RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 PRMT6Q96LA8 375 aaPredicted RBP7.23□□□□□ -1.25
CHD9-217ENST00000565832 ALG1Q9BT22 464 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 PIM2Q9P1W9 311 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 KCNJ14Q9UNX9 436 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 ATP6V1DQ9Y5K8 247 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 V9GY48 417 aaPredicted RBP7.23□□□□□ -1.25
CHD9-217ENST00000565832 MYH1P12882 1939 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 QSER1Q2KHR3 1735 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 SHTN1A0MZ66 631 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 FAM205CA6NFA0 338 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 PSMD14O00487 310 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 SLC3A2P08195 630 aaKnown RBP7.23□□□□□ -1.25
CHD9-217ENST00000565832 TSPY3P0CV98 308 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 TSPY8P0CW00 308 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 PBX2P40425 430 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 EIF6P56537 245 aaKnown RBP7.23□□□□□ -1.25
CHD9-217ENST00000565832 SSRP1Q08945 709 aaKnown RBP7.23□□□□□ -1.25
CHD9-217ENST00000565832 ZSCAN23Q3MJ62 389 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 SAMD7Q7Z3H4 446 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 CATIPQ7Z7H3 387 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 SLF2Q8IX21 1173 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 TMTC2Q8N394 836 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 STAG2Q8N3U4 1231 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 MTFR1LQ9H019 292 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 CPVLQ9H3G5 476 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 TDRD3Q9H7E2 651 aaKnown RBP7.23□□□□□ -1.25
CHD9-217ENST00000565832 STX8Q9UNK0 236 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 MAST2Q6P0Q8 1798 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 DDTLA6NHG4 134 aaPredicted RBP7.22□□□□□ -1.25
CHD9-217ENST00000565832 GOLGA8HP0CJ92 632 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 IFNAR1P17181 557 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 KRT85P78386 507 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 CCDC93Q567U6 631 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 PRPF38BQ5VTL8 546 aaKnown RBP7.22□□□□□ -1.25
CHD9-217ENST00000565832 KRT40Q6A162 431 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 TMED8Q6PL24 325 aaPredicted RBP7.22□□□□□ -1.25
CHD9-217ENST00000565832 HHIPL2Q6UWX4 724 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 SH3BP5LQ7L8J4 393 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 RTKN2Q8IZC4 609 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 SRBD1Q8N5C6 995 aaKnown RBP7.22□□□□□ -1.25
CHD9-217ENST00000565832 NLGN2Q8NFZ4 835 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 LEO1Q8WVC0 666 aaPredicted RBP7.22□□□□□ -1.25
CHD9-217ENST00000565832 PGBD1Q96JS3 809 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 ZDHHC15Q96MV8 337 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 USP28Q96RU2 1077 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 SUGT1Q9Y2Z0 365 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 SYCE3A1L190 88 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 ADAMTS3O15072 1205 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 FMNL1O95466 1100 aaPredicted RBP7.22□□□□□ -1.25
CHD9-217ENST00000565832 POLD1P28340 1107 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 FUT2Q10981 343 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 C16orf86Q6ZW13 317 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 ZNF687Q8N1G0 1237 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 CEP95Q96GE4 821 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 SPATA32Q96LK8 384 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 BCS1LQ9Y276 419 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 CLIC4Q9Y696 253 aa7.22□□□□□ -1.25
CHD9-217ENST00000565832 CLRN2A0PK11 232 aa7.21□□□□□ -1.26
CHD9-217ENST00000565832 BTBD18B2RXH4 712 aa7.21□□□□□ -1.26
CHD9-217ENST00000565832 RNF40O75150 1001 aa7.21□□□□□ -1.26
CHD9-217ENST00000565832 PCP11498 1178 aaKnown RBP7.21□□□□□ -1.26
CHD9-217ENST00000565832 AKR1B1P15121 316 aa7.21□□□□□ -1.26
CHD9-217ENST00000565832 LIG1P18858 919 aa7.21□□□□□ -1.26
CHD9-217ENST00000565832 PRELPP51888 382 aa7.21□□□□□ -1.26
CHD9-217ENST00000565832 TGFB2P61812 414 aa7.21□□□□□ -1.26
CHD9-217ENST00000565832 PKN1Q16512 942 aa7.21□□□□□ -1.26
CHD9-217ENST00000565832 CFAP100Q494V2 611 aa7.21□□□□□ -1.26
CHD9-217ENST00000565832 DALRD3Q5D0E6 543 aaKnown RBP7.21□□□□□ -1.26
CHD9-217ENST00000565832 CC2D2BQ6DHV5 1058 aa7.21□□□□□ -1.26
CHD9-217ENST00000565832 AMOTL1Q8IY63 956 aa7.21□□□□□ -1.26
CHD9-217ENST00000565832 TMEM87AQ8NBN3 555 aa7.21□□□□□ -1.26
CHD9-217ENST00000565832 PNMA1Q8ND90 353 aa7.21□□□□□ -1.26
CHD9-217ENST00000565832 PSMD1Q99460 953 aa7.21□□□□□ -1.26
CHD9-217ENST00000565832 TMEM47Q9BQJ4 181 aa7.21□□□□□ -1.26
CHD9-217ENST00000565832 OSBPL5Q9H0X9 879 aaPredicted RBP7.21□□□□□ -1.26
CHD9-217ENST00000565832 ZSCAN16Q9H4T2 348 aaPredicted RBP7.21□□□□□ -1.26
CHD9-217ENST00000565832 VPS54Q9P1Q0 977 aa7.21□□□□□ -1.26
CHD9-217ENST00000565832 LAMB1P07942 1786 aa7.21□□□□□ -1.26
CHD9-217ENST00000565832 NAV1Q8NEY1 1877 aa7.21□□□□□ -1.26
CHD9-217ENST00000565832 DDX60LQ5H9U9 1706 aaKnown RBP7.21□□□□□ -1.26
CHD9-217ENST00000565832 CDKL5O76039 1030 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 UBE2HP62256 183 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 KIF23Q02241 960 aaPredicted RBP7.2□□□□□ -1.26
CHD9-217ENST00000565832 GABPAQ06546 454 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 CXCL9Q07325 125 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 NR5A1Q13285 461 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 CAMK4Q16566 473 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 SLC35G1Q2M3R5 365 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 NOM1Q5C9Z4 860 aaKnown RBP7.2□□□□□ -1.26
CHD9-217ENST00000565832 CPLX2Q6PUV4 134 aaKnown RBP7.2□□□□□ -1.26
CHD9-217ENST00000565832 ZSCAN29Q8IWY8 852 aaPredicted RBP7.2□□□□□ -1.26
CHD9-217ENST00000565832 CDAN1Q8IWY9 1227 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 MTA3Q9BTC8 594 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 PANK2Q9BZ23 570 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 DNAJC18Q9H819 358 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 KAT14Q9H8E8 782 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 KIF3AQ9Y496 699 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 FSD2A1L4K1 749 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 TCP10L2B9ZVM9 353 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 NFKBIEO00221 500 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms