59
NPLOC4-219ENST00000576713 PNMA1Q8ND90 353 aa11.38□□□□□ -0.59
NPLOC4-219ENST00000576713 RILPL2Q969X0 211 aa11.38□□□□□ -0.59
NPLOC4-219ENST00000576713 WNK4Q96J92 1243 aa11.38□□□□□ -0.59
NPLOC4-219ENST00000576713 ZNF341Q9BYN7 854 aa11.38□□□□□ -0.59
NPLOC4-219ENST00000576713 CRNKL1Q9BZJ0 848 aaKnown RBP11.38□□□□□ -0.59
NPLOC4-219ENST00000576713 UNC93B1Q9H1C4 597 aa11.38□□□□□ -0.59
NPLOC4-219ENST00000576713 SLC4A4Q9Y6R1 1079 aa11.38□□□□□ -0.59
NPLOC4-219ENST00000576713 HTTP42858 3142 aa11.38□□□□□ -0.59
NPLOC4-219ENST00000576713 LAMB1P07942 1786 aa11.37□□□□□ -0.59
NPLOC4-219ENST00000576713 ZFYP08048 801 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-219ENST00000576713 IREB2P48200 963 aaKnown RBP11.37□□□□□ -0.59
NPLOC4-219ENST00000576713 SPRYD7Q5W111 196 aa11.37□□□□□ -0.59
NPLOC4-219ENST00000576713 SLC44A5Q8NCS7 719 aa11.37□□□□□ -0.59
NPLOC4-219ENST00000576713 AIDAQ96BJ3 306 aa11.37□□□□□ -0.59
NPLOC4-219ENST00000576713 OPTNQ96CV9 577 aa11.37□□□□□ -0.59
NPLOC4-219ENST00000576713 PLA2G2EQ9NZK7 142 aa11.37□□□□□ -0.59
NPLOC4-219ENST00000576713 MYH1P12882 1939 aa11.37□□□□□ -0.59
NPLOC4-219ENST00000576713 GABPAQ06546 454 aa11.36□□□□□ -0.59
NPLOC4-219ENST00000576713 PLA2G2CQ5R387 149 aa11.36□□□□□ -0.59
NPLOC4-219ENST00000576713 DCAF15Q66K64 600 aa11.36□□□□□ -0.59
NPLOC4-219ENST00000576713 CTR9Q6PD62 1173 aa11.36□□□□□ -0.59
NPLOC4-219ENST00000576713 ARMC2Q8NEN0 867 aa11.36□□□□□ -0.59
NPLOC4-219ENST00000576713 SLC10A4Q96EP9 437 aa11.36□□□□□ -0.59
NPLOC4-219ENST00000576713 DYNLL2Q96FJ2 89 aa11.36□□□□□ -0.59
NPLOC4-219ENST00000576713 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.36□□□□□ -0.59
NPLOC4-219ENST00000576713 MCM9Q9NXL9 1143 aa11.36□□□□□ -0.59
NPLOC4-219ENST00000576713 PI4KBQ9UBF8 816 aa11.36□□□□□ -0.59
NPLOC4-219ENST00000576713 TACC3Q9Y6A5 838 aa11.36□□□□□ -0.59
NPLOC4-219ENST00000576713 BAZ2AQ9UIF9 1905 aaKnown RBP11.36□□□□□ -0.59
NPLOC4-219ENST00000576713 DOCK1Q14185 1865 aa11.36□□□□□ -0.59
NPLOC4-219ENST00000576713 PHIPQ8WWQ0 1821 aa11.35□□□□□ -0.59
NPLOC4-219ENST00000576713 USP17L12C9JPN9 530 aa11.35□□□□□ -0.59
NPLOC4-219ENST00000576713 USP17L21D6R901 530 aa11.35□□□□□ -0.59
NPLOC4-219ENST00000576713 HSPA8P11142 646 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-219ENST00000576713 SHMT1P34896 483 aa11.35□□□□□ -0.59
NPLOC4-219ENST00000576713 CTCFP49711 727 aaPredicted RBP11.35□□□□□ -0.59
NPLOC4-219ENST00000576713 NOGQ13253 232 aa11.35□□□□□ -0.59
NPLOC4-219ENST00000576713 DGKZQ13574 1117 aa11.35□□□□□ -0.59
NPLOC4-219ENST00000576713 NOL9Q5SY16 702 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-219ENST00000576713 CERS3Q8IU89 383 aa11.35□□□□□ -0.59
NPLOC4-219ENST00000576713 PTPN18Q99952 460 aa11.35□□□□□ -0.59
NPLOC4-219ENST00000576713 DHX36Q9H2U1 1008 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-219ENST00000576713 PRDM10Q9NQV6 1147 aa11.35□□□□□ -0.59
NPLOC4-219ENST00000576713 ATP8A2Q9NTI2 1148 aa11.35□□□□□ -0.59
NPLOC4-219ENST00000576713 AK9Q5TCS8 1911 aa11.35□□□□□ -0.59
NPLOC4-219ENST00000576713 CENPFP49454 3210 aa11.34□□□□□ -0.59
NPLOC4-219ENST00000576713 IGF2BP3O00425 579 aaKnown RBP eCLIP11.34□□□□□ -0.59
NPLOC4-219ENST00000576713 GDF11O95390 407 aa11.34□□□□□ -0.59
NPLOC4-219ENST00000576713 MOGSQ13724 837 aa11.34□□□□□ -0.59
NPLOC4-219ENST00000576713 C12orf60Q5U649 245 aa11.34□□□□□ -0.59
NPLOC4-219ENST00000576713 TATDN1Q6P1N9 297 aa11.34□□□□□ -0.59
NPLOC4-219ENST00000576713 SCYL3Q8IZE3 742 aa11.34□□□□□ -0.59
NPLOC4-219ENST00000576713 HOOK2Q96ED9 719 aa11.34□□□□□ -0.59
NPLOC4-219ENST00000576713 EHD4Q9H223 541 aa11.34□□□□□ -0.59
NPLOC4-219ENST00000576713 PPP4R2Q9NY27 417 aa11.34□□□□□ -0.59
NPLOC4-219ENST00000576713 HERC5Q9UII4 1024 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-219ENST00000576713 CSADQ9Y600 493 aa11.34□□□□□ -0.59
NPLOC4-219ENST00000576713 ATAD5Q96QE3 1844 aa11.34□□□□□ -0.59
NPLOC4-219ENST00000576713 UNCXA6NJT0 531 aa11.33□□□□□ -0.6
NPLOC4-219ENST00000576713 POLR3DP05423 398 aaPredicted RBP11.33□□□□□ -0.6
NPLOC4-219ENST00000576713 PTPRAP18433 802 aa11.33□□□□□ -0.6
NPLOC4-219ENST00000576713 GUCY1A2P33402 732 aa11.33□□□□□ -0.6
NPLOC4-219ENST00000576713 CAP2P40123 477 aa11.33□□□□□ -0.6
NPLOC4-219ENST00000576713 LBX1P52954 281 aa11.33□□□□□ -0.6
NPLOC4-219ENST00000576713 CWC27Q6UX04 472 aaKnown RBP11.33□□□□□ -0.6
NPLOC4-219ENST00000576713 CLEC10AQ8IUN9 316 aa11.33□□□□□ -0.6
NPLOC4-219ENST00000576713 FOXP4Q8IVH2 680 aaPredicted RBP11.33□□□□□ -0.6
NPLOC4-219ENST00000576713 IFNL3Q8IZI9 196 aa11.33□□□□□ -0.6
NPLOC4-219ENST00000576713 STK11IPQ8N1F8 1099 aa11.33□□□□□ -0.6
NPLOC4-219ENST00000576713 BRI3BPQ8WY22 251 aa11.33□□□□□ -0.6
NPLOC4-219ENST00000576713 GPKOWQ92917 476 aaPredicted RBP eCLIP11.33□□□□□ -0.6
NPLOC4-219ENST00000576713 R3HDMLQ9H3Y0 253 aa11.33□□□□□ -0.6
NPLOC4-219ENST00000576713 INCENPQ9NQS7 918 aa11.33□□□□□ -0.6
NPLOC4-219ENST00000576713 HELLSQ9NRZ9 838 aa11.33□□□□□ -0.6
NPLOC4-219ENST00000576713 SERPINB13Q9UIV8 391 aa11.33□□□□□ -0.6
NPLOC4-219ENST00000576713 PATL2C9JE40 543 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-219ENST00000576713 CTNND1O60716 968 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-219ENST00000576713 HLA-DOAP06340 250 aa11.32□□□□□ -0.6
NPLOC4-219ENST00000576713 ZBTB48P10074 688 aaPredicted RBP11.32□□□□□ -0.6
NPLOC4-219ENST00000576713 CHMLP26374 656 aa11.32□□□□□ -0.6
NPLOC4-219ENST00000576713 PPIL2Q13356 520 aa11.32□□□□□ -0.6
NPLOC4-219ENST00000576713 MCMDC2Q4G0Z9 681 aa11.32□□□□□ -0.6
NPLOC4-219ENST00000576713 ERO1BQ86YB8 467 aa11.32□□□□□ -0.6
NPLOC4-219ENST00000576713 CRACR2BQ8N4Y2 399 aaPredicted RBP11.32□□□□□ -0.6
NPLOC4-219ENST00000576713 AFG3L2Q9Y4W6 797 aa11.32□□□□□ -0.6
NPLOC4-219ENST00000576713 CCDC171Q6TFL3 1326 aa11.32□□□□□ -0.6
NPLOC4-219ENST00000576713 ROBO3Q96MS0 1386 aa11.31□□□□□ -0.6
NPLOC4-219ENST00000576713 GH2P01242 217 aa11.31□□□□□ -0.6
NPLOC4-219ENST00000576713 HSPD1P10809 573 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-219ENST00000576713 TM4SF4P48230 202 aa11.31□□□□□ -0.6
NPLOC4-219ENST00000576713 CDK8P49336 464 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms