RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 IGHA2P01877 340 aa25.09■■□□□ 1.61
HERC2-204ENST00000563945 KCTD2Q14681 263 aa25.09■■□□□ 1.61
HERC2-204ENST00000563945 MYH8P13535 1937 aa25.08■■□□□ 1.61
HERC2-204ENST00000563945 ADCYAP1R1P41586 468 aa25.08■■□□□ 1.61
HERC2-204ENST00000563945 TMEM132BQ14DG7 1078 aa25.08■■□□□ 1.61
HERC2-204ENST00000563945 LRRCC1Q9C099 1032 aa25.08■■□□□ 1.61
HERC2-204ENST00000563945 LAMA3Q16787 3333 aa25.07■■□□□ 1.6
HERC2-204ENST00000563945 COPB2P35606 906 aa25.07■■□□□ 1.6
HERC2-204ENST00000563945 STAT3P40763 770 aa25.07■■□□□ 1.6
HERC2-204ENST00000563945 FERMT2Q96AC1 680 aa25.07■■□□□ 1.6
HERC2-204ENST00000563945 NRBP1Q9UHY1 535 aa25.07■■□□□ 1.6
HERC2-204ENST00000563945 ZNF236Q9UL36 1845 aa25.07■■□□□ 1.6
HERC2-204ENST00000563945 RARBP10826 455 aa25.06■■□□□ 1.6
HERC2-204ENST00000563945 LRRC41Q15345 812 aa25.06■■□□□ 1.6
HERC2-204ENST00000563945 CTR9Q6PD62 1173 aa25.06■■□□□ 1.6
HERC2-204ENST00000563945 MKNK2Q9HBH9 465 aa25.06■■□□□ 1.6
HERC2-204ENST00000563945 ARPP21Q9UBL0 812 aaPredicted RBP25.06■■□□□ 1.6
HERC2-204ENST00000563945 TRIM60Q495X7 471 aa25.05■■□□□ 1.6
HERC2-204ENST00000563945 FAM109BQ6ICB4 259 aaPredicted RBP25.05■■□□□ 1.6
HERC2-204ENST00000563945 RIOX2Q8IUF8 465 aa25.05■■□□□ 1.6
HERC2-204ENST00000563945 XPNPEP3Q9NQH7 507 aa25.05■■□□□ 1.6
HERC2-204ENST00000563945 FBXO28Q9NVF7 368 aa25.05■■□□□ 1.6
HERC2-204ENST00000563945 CTDP1Q9Y5B0 961 aaPredicted RBP25.05■■□□□ 1.6
HERC2-204ENST00000563945 BAZ2AQ9UIF9 1905 aaKnown RBP25.05■■□□□ 1.6
HERC2-204ENST00000563945 VWA5AO00534 786 aa25.04■■□□□ 1.6
HERC2-204ENST00000563945 FAM83BQ5T0W9 1011 aa25.04■■□□□ 1.6
HERC2-204ENST00000563945 RNF180Q86T96 592 aa25.04■■□□□ 1.6
HERC2-204ENST00000563945 PUS7LQ9H0K6 701 aaKnown RBP25.04■■□□□ 1.6
HERC2-204ENST00000563945 PPP1R9AQ9ULJ8 1098 aa25.04■■□□□ 1.6
HERC2-204ENST00000563945 ADAMTS5Q9UNA0 930 aa25.04■■□□□ 1.6
HERC2-204ENST00000563945 DIS3Q9Y2L1 958 aaKnown RBP25.04■■□□□ 1.6
HERC2-204ENST00000563945 SMIM22K7EJ46 135 aa25.03■■□□□ 1.6
HERC2-204ENST00000563945 PGK2P07205 417 aa25.03■■□□□ 1.6
HERC2-204ENST00000563945 FAM47AQ5JRC9 791 aa25.03■■□□□ 1.6
HERC2-204ENST00000563945 ZNF697Q5TEC3 545 aa25.03■■□□□ 1.6
HERC2-204ENST00000563945 GPATCH3Q96I76 525 aa25.03■■□□□ 1.6
HERC2-204ENST00000563945 TINF2Q9BSI4 451 aa25.03■■□□□ 1.6
HERC2-204ENST00000563945 RCAN3Q9UKA8 241 aa25.03■■□□□ 1.6
HERC2-204ENST00000563945 CNPY2Q9Y2B0 182 aa25.03■■□□□ 1.6
HERC2-204ENST00000563945 RLFQ13129 1914 aa25.03■■□□□ 1.6
HERC2-204ENST00000563945 POTEB2H3BUK9 544 aa25.02■■□□□ 1.6
HERC2-204ENST00000563945 CHGBP05060 677 aa25.02■■□□□ 1.6
HERC2-204ENST00000563945 STK11IPQ8N1F8 1099 aa25.02■■□□□ 1.6
HERC2-204ENST00000563945 BADQ92934 168 aa25.02■■□□□ 1.6
HERC2-204ENST00000563945 DDX11Q96FC9 970 aa25.02■■□□□ 1.6
HERC2-204ENST00000563945 FAM161BQ96MY7 647 aa25.02■■□□□ 1.6
HERC2-204ENST00000563945 ECHDC1Q9NTX5 307 aa25.02■■□□□ 1.6
HERC2-204ENST00000563945 A0A0G2JMZ2 1700 aa25.02■■□□□ 1.6
HERC2-204ENST00000563945 MINDY4BA8MYZ0 360 aa25.01■■□□□ 1.59
HERC2-204ENST00000563945 SMARCA5O60264 1052 aaPredicted RBP25.01■■□□□ 1.59
HERC2-204ENST00000563945 SLC4A3P48751 1232 aa25■■□□□ 1.59
HERC2-204ENST00000563945 TLE2Q04725 743 aa25■■□□□ 1.59
HERC2-204ENST00000563945 SNX17Q15036 470 aa25■■□□□ 1.59
HERC2-204ENST00000563945 SHHQ15465 462 aa25■■□□□ 1.59
HERC2-204ENST00000563945 ZNF792Q3KQV3 632 aa25■■□□□ 1.59
HERC2-204ENST00000563945 SBK1Q52WX2 424 aa25■■□□□ 1.59
HERC2-204ENST00000563945 C1orf53Q5VUE5 145 aa25■■□□□ 1.59
HERC2-204ENST00000563945 STRBPQ96SI9 672 aaKnown RBP25■■□□□ 1.59
HERC2-204ENST00000563945 SLF1Q9BQI6 1058 aa25■■□□□ 1.59
HERC2-204ENST00000563945 ZNF287Q9HBT7 754 aa25■■□□□ 1.59
HERC2-204ENST00000563945 TACC3Q9Y6A5 838 aa25■■□□□ 1.59
HERC2-204ENST00000563945 ZNFX1Q9P2E3 1918 aaKnown RBP25■■□□□ 1.59
HERC2-204ENST00000563945 AKR1A1P14550 325 aa24.99■■□□□ 1.59
HERC2-204ENST00000563945 GIMAP6Q6P9H5 292 aa24.99■■□□□ 1.59
HERC2-204ENST00000563945 TEX13BQ9BXU2 312 aa24.99■■□□□ 1.59
HERC2-204ENST00000563945 PDLIM7Q9NR12 457 aa24.99■■□□□ 1.59
HERC2-204ENST00000563945 NYAP2Q9P242 653 aa24.99■■□□□ 1.59
HERC2-204ENST00000563945 ZNF214Q9UL59 606 aaPredicted RBP24.99■■□□□ 1.59
HERC2-204ENST00000563945 PHF24Q9UPV7 400 aa24.99■■□□□ 1.59
HERC2-204ENST00000563945 F5H6K3 240 aa24.98■■□□□ 1.59
HERC2-204ENST00000563945 ZBED4O75132 1171 aa24.98■■□□□ 1.59
HERC2-204ENST00000563945 PGK1P00558 417 aa24.98■■□□□ 1.59
HERC2-204ENST00000563945 APPP05067 770 aa24.98■■□□□ 1.59
HERC2-204ENST00000563945 KLRC3Q07444 240 aa24.98■■□□□ 1.59
HERC2-204ENST00000563945 ZNF444Q8N0Y2 327 aaPredicted RBP24.98■■□□□ 1.59
HERC2-204ENST00000563945 PRPF38AQ8NAV1 312 aaKnown RBP24.98■■□□□ 1.59
HERC2-204ENST00000563945 LRRFIP1Q32MZ4 808 aaKnown RBP24.97■■□□□ 1.59
HERC2-204ENST00000563945 SNRNP48Q6IEG0 339 aaKnown RBP24.97■■□□□ 1.59
HERC2-204ENST00000563945 KBTBD3Q8NAB2 608 aa24.97■■□□□ 1.59
HERC2-204ENST00000563945 NUP88Q99567 741 aaPredicted RBP24.97■■□□□ 1.59
HERC2-204ENST00000563945 CLIP2Q9UDT6 1046 aa24.97■■□□□ 1.59
HERC2-204ENST00000563945 FAM184BQ9ULE4 1060 aa24.97■■□□□ 1.59
HERC2-204ENST00000563945 SMCHD1A6NHR9 2005 aa24.96■■□□□ 1.59
HERC2-204ENST00000563945 COL6A3P12111 3177 aa24.96■■□□□ 1.59
HERC2-204ENST00000563945 TRIM43BA6NCK2 446 aa24.96■■□□□ 1.59
HERC2-204ENST00000563945 CLTBP09497 229 aa24.96■■□□□ 1.59
HERC2-204ENST00000563945 GNAT2P19087 354 aa24.96■■□□□ 1.59
HERC2-204ENST00000563945 TDO2P48775 406 aa24.96■■□□□ 1.59
HERC2-204ENST00000563945 SH3RF1Q7Z6J0 888 aa24.96■■□□□ 1.59
HERC2-204ENST00000563945 MSL3Q8N5Y2 521 aaKnown RBP24.96■■□□□ 1.59
HERC2-204ENST00000563945 APPBP2Q92624 585 aa24.96■■□□□ 1.59
HERC2-204ENST00000563945 TRIM43Q96BQ3 446 aaPredicted RBP24.96■■□□□ 1.59
HERC2-204ENST00000563945 MYH7P12883 1935 aa24.96■■□□□ 1.59
HERC2-204ENST00000563945 CUL9Q8IWT3 2517 aa24.95■■□□□ 1.59
HERC2-204ENST00000563945 GSG1L2A8MUP6 293 aa24.95■■□□□ 1.58
HERC2-204ENST00000563945 RNF113AO15541 343 aaKnown RBP24.95■■□□□ 1.58
HERC2-204ENST00000563945 ZFYP08048 801 aaPredicted RBP24.95■■□□□ 1.58
HERC2-204ENST00000563945 RAG1P15918 1043 aa24.95■■□□□ 1.58
HERC2-204ENST00000563945 TAL1P17542 331 aaPredicted RBP24.95■■□□□ 1.58
HERC2-204ENST00000563945 RASA1P20936 1047 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms