RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 FBXO28Q9NVF7 368 aa22.57■■□□□ 1.2
TRADD-203ENST00000563348 TNRC18O15417 2968 aaPredicted RBP22.56■■□□□ 1.2
TRADD-203ENST00000563348 RBBP6Q7Z6E9 1792 aaKnown RBP22.56■■□□□ 1.2
TRADD-203ENST00000563348 SLC15A5A6NIM6 579 aa22.56■■□□□ 1.2
TRADD-203ENST00000563348 ORC4O43929 436 aa22.56■■□□□ 1.2
TRADD-203ENST00000563348 GJA8P48165 433 aa22.56■■□□□ 1.2
TRADD-203ENST00000563348 MAP2K5Q13163 448 aa22.56■■□□□ 1.2
TRADD-203ENST00000563348 TTC22Q5TAA0 569 aa22.56■■□□□ 1.2
TRADD-203ENST00000563348 WDR78Q5VTH9 848 aa22.56■■□□□ 1.2
TRADD-203ENST00000563348 TRMT44Q8IYL2 757 aaKnown RBP22.56■■□□□ 1.2
TRADD-203ENST00000563348 SHCBP1Q8NEM2 672 aa22.56■■□□□ 1.2
TRADD-203ENST00000563348 PPP1R9AQ9ULJ8 1098 aa22.56■■□□□ 1.2
TRADD-203ENST00000563348 RLFQ13129 1914 aa22.55■■□□□ 1.2
TRADD-203ENST00000563348 PPP4R3BQ5MIZ7 849 aa22.55■■□□□ 1.2
TRADD-203ENST00000563348 SAMD1Q6SPF0 538 aaPredicted RBP22.55■■□□□ 1.2
TRADD-203ENST00000563348 TRIB2Q92519 343 aa22.55■■□□□ 1.2
TRADD-203ENST00000563348 NUP88Q99567 741 aaPredicted RBP22.55■■□□□ 1.2
TRADD-203ENST00000563348 TSPY2A6NKD2 308 aa22.54■■□□□ 1.2
TRADD-203ENST00000563348 RANBP6O60518 1105 aaKnown RBP22.54■■□□□ 1.2
TRADD-203ENST00000563348 GSPT1P15170 499 aaKnown RBP22.54■■□□□ 1.2
TRADD-203ENST00000563348 ERCC3P19447 782 aa22.54■■□□□ 1.2
TRADD-203ENST00000563348 GMCL1P1Q8NEA9 526 aa22.54■■□□□ 1.2
TRADD-203ENST00000563348 U2AF1L4Q8WU68 220 aaKnown RBP22.54■■□□□ 1.2
TRADD-203ENST00000563348 SHISA4Q96DD7 197 aa22.54■■□□□ 1.2
TRADD-203ENST00000563348 PAK6Q9NQU5 681 aaPredicted RBP22.54■■□□□ 1.2
TRADD-203ENST00000563348 IL17RBQ9NRM6 502 aa22.54■■□□□ 1.2
TRADD-203ENST00000563348 IVNS1ABPQ9Y6Y0 642 aa22.54■■□□□ 1.2
TRADD-203ENST00000563348 PLXNB2O15031 1838 aa22.53■■□□□ 1.2
TRADD-203ENST00000563348 VWA5AO00534 786 aa22.53■■□□□ 1.2
TRADD-203ENST00000563348 STRNO43815 780 aa22.53■■□□□ 1.2
TRADD-203ENST00000563348 SGPL1O95470 568 aa22.53■■□□□ 1.2
TRADD-203ENST00000563348 CAPN2P17655 700 aa22.53■■□□□ 1.2
TRADD-203ENST00000563348 TRIM32Q13049 653 aa22.53■■□□□ 1.2
TRADD-203ENST00000563348 GRB14Q14449 540 aa22.53■■□□□ 1.2
TRADD-203ENST00000563348 PLS1Q14651 629 aa22.53■■□□□ 1.2
TRADD-203ENST00000563348 TMEM132BQ14DG7 1078 aa22.53■■□□□ 1.2
TRADD-203ENST00000563348 LRRC47Q8N1G4 583 aaKnown RBP22.53■■□□□ 1.2
TRADD-203ENST00000563348 APBA2Q99767 749 aa22.53■■□□□ 1.2
TRADD-203ENST00000563348 SLF1Q9BQI6 1058 aa22.53■■□□□ 1.2
TRADD-203ENST00000563348 MROH8Q9H579 483 aa22.53■■□□□ 1.2
TRADD-203ENST00000563348 HOXC6P09630 235 aa22.52■■□□□ 1.2
TRADD-203ENST00000563348 ZKSCAN1P17029 563 aaPredicted RBP22.52■■□□□ 1.2
TRADD-203ENST00000563348 HAND2P61296 217 aa22.52■■□□□ 1.2
TRADD-203ENST00000563348 SLFN13Q68D06 897 aa22.52■■□□□ 1.2
TRADD-203ENST00000563348 PRPF38AQ8NAV1 312 aaKnown RBP22.52■■□□□ 1.2
TRADD-203ENST00000563348 DEFB118Q96PH6 123 aa22.52■■□□□ 1.2
TRADD-203ENST00000563348 MKI67P46013 3256 aaKnown RBP22.52■■□□□ 1.2
TRADD-203ENST00000563348 RPTORQ8N122 1335 aa22.52■■□□□ 1.2
TRADD-203ENST00000563348 SLC25A27O95847 323 aa22.51■■□□□ 1.19
TRADD-203ENST00000563348 PCP11498 1178 aaKnown RBP22.51■■□□□ 1.19
TRADD-203ENST00000563348 STAT3P40763 770 aa22.51■■□□□ 1.19
TRADD-203ENST00000563348 NOVP48745 357 aa22.51■■□□□ 1.19
TRADD-203ENST00000563348 CCL14Q16627 93 aa22.51■■□□□ 1.19
TRADD-203ENST00000563348 MAP3K21Q5TCX8 1036 aa22.51■■□□□ 1.19
TRADD-203ENST00000563348 REPS2Q8NFH8 660 aa22.51■■□□□ 1.19
TRADD-203ENST00000563348 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.51■■□□□ 1.19
TRADD-203ENST00000563348 HMX1Q9NP08 348 aaPredicted RBP22.51■■□□□ 1.19
TRADD-203ENST00000563348 TOMM22Q9NS69 142 aa22.51■■□□□ 1.19
TRADD-203ENST00000563348 STX8Q9UNK0 236 aa22.51■■□□□ 1.19
TRADD-203ENST00000563348 NMT2O60551 498 aa22.5■■□□□ 1.19
TRADD-203ENST00000563348 AKNAD1Q5T1N1 836 aa22.5■■□□□ 1.19
TRADD-203ENST00000563348 MFSD6Q6ZSS7 791 aa22.5■■□□□ 1.19
TRADD-203ENST00000563348 NCAPG2Q86XI2 1143 aa22.5■■□□□ 1.19
TRADD-203ENST00000563348 RIOX2Q8IUF8 465 aa22.5■■□□□ 1.19
TRADD-203ENST00000563348 DSCC1Q9BVC3 393 aa22.5■■□□□ 1.19
TRADD-203ENST00000563348 NBPF3Q9H094 633 aa22.5■■□□□ 1.19
TRADD-203ENST00000563348 FEM1BQ9UK73 627 aa22.5■■□□□ 1.19
TRADD-203ENST00000563348 ZNF214Q9UL59 606 aaPredicted RBP22.5■■□□□ 1.19
TRADD-203ENST00000563348 ZNF213O14771 459 aa22.49■■□□□ 1.19
TRADD-203ENST00000563348 TFRCP02786 760 aaKnown RBP22.49■■□□□ 1.19
TRADD-203ENST00000563348 BMP3P12645 472 aa22.49■■□□□ 1.19
TRADD-203ENST00000563348 RRP12Q5JTH9 1297 aaKnown RBP22.49■■□□□ 1.19
TRADD-203ENST00000563348 ABRAQ8N0Z2 381 aa22.49■■□□□ 1.19
TRADD-203ENST00000563348 STAG1Q8WVM7 1258 aa22.49■■□□□ 1.19
TRADD-203ENST00000563348 CRISPLD2Q9H0B8 497 aa22.49■■□□□ 1.19
TRADD-203ENST00000563348 RNF41Q9H4P4 317 aaPredicted RBP22.49■■□□□ 1.19
TRADD-203ENST00000563348 TCP11L1Q9NUJ3 509 aa22.49■■□□□ 1.19
TRADD-203ENST00000563348 PRKAR2AP13861 404 aaKnown RBP22.48■■□□□ 1.19
TRADD-203ENST00000563348 ADORA2AP29274 412 aa22.48■■□□□ 1.19
TRADD-203ENST00000563348 CACNB2Q08289 660 aaPredicted RBP22.48■■□□□ 1.19
TRADD-203ENST00000563348 DPP9Q86TI2 863 aa22.48■■□□□ 1.19
TRADD-203ENST00000563348 TBC1D10CQ8IV04 446 aa22.48■■□□□ 1.19
TRADD-203ENST00000563348 NPLOC4Q8TAT6 608 aa22.48■■□□□ 1.19
TRADD-203ENST00000563348 GMCL1Q96IK5 515 aa22.48■■□□□ 1.19
TRADD-203ENST00000563348 FLRT1Q9NZU1 646 aa22.48■■□□□ 1.19
TRADD-203ENST00000563348 ZBED4O75132 1171 aa22.47■■□□□ 1.19
TRADD-203ENST00000563348 FCER1AP12319 257 aa22.47■■□□□ 1.19
TRADD-203ENST00000563348 COPB2P35606 906 aa22.47■■□□□ 1.19
TRADD-203ENST00000563348 UBE2Q1Q7Z7E8 422 aa22.47■■□□□ 1.19
TRADD-203ENST00000563348 KIFC2Q96AC6 838 aa22.47■■□□□ 1.19
TRADD-203ENST00000563348 IL25Q9H293 177 aa22.47■■□□□ 1.19
TRADD-203ENST00000563348 A0A0G2JMZ2 1700 aa22.47■■□□□ 1.19
TRADD-203ENST00000563348 ATP2A1O14983 1001 aa22.46■■□□□ 1.19
TRADD-203ENST00000563348 COBLO75128 1261 aa22.46■■□□□ 1.19
TRADD-203ENST00000563348 IGHA2P01877 340 aa22.46■■□□□ 1.19
TRADD-203ENST00000563348 MCCP23508 829 aa22.46■■□□□ 1.19
TRADD-203ENST00000563348 CHMLP26374 656 aa22.46■■□□□ 1.19
TRADD-203ENST00000563348 SLC1A4P43007 532 aa22.46■■□□□ 1.19
TRADD-203ENST00000563348 MFSD14CQ5VZR4 134 aa22.46■■□□□ 1.19
TRADD-203ENST00000563348 TEX13BQ9BXU2 312 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms