RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 SMARCA5O60264 1052 aaPredicted RBP15.59■□□□□ 0.09
SF3B3-202ENST00000562722 SLC25A27O95847 323 aa15.59■□□□□ 0.09
SF3B3-202ENST00000562722 KCTD2Q14681 263 aa15.59■□□□□ 0.09
SF3B3-202ENST00000562722 TMEM132BQ14DG7 1078 aa15.59■□□□□ 0.09
SF3B3-202ENST00000562722 STK11IPQ8N1F8 1099 aa15.59■□□□□ 0.09
SF3B3-202ENST00000562722 MAML3Q96JK9 1138 aa15.59■□□□□ 0.09
SF3B3-202ENST00000562722 ARPP21Q9UBL0 812 aaPredicted RBP15.59■□□□□ 0.09
SF3B3-202ENST00000562722 RCAN3Q9UKA8 241 aa15.59■□□□□ 0.09
SF3B3-202ENST00000562722 A0A0G2JMZ2 1700 aa15.59■□□□□ 0.09
SF3B3-202ENST00000562722 IGHA2P01877 340 aa15.58■□□□□ 0.08
SF3B3-202ENST00000562722 PGK2P07205 417 aa15.58■□□□□ 0.08
SF3B3-202ENST00000562722 FAM83BQ5T0W9 1011 aa15.58■□□□□ 0.08
SF3B3-202ENST00000562722 CTR9Q6PD62 1173 aa15.58■□□□□ 0.08
SF3B3-202ENST00000562722 FERMT2Q96AC1 680 aa15.58■□□□□ 0.08
SF3B3-202ENST00000562722 PUS7LQ9H0K6 701 aaKnown RBP15.58■□□□□ 0.08
SF3B3-202ENST00000562722 FBXO28Q9NVF7 368 aa15.58■□□□□ 0.08
SF3B3-202ENST00000562722 MYH8P13535 1937 aa15.58■□□□□ 0.08
SF3B3-202ENST00000562722 ADCYAP1R1P41586 468 aa15.57■□□□□ 0.08
SF3B3-202ENST00000562722 TRIM60Q495X7 471 aa15.57■□□□□ 0.08
SF3B3-202ENST00000562722 SLC39A5Q6ZMH5 540 aa15.57■□□□□ 0.08
SF3B3-202ENST00000562722 MKNK2Q9HBH9 465 aa15.57■□□□□ 0.08
SF3B3-202ENST00000562722 MTMR10Q9NXD2 777 aa15.57■□□□□ 0.08
SF3B3-202ENST00000562722 STXBP5LQ9Y2K9 1186 aa15.57■□□□□ 0.08
SF3B3-202ENST00000562722 BAZ2AQ9UIF9 1905 aaKnown RBP15.56■□□□□ 0.08
SF3B3-202ENST00000562722 MINDY4BA8MYZ0 360 aa15.56■□□□□ 0.08
SF3B3-202ENST00000562722 VWA5AO00534 786 aa15.56■□□□□ 0.08
SF3B3-202ENST00000562722 RARBP10826 455 aa15.56■□□□□ 0.08
SF3B3-202ENST00000562722 STAT3P40763 770 aa15.56■□□□□ 0.08
SF3B3-202ENST00000562722 LRRC41Q15345 812 aa15.56■□□□□ 0.08
SF3B3-202ENST00000562722 FAM47AQ5JRC9 791 aa15.56■□□□□ 0.08
SF3B3-202ENST00000562722 RIOX2Q8IUF8 465 aa15.56■□□□□ 0.08
SF3B3-202ENST00000562722 GPATCH3Q96I76 525 aa15.56■□□□□ 0.08
SF3B3-202ENST00000562722 XPNPEP3Q9NQH7 507 aa15.56■□□□□ 0.08
SF3B3-202ENST00000562722 ECHDC1Q9NTX5 307 aa15.56■□□□□ 0.08
SF3B3-202ENST00000562722 PPP1R9AQ9ULJ8 1098 aa15.56■□□□□ 0.08
SF3B3-202ENST00000562722 RLFQ13129 1914 aa15.55■□□□□ 0.08
SF3B3-202ENST00000562722 COPB2P35606 906 aa15.55■□□□□ 0.08
SF3B3-202ENST00000562722 SLC4A3P48751 1232 aa15.55■□□□□ 0.08
SF3B3-202ENST00000562722 C20orf194Q5TEA3 1177 aa15.55■□□□□ 0.08
SF3B3-202ENST00000562722 FAM161BQ96MY7 647 aa15.55■□□□□ 0.08
SF3B3-202ENST00000562722 NUP88Q99567 741 aaPredicted RBP15.55■□□□□ 0.08
SF3B3-202ENST00000562722 CNPY2Q9Y2B0 182 aa15.55■□□□□ 0.08
SF3B3-202ENST00000562722 CTDP1Q9Y5B0 961 aaPredicted RBP15.55■□□□□ 0.08
SF3B3-202ENST00000562722 TDO2P48775 406 aa15.54■□□□□ 0.08
SF3B3-202ENST00000562722 RNF180Q86T96 592 aa15.54■□□□□ 0.08
SF3B3-202ENST00000562722 STRBPQ96SI9 672 aaKnown RBP15.54■□□□□ 0.08
SF3B3-202ENST00000562722 SLF1Q9BQI6 1058 aa15.54■□□□□ 0.08
SF3B3-202ENST00000562722 TINF2Q9BSI4 451 aa15.54■□□□□ 0.08
SF3B3-202ENST00000562722 NRBP1Q9UHY1 535 aa15.54■□□□□ 0.08
SF3B3-202ENST00000562722 ADAMTS5Q9UNA0 930 aa15.54■□□□□ 0.08
SF3B3-202ENST00000562722 PGK1P00558 417 aa15.53■□□□□ 0.08
SF3B3-202ENST00000562722 APPP05067 770 aa15.53■□□□□ 0.08
SF3B3-202ENST00000562722 TSHZ3Q63HK5 1081 aa15.53■□□□□ 0.08
SF3B3-202ENST00000562722 SNRNP48Q6IEG0 339 aaKnown RBP15.53■□□□□ 0.08
SF3B3-202ENST00000562722 KBTBD3Q8NAB2 608 aa15.53■□□□□ 0.08
SF3B3-202ENST00000562722 BADQ92934 168 aa15.53■□□□□ 0.08
SF3B3-202ENST00000562722 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.53■□□□□ 0.08
SF3B3-202ENST00000562722 TEX13BQ9BXU2 312 aa15.53■□□□□ 0.08
SF3B3-202ENST00000562722 ZNF214Q9UL59 606 aaPredicted RBP15.53■□□□□ 0.08
SF3B3-202ENST00000562722 GSG1L2A8MUP6 293 aa15.52■□□□□ 0.08
SF3B3-202ENST00000562722 RNF113AO15541 343 aaKnown RBP15.52■□□□□ 0.08
SF3B3-202ENST00000562722 TAL1P17542 331 aaPredicted RBP15.52■□□□□ 0.08
SF3B3-202ENST00000562722 RASA1P20936 1047 aa15.52■□□□□ 0.08
SF3B3-202ENST00000562722 SNX17Q15036 470 aa15.52■□□□□ 0.08
SF3B3-202ENST00000562722 SHHQ15465 462 aa15.52■□□□□ 0.08
SF3B3-202ENST00000562722 ZNF792Q3KQV3 632 aa15.52■□□□□ 0.08
SF3B3-202ENST00000562722 SBK1Q52WX2 424 aa15.52■□□□□ 0.08
SF3B3-202ENST00000562722 ZNF697Q5TEC3 545 aa15.52■□□□□ 0.08
SF3B3-202ENST00000562722 GIMAP6Q6P9H5 292 aa15.52■□□□□ 0.08
SF3B3-202ENST00000562722 APPBP2Q92624 585 aa15.52■□□□□ 0.08
SF3B3-202ENST00000562722 DDX11Q96FC9 970 aa15.52■□□□□ 0.08
SF3B3-202ENST00000562722 ZNF287Q9HBT7 754 aa15.52■□□□□ 0.08
SF3B3-202ENST00000562722 PDLIM7Q9NR12 457 aa15.52■□□□□ 0.08
SF3B3-202ENST00000562722 CLIP2Q9UDT6 1046 aa15.52■□□□□ 0.08
SF3B3-202ENST00000562722 ISY1Q9ULR0 285 aaKnown RBP15.52■□□□□ 0.08
SF3B3-202ENST00000562722 PHF24Q9UPV7 400 aa15.52■□□□□ 0.08
SF3B3-202ENST00000562722 DIS3Q9Y2L1 958 aaKnown RBP15.52■□□□□ 0.08
SF3B3-202ENST00000562722 MYH7P12883 1935 aa15.52■□□□□ 0.07
SF3B3-202ENST00000562722 F5H6K3 240 aa15.51■□□□□ 0.07
SF3B3-202ENST00000562722 GPAA1O43292 621 aa15.51■□□□□ 0.07
SF3B3-202ENST00000562722 ZBED4O75132 1171 aa15.51■□□□□ 0.07
SF3B3-202ENST00000562722 PRDM1O75626 825 aa15.51■□□□□ 0.07
SF3B3-202ENST00000562722 NDUFB10O96000 172 aa15.51■□□□□ 0.07
SF3B3-202ENST00000562722 AKR1A1P14550 325 aa15.51■□□□□ 0.07
SF3B3-202ENST00000562722 TLE2Q04725 743 aa15.51■□□□□ 0.07
SF3B3-202ENST00000562722 KLRC3Q07444 240 aa15.51■□□□□ 0.07
SF3B3-202ENST00000562722 SH3RF1Q7Z6J0 888 aa15.51■□□□□ 0.07
SF3B3-202ENST00000562722 ZNF444Q8N0Y2 327 aaPredicted RBP15.51■□□□□ 0.07
SF3B3-202ENST00000562722 CPXCR1Q8N123 301 aa15.51■□□□□ 0.07
SF3B3-202ENST00000562722 REPS2Q8NFH8 660 aa15.51■□□□□ 0.07
SF3B3-202ENST00000562722 OSBP2Q969R2 916 aa15.51■□□□□ 0.07
SF3B3-202ENST00000562722 KIFC2Q96AC6 838 aa15.51■□□□□ 0.07
SF3B3-202ENST00000562722 LENG1Q96BZ8 264 aaPredicted RBP15.51■□□□□ 0.07
SF3B3-202ENST00000562722 NYAP2Q9P242 653 aa15.51■□□□□ 0.07
SF3B3-202ENST00000562722 ZHX1Q9UKY1 873 aaPredicted RBP15.51■□□□□ 0.07
SF3B3-202ENST00000562722 ROBO3Q96MS0 1386 aa15.5■□□□□ 0.07
SF3B3-202ENST00000562722 PARP14Q460N5 1801 aa15.5■□□□□ 0.07
SF3B3-202ENST00000562722 TRIM43BA6NCK2 446 aa15.5■□□□□ 0.07
SF3B3-202ENST00000562722 POTEB2H3BUK9 544 aa15.5■□□□□ 0.07
SF3B3-202ENST00000562722 PQBP1O60828 265 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms