RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 INTS4Q96HW7 963 aaKnown RBP26.25■■□□□ 1.79
SYNGR3-202ENST00000562045 UBAC1Q9BSL1 405 aa26.25■■□□□ 1.79
SYNGR3-202ENST00000562045 CFHR5Q9BXR6 569 aa26.25■■□□□ 1.79
SYNGR3-202ENST00000562045 ZCCHC17Q9NP64 241 aaKnown RBP26.25■■□□□ 1.79
SYNGR3-202ENST00000562045 F5H6K3 240 aa26.24■■□□□ 1.79
SYNGR3-202ENST00000562045 RAD21O60216 631 aa26.24■■□□□ 1.79
SYNGR3-202ENST00000562045 EVCP57679 992 aa26.24■■□□□ 1.79
SYNGR3-202ENST00000562045 KLRC3Q07444 240 aa26.24■■□□□ 1.79
SYNGR3-202ENST00000562045 TMEM67Q5HYA8 995 aa26.24■■□□□ 1.79
SYNGR3-202ENST00000562045 IGDCC4Q8TDY8 1250 aa26.24■■□□□ 1.79
SYNGR3-202ENST00000562045 NUP88Q99567 741 aaPredicted RBP26.24■■□□□ 1.79
SYNGR3-202ENST00000562045 ASCC2Q9H1I8 757 aaPredicted RBP26.24■■□□□ 1.79
SYNGR3-202ENST00000562045 RPAP3Q9H6T3 665 aaPredicted RBP26.24■■□□□ 1.79
SYNGR3-202ENST00000562045 SH2D4AQ9H788 454 aa26.24■■□□□ 1.79
SYNGR3-202ENST00000562045 ADGRA2Q96PE1 1338 aa26.24■■□□□ 1.79
SYNGR3-202ENST00000562045 LARGE1O95461 756 aa26.23■■□□□ 1.79
SYNGR3-202ENST00000562045 NDUFB10O96000 172 aa26.23■■□□□ 1.79
SYNGR3-202ENST00000562045 APOBRQ0VD83 1088 aa26.23■■□□□ 1.79
SYNGR3-202ENST00000562045 POTEEQ6S8J3 1075 aa26.23■■□□□ 1.79
SYNGR3-202ENST00000562045 TMEM47Q9BQJ4 181 aa26.23■■□□□ 1.79
SYNGR3-202ENST00000562045 SLC45A1Q9Y2W3 748 aa26.23■■□□□ 1.79
SYNGR3-202ENST00000562045 CASP8AP2Q9UKL3 1982 aa26.22■■□□□ 1.79
SYNGR3-202ENST00000562045 PEX10O60683 326 aa26.22■■□□□ 1.79
SYNGR3-202ENST00000562045 HOXA7P31268 230 aaPredicted RBP26.22■■□□□ 1.79
SYNGR3-202ENST00000562045 LIFRP42702 1097 aa26.22■■□□□ 1.79
SYNGR3-202ENST00000562045 ENAHQ8N8S7 591 aaPredicted RBP26.22■■□□□ 1.79
SYNGR3-202ENST00000562045 ZNF274Q96GC6 653 aaPredicted RBP26.22■■□□□ 1.79
SYNGR3-202ENST00000562045 ZSCAN10Q96SZ4 725 aaPredicted RBP26.22■■□□□ 1.79
SYNGR3-202ENST00000562045 GPHNQ9NQX3 736 aaPredicted RBP26.22■■□□□ 1.79
SYNGR3-202ENST00000562045 TNKSO95271 1327 aa26.22■■□□□ 1.79
SYNGR3-202ENST00000562045 P2RX7Q99572 595 aaKnown RBP26.22■■□□□ 1.79
SYNGR3-202ENST00000562045 SLKQ9H2G2 1235 aaPredicted RBP26.22■■□□□ 1.79
SYNGR3-202ENST00000562045 SENP2Q9HC62 589 aa26.22■■□□□ 1.79
SYNGR3-202ENST00000562045 ZSWIM8A7E2V4 1837 aa26.21■■□□□ 1.79
SYNGR3-202ENST00000562045 LBX1P52954 281 aa26.21■■□□□ 1.79
SYNGR3-202ENST00000562045 CATSPERGQ6ZRH7 1159 aa26.21■■□□□ 1.79
SYNGR3-202ENST00000562045 SGMS1Q86VZ5 419 aa26.21■■□□□ 1.79
SYNGR3-202ENST00000562045 TMTC2Q8N394 836 aa26.21■■□□□ 1.79
SYNGR3-202ENST00000562045 LY9Q9HBG7 655 aa26.21■■□□□ 1.79
SYNGR3-202ENST00000562045 ZFYVE28Q9HCC9 887 aa26.21■■□□□ 1.79
SYNGR3-202ENST00000562045 GOPCQ9HD26 462 aa26.21■■□□□ 1.79
SYNGR3-202ENST00000562045 FOXD4L1Q9NU39 408 aa26.21■■□□□ 1.79
SYNGR3-202ENST00000562045 CPA4Q9UI42 421 aa26.21■■□□□ 1.79
SYNGR3-202ENST00000562045 TLR2O60603 784 aa26.2■■□□□ 1.79
SYNGR3-202ENST00000562045 WTAPQ15007 396 aa26.2■■□□□ 1.79
SYNGR3-202ENST00000562045 FAM83BQ5T0W9 1011 aa26.2■■□□□ 1.79
SYNGR3-202ENST00000562045 LPAR1Q92633 364 aa26.2■■□□□ 1.79
SYNGR3-202ENST00000562045 MTMR7Q9Y216 660 aa26.2■■□□□ 1.79
SYNGR3-202ENST00000562045 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.2■■□□□ 1.79
SYNGR3-202ENST00000562045 SEC23AQ15436 765 aa26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 GMCL1P1Q8NEA9 526 aa26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 PARK7Q99497 189 aaKnown RBP26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 KLF18A0A0U1RQI7 1052 aa26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 USP17L15C9J2P7 530 aa26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 USP17L13C9JLJ4 530 aa26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 USP17L11C9JVI0 530 aa26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 USP17L18D6R9N7 530 aa26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 USP17L22D6RA61 530 aa26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 USP17L17D6RBQ6 530 aa26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 USP17L19D6RCP7 530 aa26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 USP17L20D6RJB6 530 aa26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 USP17L24Q0WX57 530 aa26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 STK3Q13188 491 aa26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 SLFN13Q68D06 897 aa26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 NFXL1Q6ZNB6 911 aa26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 CCDC83Q8IWF9 413 aa26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 GTF3C6Q969F1 213 aa26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 TANGO6Q9C0B7 1094 aa26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 CWC22Q9HCG8 908 aaKnown RBP26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 FBXO28Q9NVF7 368 aa26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 NAP1L2Q9ULW6 460 aaPredicted RBP26.19■■□□□ 1.78
SYNGR3-202ENST00000562045 GPR25O00155 361 aa26.18■■□□□ 1.78
SYNGR3-202ENST00000562045 PFKFB2O60825 505 aa26.18■■□□□ 1.78
SYNGR3-202ENST00000562045 TOP1P11387 765 aaKnown RBP26.18■■□□□ 1.78
SYNGR3-202ENST00000562045 PDIA3P30101 505 aaKnown RBP26.18■■□□□ 1.78
SYNGR3-202ENST00000562045 CTCFP49711 727 aaPredicted RBP26.18■■□□□ 1.78
SYNGR3-202ENST00000562045 IRX3P78415 501 aaPredicted RBP26.18■■□□□ 1.78
SYNGR3-202ENST00000562045 CAP1Q01518 475 aa26.18■■□□□ 1.78
SYNGR3-202ENST00000562045 CCDC178Q5BJE1 867 aa26.18■■□□□ 1.78
SYNGR3-202ENST00000562045 C17orf99Q6UX52 265 aa26.18■■□□□ 1.78
SYNGR3-202ENST00000562045 DGKHQ86XP1 1220 aa26.18■■□□□ 1.78
SYNGR3-202ENST00000562045 BRPF3Q9ULD4 1205 aa26.18■■□□□ 1.78
SYNGR3-202ENST00000562045 CCDC69A6NI79 296 aa26.17■■□□□ 1.78
SYNGR3-202ENST00000562045 WDR46O15213 610 aaKnown RBP26.17■■□□□ 1.78
SYNGR3-202ENST00000562045 OSBPP22059 807 aa26.17■■□□□ 1.78
SYNGR3-202ENST00000562045 PABPC4Q13310 644 aaKnown RBP eCLIP26.17■■□□□ 1.78
SYNGR3-202ENST00000562045 NECAB1Q8N987 351 aa26.17■■□□□ 1.78
SYNGR3-202ENST00000562045 ANKS1AQ92625 1134 aa26.17■■□□□ 1.78
SYNGR3-202ENST00000562045 PNMA3Q9UL41 463 aa26.17■■□□□ 1.78
SYNGR3-202ENST00000562045 SYNPO2Q9UMS6 1093 aa26.17■■□□□ 1.78
SYNGR3-202ENST00000562045 HERVK_113P62684 666 aa26.17■■□□□ 1.78
SYNGR3-202ENST00000562045 SMCR8Q8TEV9 937 aaPredicted RBP26.17■■□□□ 1.78
SYNGR3-202ENST00000562045 ZNF296Q8WUU4 475 aaPredicted RBP26.17■■□□□ 1.78
SYNGR3-202ENST00000562045 COL11A1P12107 1806 aaPredicted RBP26.16■■□□□ 1.78
SYNGR3-202ENST00000562045 GOLGA8BA8MQT2 603 aa26.16■■□□□ 1.78
SYNGR3-202ENST00000562045 ST3GAL1Q11201 340 aa26.16■■□□□ 1.78
SYNGR3-202ENST00000562045 PPP4R3BQ5MIZ7 849 aa26.16■■□□□ 1.78
SYNGR3-202ENST00000562045 APOA5Q6Q788 366 aa26.16■■□□□ 1.78
SYNGR3-202ENST00000562045 TXNRD2Q9NNW7 524 aa26.16■■□□□ 1.78
SYNGR3-202ENST00000562045 A0A0G2JMZ2 1700 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms