RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 EARS2Q5JPH6 523 aaKnown RBP8.12□□□□□ -1.11
SMG1-215ENST00000568239 PIK3AP1Q6ZUJ8 805 aa8.12□□□□□ -1.11
SMG1-215ENST00000568239 AGBL3Q8NEM8 1001 aa8.12□□□□□ -1.11
SMG1-215ENST00000568239 CCDC17Q96LX7 622 aa8.12□□□□□ -1.11
SMG1-215ENST00000568239 CLIC6Q96NY7 704 aa8.12□□□□□ -1.11
SMG1-215ENST00000568239 GMLQ99445 158 aa8.12□□□□□ -1.11
SMG1-215ENST00000568239 SGIP1Q9BQI5 828 aa8.12□□□□□ -1.11
SMG1-215ENST00000568239 PCDHB6Q9Y5E3 794 aa8.12□□□□□ -1.11
SMG1-215ENST00000568239 ENTPD3O75355 529 aa8.11□□□□□ -1.11
SMG1-215ENST00000568239 NDUFA8P51970 172 aa8.11□□□□□ -1.11
SMG1-215ENST00000568239 SEPT2Q15019 361 aa8.11□□□□□ -1.11
SMG1-215ENST00000568239 ABCB5Q2M3G0 1257 aa8.11□□□□□ -1.11
SMG1-215ENST00000568239 NBPF9Q3BBW0 867 aa8.11□□□□□ -1.11
SMG1-215ENST00000568239 NOM1Q5C9Z4 860 aaKnown RBP8.11□□□□□ -1.11
SMG1-215ENST00000568239 RRP36Q96EU6 259 aaKnown RBP8.11□□□□□ -1.11
SMG1-215ENST00000568239 LZTS2Q9BRK4 669 aa8.11□□□□□ -1.11
SMG1-215ENST00000568239 SDF4Q9BRK5 362 aa8.11□□□□□ -1.11
SMG1-215ENST00000568239 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.11□□□□□ -1.11
SMG1-215ENST00000568239 EEF2P13639 858 aaKnown RBP8.11□□□□□ -1.11
SMG1-215ENST00000568239 FAM160A1Q05DH4 1040 aa8.11□□□□□ -1.11
SMG1-215ENST00000568239 TNIP1Q15025 636 aa8.11□□□□□ -1.11
SMG1-215ENST00000568239 TMEM132AQ24JP5 1023 aa8.11□□□□□ -1.11
SMG1-215ENST00000568239 SLC35G1Q2M3R5 365 aa8.11□□□□□ -1.11
SMG1-215ENST00000568239 SPECC1Q5M775 1068 aa8.11□□□□□ -1.11
SMG1-215ENST00000568239 WWC2Q6AWC2 1192 aa8.11□□□□□ -1.11
SMG1-215ENST00000568239 KCTD1Q719H9 257 aa8.11□□□□□ -1.11
SMG1-215ENST00000568239 MIGA2Q7L4E1 593 aa8.11□□□□□ -1.11
SMG1-215ENST00000568239 RASGRP4Q8TDF6 673 aa8.11□□□□□ -1.11
SMG1-215ENST00000568239 PIGSQ96S52 555 aa8.11□□□□□ -1.11
SMG1-215ENST00000568239 TMEM39BQ9GZU3 492 aa8.11□□□□□ -1.11
SMG1-215ENST00000568239 CLSTN2Q9H4D0 955 aa8.11□□□□□ -1.11
SMG1-215ENST00000568239 NOL7Q9UMY1 257 aaKnown RBP8.11□□□□□ -1.11
SMG1-215ENST00000568239 PLIN4Q96Q06 1357 aa8.11□□□□□ -1.11
SMG1-215ENST00000568239 ZNF646O15015 1829 aaPredicted RBP8.11□□□□□ -1.11
SMG1-215ENST00000568239 GH2P01242 217 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 CCDC192P0DO97 292 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 CALML3P27482 149 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 SLC16A2P36021 539 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 NAPAP54920 295 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 ICA1Q05084 483 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 PTPAQ15257 358 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 ERCC4Q92889 916 aaPredicted RBP8.1□□□□□ -1.11
SMG1-215ENST00000568239 MYOZ2Q9NPC6 264 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 IGKV6D-41A0A0C4DH26 115 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 A0A1W2PQ27 194 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 A0A1W2PQ64 194 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 A0A1W2PQD8 194 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 TRIM75PA6NK02 468 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 WNT10BO00744 389 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 ADAMTS3O15072 1205 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 SNW1Q13573 536 aaKnown RBP8.1□□□□□ -1.11
SMG1-215ENST00000568239 ZNF174Q15697 407 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 TTBK2Q6IQ55 1244 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 TYW1BQ6NUM6 668 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 SASS6Q6UVJ0 657 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 BLIDQ8IZY5 108 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 CCDC148Q8NFR7 591 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 KANSL2Q9H9L4 492 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 CEP131Q9UPN4 1083 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 MRVI1Q9Y6F6 885 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 MYH4Q9Y623 1939 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 PSME4Q14997 1843 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 PPP6R2O75170 966 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 PFKFB1P16118 471 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 SLC1A4P43007 532 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 IKQ13123 557 aaPredicted RBP8.1□□□□□ -1.11
SMG1-215ENST00000568239 SPDYE2Q495Y8 402 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 ASPRV1Q53RT3 343 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 AXDND1Q5T1B0 1012 aaPredicted RBP8.1□□□□□ -1.11
SMG1-215ENST00000568239 ARHGAP27Q6ZUM4 889 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 TMEM179Q6ZVK1 233 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 CDAN1Q8IWY9 1227 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 KRI1Q8N9T8 703 aaKnown RBP8.1□□□□□ -1.11
SMG1-215ENST00000568239 FAM151AQ8WW52 585 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 SPZ1Q9BXG8 430 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 BARHL2Q9NY43 387 aa8.1□□□□□ -1.11
SMG1-215ENST00000568239 FER1L6Q2WGJ9 1857 aa8.09□□□□□ -1.11
SMG1-215ENST00000568239 CCDC194A0A1B0GVG4 234 aa8.09□□□□□ -1.11
SMG1-215ENST00000568239 EGFRP00533 1210 aa8.09□□□□□ -1.11
SMG1-215ENST00000568239 NOVP48745 357 aa8.09□□□□□ -1.11
SMG1-215ENST00000568239 NPY5RQ15761 445 aa8.09□□□□□ -1.11
SMG1-215ENST00000568239 PPP4R3BQ5MIZ7 849 aa8.09□□□□□ -1.11
SMG1-215ENST00000568239 TATDN1Q6P1N9 297 aa8.09□□□□□ -1.11
SMG1-215ENST00000568239 SAMD7Q7Z3H4 446 aa8.09□□□□□ -1.11
SMG1-215ENST00000568239 SPON1Q9HCB6 807 aa8.09□□□□□ -1.11
SMG1-215ENST00000568239 PCDHA4Q9UN74 947 aa8.09□□□□□ -1.11
SMG1-215ENST00000568239 BRCA1P38398 1863 aaKnown RBP8.09□□□□□ -1.11
SMG1-215ENST00000568239 SMCO2A6NFE2 343 aa8.09□□□□□ -1.11
SMG1-215ENST00000568239 STXBP3O00186 592 aa8.09□□□□□ -1.11
SMG1-215ENST00000568239 ZNF202O95125 648 aa8.09□□□□□ -1.11
SMG1-215ENST00000568239 CMA1P23946 247 aa8.09□□□□□ -1.11
SMG1-215ENST00000568239 MCM7P33993 719 aa8.09□□□□□ -1.11
SMG1-215ENST00000568239 SYKP43405 635 aa8.09□□□□□ -1.11
SMG1-215ENST00000568239 GMPSP49915 693 aaPredicted RBP8.09□□□□□ -1.11
SMG1-215ENST00000568239 GRIN1Q05586 938 aa8.09□□□□□ -1.11
SMG1-215ENST00000568239 TYRO3Q06418 890 aa8.09□□□□□ -1.11
SMG1-215ENST00000568239 ZNF543Q08ER8 600 aa8.09□□□□□ -1.11
SMG1-215ENST00000568239 TBC1D10BQ4KMP7 808 aaPredicted RBP8.09□□□□□ -1.11
SMG1-215ENST00000568239 TTC38Q5R3I4 469 aa8.09□□□□□ -1.11
SMG1-215ENST00000568239 SLFN13Q68D06 897 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms