RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 REM2Q8IYK8 340 aaPredicted RBP18.36■□□□□ 0.53
SPG7-218ENST00000568205 NUP133Q8WUM0 1156 aa18.36■□□□□ 0.53
SPG7-218ENST00000568205 ISY1Q9ULR0 285 aaKnown RBP18.36■□□□□ 0.53
SPG7-218ENST00000568205 GOLGA8BA8MQT2 603 aa18.35■□□□□ 0.53
SPG7-218ENST00000568205 USP17L15C9J2P7 530 aa18.35■□□□□ 0.53
SPG7-218ENST00000568205 USP17L13C9JLJ4 530 aa18.35■□□□□ 0.53
SPG7-218ENST00000568205 USP17L11C9JVI0 530 aa18.35■□□□□ 0.53
SPG7-218ENST00000568205 USP17L18D6R9N7 530 aa18.35■□□□□ 0.53
SPG7-218ENST00000568205 USP17L22D6RA61 530 aa18.35■□□□□ 0.53
SPG7-218ENST00000568205 USP17L17D6RBQ6 530 aa18.35■□□□□ 0.53
SPG7-218ENST00000568205 USP17L19D6RCP7 530 aa18.35■□□□□ 0.53
SPG7-218ENST00000568205 USP17L20D6RJB6 530 aa18.35■□□□□ 0.53
SPG7-218ENST00000568205 IGF2BP3O00425 579 aaKnown RBP eCLIP18.35■□□□□ 0.53
SPG7-218ENST00000568205 ZBTB43O43298 467 aa18.35■□□□□ 0.53
SPG7-218ENST00000568205 TM4SF4P48230 202 aa18.35■□□□□ 0.53
SPG7-218ENST00000568205 RCAN1P53805 252 aa18.35■□□□□ 0.53
SPG7-218ENST00000568205 ZNF543Q08ER8 600 aa18.35■□□□□ 0.53
SPG7-218ENST00000568205 USP17L24Q0WX57 530 aa18.35■□□□□ 0.53
SPG7-218ENST00000568205 PABPC4Q13310 644 aaKnown RBP eCLIP18.35■□□□□ 0.53
SPG7-218ENST00000568205 GRM4Q14833 912 aa18.35■□□□□ 0.53
SPG7-218ENST00000568205 MICU3Q86XE3 530 aa18.35■□□□□ 0.53
SPG7-218ENST00000568205 RAB11FIP4Q86YS3 637 aa18.35■□□□□ 0.53
SPG7-218ENST00000568205 FAM43AQ8N2R8 423 aa18.35■□□□□ 0.53
SPG7-218ENST00000568205 TANGO6Q9C0B7 1094 aa18.35■□□□□ 0.53
SPG7-218ENST00000568205 NAP1L2Q9ULW6 460 aaPredicted RBP18.35■□□□□ 0.53
SPG7-218ENST00000568205 FRMPD2Q68DX3 1309 aaPredicted RBP18.34■□□□□ 0.53
SPG7-218ENST00000568205 ST18O60284 1047 aa18.34■□□□□ 0.53
SPG7-218ENST00000568205 PARP1P09874 1014 aaKnown RBP18.34■□□□□ 0.53
SPG7-218ENST00000568205 CALM1P0DP23 149 aa18.34■□□□□ 0.53
SPG7-218ENST00000568205 CALM2P0DP24 149 aa18.34■□□□□ 0.53
SPG7-218ENST00000568205 CALM3P0DP25 149 aa18.34■□□□□ 0.53
SPG7-218ENST00000568205 RXRAP19793 462 aa18.34■□□□□ 0.53
SPG7-218ENST00000568205 HOXA7P31268 230 aaPredicted RBP18.34■□□□□ 0.53
SPG7-218ENST00000568205 ASPRV1Q53RT3 343 aa18.34■□□□□ 0.53
SPG7-218ENST00000568205 GPATCH4Q5T3I0 446 aaKnown RBP18.34■□□□□ 0.53
SPG7-218ENST00000568205 KCTD1Q719H9 257 aa18.34■□□□□ 0.53
SPG7-218ENST00000568205 IFNL1Q8IU54 200 aa18.34■□□□□ 0.53
SPG7-218ENST00000568205 MAP3K14Q99558 947 aa18.34■□□□□ 0.53
SPG7-218ENST00000568205 LARP6Q9BRS8 491 aaKnown RBP18.34■□□□□ 0.53
SPG7-218ENST00000568205 SLC45A1Q9Y2W3 748 aa18.34■□□□□ 0.53
SPG7-218ENST00000568205 LOC285556D6RIA3 1793 aa18.33■□□□□ 0.53
SPG7-218ENST00000568205 GOLGA8AA7E2F4 631 aa18.33■□□□□ 0.52
SPG7-218ENST00000568205 TMEM232C9JQI7 657 aa18.33■□□□□ 0.52
SPG7-218ENST00000568205 PDHXO00330 501 aa18.33■□□□□ 0.52
SPG7-218ENST00000568205 GOLGA8HP0CJ92 632 aa18.33■□□□□ 0.52
SPG7-218ENST00000568205 KIF5BP33176 963 aa18.33■□□□□ 0.52
SPG7-218ENST00000568205 OTUD7BQ6GQQ9 843 aa18.33■□□□□ 0.52
SPG7-218ENST00000568205 CATSPERGQ6ZRH7 1159 aa18.33■□□□□ 0.52
SPG7-218ENST00000568205 NOL8Q76FK4 1167 aaKnown RBP18.33■□□□□ 0.52
SPG7-218ENST00000568205 CTCFLQ8NI51 663 aaPredicted RBP18.33■□□□□ 0.52
SPG7-218ENST00000568205 ZCCHC17Q9NP64 241 aaKnown RBP18.33■□□□□ 0.52
SPG7-218ENST00000568205 GPCPD1Q9NPB8 672 aa18.33■□□□□ 0.52
SPG7-218ENST00000568205 HPS5Q9UPZ3 1129 aa18.33■□□□□ 0.52
SPG7-218ENST00000568205 PTPRFP10586 1907 aa18.32■□□□□ 0.52
SPG7-218ENST00000568205 MYH4Q9Y623 1939 aa18.32■□□□□ 0.52
SPG7-218ENST00000568205 PALM3A6NDB9 673 aaPredicted RBP18.32■□□□□ 0.52
SPG7-218ENST00000568205 FLOT1O75955 427 aa18.32■□□□□ 0.52
SPG7-218ENST00000568205 OSBPP22059 807 aa18.32■□□□□ 0.52
SPG7-218ENST00000568205 PDIA3P30101 505 aaKnown RBP18.32■□□□□ 0.52
SPG7-218ENST00000568205 IRX3P78415 501 aaPredicted RBP18.32■□□□□ 0.52
SPG7-218ENST00000568205 CCDC144CPQ8IYA2 1237 aa18.32■□□□□ 0.52
SPG7-218ENST00000568205 DNAJC5GQ8N7S2 189 aa18.32■□□□□ 0.52
SPG7-218ENST00000568205 FANCBQ8NB91 859 aa18.32■□□□□ 0.52
SPG7-218ENST00000568205 ZNF274Q96GC6 653 aaPredicted RBP18.32■□□□□ 0.52
SPG7-218ENST00000568205 ASCC2Q9H1I8 757 aaPredicted RBP18.32■□□□□ 0.52
SPG7-218ENST00000568205 FBXO28Q9NVF7 368 aa18.32■□□□□ 0.52
SPG7-218ENST00000568205 MAD2L2Q9UI95 211 aa18.32■□□□□ 0.52
SPG7-218ENST00000568205 FEM1BQ9UK73 627 aa18.32■□□□□ 0.52
SPG7-218ENST00000568205 PNMA3Q9UL41 463 aa18.32■□□□□ 0.52
SPG7-218ENST00000568205 TPCN1Q9ULQ1 816 aa18.32■□□□□ 0.52
SPG7-218ENST00000568205 NID2Q14112 1375 aa18.31■□□□□ 0.52
SPG7-218ENST00000568205 THSD7BQ9C0I4 1608 aa18.31■□□□□ 0.52
SPG7-218ENST00000568205 PLA2G6O60733 806 aa18.31■□□□□ 0.52
SPG7-218ENST00000568205 METAP2P50579 478 aaKnown RBP eCLIP18.31■□□□□ 0.52
SPG7-218ENST00000568205 STAT2P52630 851 aa18.31■□□□□ 0.52
SPG7-218ENST00000568205 IKQ13123 557 aaPredicted RBP18.31■□□□□ 0.52
SPG7-218ENST00000568205 RTN1Q16799 776 aa18.31■□□□□ 0.52
SPG7-218ENST00000568205 TTBK2Q6IQ55 1244 aa18.31■□□□□ 0.52
SPG7-218ENST00000568205 FAM160B2Q86V87 743 aa18.31■□□□□ 0.52
SPG7-218ENST00000568205 STAG2Q8N3U4 1231 aa18.31■□□□□ 0.52
SPG7-218ENST00000568205 CHURC1Q8WUH1 139 aa18.31■□□□□ 0.52
SPG7-218ENST00000568205 SLF1Q9BQI6 1058 aa18.31■□□□□ 0.52
SPG7-218ENST00000568205 LIMCH1Q9UPQ0 1083 aa18.31■□□□□ 0.52
SPG7-218ENST00000568205 KLRF2D3W0D1 207 aa18.3■□□□□ 0.52
SPG7-218ENST00000568205 CD2BP2O95400 341 aaKnown RBP18.3■□□□□ 0.52
SPG7-218ENST00000568205 ALDH1A1P00352 501 aa18.3■□□□□ 0.52
SPG7-218ENST00000568205 CYP2C8P10632 490 aa18.3■□□□□ 0.52
SPG7-218ENST00000568205 COG2Q14746 738 aa18.3■□□□□ 0.52
SPG7-218ENST00000568205 BTNL9Q6UXG8 535 aa18.3■□□□□ 0.52
SPG7-218ENST00000568205 PARK7Q99497 189 aaKnown RBP18.3■□□□□ 0.52
SPG7-218ENST00000568205 P2RX7Q99572 595 aaKnown RBP18.3■□□□□ 0.52
SPG7-218ENST00000568205 RBM28Q9NW13 759 aaKnown RBP18.3■□□□□ 0.52
SPG7-218ENST00000568205 PPP1R9AQ9ULJ8 1098 aa18.3■□□□□ 0.52
SPG7-218ENST00000568205 MYPNQ86TC9 1320 aa18.29■□□□□ 0.52
SPG7-218ENST00000568205 PFKFB2O60825 505 aa18.29■□□□□ 0.52
SPG7-218ENST00000568205 DSG3P32926 999 aa18.29■□□□□ 0.52
SPG7-218ENST00000568205 SLC16A2P36021 539 aa18.29■□□□□ 0.52
SPG7-218ENST00000568205 MCM2P49736 904 aa18.29■□□□□ 0.52
SPG7-218ENST00000568205 GNAQP50148 359 aa18.29■□□□□ 0.52
SPG7-218ENST00000568205 PPP2R5BQ15173 497 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms