RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 SMAD7O15105 426 aaKnown RBP7.54□□□□□ -1.2
USP8-218ENST00000561330 TP53P04637 393 aaPredicted RBP7.54□□□□□ -1.2
USP8-218ENST00000561330 SNW1Q13573 536 aaKnown RBP7.54□□□□□ -1.2
USP8-218ENST00000561330 GNPTABQ3T906 1256 aa7.54□□□□□ -1.2
USP8-218ENST00000561330 SLC23A3Q6PIS1 610 aa7.54□□□□□ -1.2
USP8-218ENST00000561330 TMC3Q7Z5M5 1100 aa7.54□□□□□ -1.2
USP8-218ENST00000561330 PPFIBP1Q86W92 1011 aa7.54□□□□□ -1.2
USP8-218ENST00000561330 C7orf61Q8IZ16 206 aa7.54□□□□□ -1.2
USP8-218ENST00000561330 SYTL5Q8TDW5 730 aaPredicted RBP7.54□□□□□ -1.2
USP8-218ENST00000561330 FAM86C1Q9NVL1 165 aa7.54□□□□□ -1.2
USP8-218ENST00000561330 PRKAG3Q9UGI9 489 aa7.54□□□□□ -1.2
USP8-218ENST00000561330 ESR1P03372 595 aa7.53□□□□□ -1.2
USP8-218ENST00000561330 LTKP29376 864 aa7.53□□□□□ -1.2
USP8-218ENST00000561330 ETFBP38117 255 aa7.53□□□□□ -1.2
USP8-218ENST00000561330 SLC7A5Q01650 507 aa7.53□□□□□ -1.2
USP8-218ENST00000561330 ZNF792Q3KQV3 632 aa7.53□□□□□ -1.2
USP8-218ENST00000561330 AXDND1Q5T1B0 1012 aaPredicted RBP7.53□□□□□ -1.2
USP8-218ENST00000561330 SIGLEC6O43699 453 aa7.52□□□□□ -1.21
USP8-218ENST00000561330 ANKRD39Q53RE8 183 aa7.52□□□□□ -1.21
USP8-218ENST00000561330 ZNF655Q8N720 491 aaPredicted RBP7.52□□□□□ -1.21
USP8-218ENST00000561330 DAGLBQ8NCG7 672 aa7.52□□□□□ -1.21
USP8-218ENST00000561330 HDAC8Q9BY41 377 aa7.52□□□□□ -1.21
USP8-218ENST00000561330 ZNF408Q9H9D4 720 aa7.52□□□□□ -1.21
USP8-218ENST00000561330 PRDM7Q9NQW5 492 aa7.52□□□□□ -1.21
USP8-218ENST00000561330 MBNL3Q9NUK0 354 aaKnown RBP7.52□□□□□ -1.21
USP8-218ENST00000561330 GFOD1Q9NXC2 390 aa7.52□□□□□ -1.21
USP8-218ENST00000561330 PCDHB10Q9UN67 800 aa7.52□□□□□ -1.21
USP8-218ENST00000561330 PRAMEF1O95521 474 aa7.51□□□□□ -1.21
USP8-218ENST00000561330 EGR3Q06889 387 aa7.51□□□□□ -1.21
USP8-218ENST00000561330 DCAF15Q66K64 600 aa7.51□□□□□ -1.21
USP8-218ENST00000561330 VHLLQ6RSH7 139 aa7.51□□□□□ -1.21
USP8-218ENST00000561330 TANGO6Q9C0B7 1094 aa7.51□□□□□ -1.21
USP8-218ENST00000561330 CHST7Q9NS84 486 aa7.51□□□□□ -1.21
USP8-218ENST00000561330 ACTR10Q9NZ32 417 aa7.51□□□□□ -1.21
USP8-218ENST00000561330 PRR13Q9NZ81 148 aa7.51□□□□□ -1.21
USP8-218ENST00000561330 ADGRE2Q9UHX3 823 aa7.51□□□□□ -1.21
USP8-218ENST00000561330 ADAMTS6Q9UKP5 1117 aa7.51□□□□□ -1.21
USP8-218ENST00000561330 PCDHA11Q9Y5I1 949 aa7.51□□□□□ -1.21
USP8-218ENST00000561330 SHOXO15266 292 aa7.5□□□□□ -1.21
USP8-218ENST00000561330 RNASE1P07998 156 aaKnown RBP7.5□□□□□ -1.21
USP8-218ENST00000561330 IRAK1P51617 712 aa7.5□□□□□ -1.21
USP8-218ENST00000561330 TCEAL1Q15170 157 aa7.5□□□□□ -1.21
USP8-218ENST00000561330 NOL9Q5SY16 702 aaKnown RBP7.5□□□□□ -1.21
USP8-218ENST00000561330 TCTN2Q96GX1 697 aa7.5□□□□□ -1.21
USP8-218ENST00000561330 ALPK1Q96QP1 1244 aa7.5□□□□□ -1.21
USP8-218ENST00000561330 RC3H2Q9HBD1 1191 aaKnown RBP7.5□□□□□ -1.21
USP8-218ENST00000561330 R3HCC1Q9Y3T6 440 aaKnown RBP7.5□□□□□ -1.21
USP8-218ENST00000561330 SSU72P8A0A1W2PR75 194 aa7.49□□□□□ -1.21
USP8-218ENST00000561330 ATP2B1P20020 1258 aa7.49□□□□□ -1.21
USP8-218ENST00000561330 NCAPHQ15003 741 aa7.49□□□□□ -1.21
USP8-218ENST00000561330 HEATR6Q6AI08 1181 aaKnown RBP7.49□□□□□ -1.21
USP8-218ENST00000561330 KIAA1211LQ6NV74 962 aa7.49□□□□□ -1.21
USP8-218ENST00000561330 SYTL4Q96C24 671 aaPredicted RBP7.49□□□□□ -1.21
USP8-218ENST00000561330 CCDC120Q96HB5 630 aa7.49□□□□□ -1.21
USP8-218ENST00000561330 HAUS7Q99871 368 aa7.49□□□□□ -1.21
USP8-218ENST00000561330 DSCC1Q9BVC3 393 aa7.49□□□□□ -1.21
USP8-218ENST00000561330 GP6Q9HCN6 339 aa7.49□□□□□ -1.21
USP8-218ENST00000561330 SLAMF8Q9P0V8 285 aa7.49□□□□□ -1.21
USP8-218ENST00000561330 MEIS1O00470 390 aa7.48□□□□□ -1.21
USP8-218ENST00000561330 CBFA2T2O43439 604 aa7.48□□□□□ -1.21
USP8-218ENST00000561330 ITGA4P13612 1032 aa7.48□□□□□ -1.21
USP8-218ENST00000561330 CD247P20963 164 aa7.48□□□□□ -1.21
USP8-218ENST00000561330 PCBP3P57721 371 aaKnown RBP7.48□□□□□ -1.21
USP8-218ENST00000561330 ZNF445P59923 1031 aa7.48□□□□□ -1.21
USP8-218ENST00000561330 LARP1BQ659C4 914 aaKnown RBP7.48□□□□□ -1.21
USP8-218ENST00000561330 RNF111Q6ZNA4 994 aa7.48□□□□□ -1.21
USP8-218ENST00000561330 CBLL1Q75N03 491 aa7.48□□□□□ -1.21
USP8-218ENST00000561330 KLHL6Q8WZ60 621 aa7.48□□□□□ -1.21
USP8-218ENST00000561330 GBP3Q9H0R5 595 aa7.48□□□□□ -1.21
USP8-218ENST00000561330 MINPP1Q9UNW1 487 aa7.48□□□□□ -1.21
USP8-218ENST00000561330 ZNF451Q9Y4E5 1061 aa7.48□□□□□ -1.21
USP8-218ENST00000561330 STK10O94804 968 aaKnown RBP7.47□□□□□ -1.21
USP8-218ENST00000561330 FXNQ16595 210 aa7.47□□□□□ -1.21
USP8-218ENST00000561330 ANKS3Q6ZW76 656 aa7.47□□□□□ -1.21
USP8-218ENST00000561330 ADAT2Q7Z6V5 191 aaKnown RBP7.47□□□□□ -1.21
USP8-218ENST00000561330 USHBP1Q8N6Y0 703 aa7.47□□□□□ -1.21
USP8-218ENST00000561330 LINC00116Q8NCU8 138 aa7.47□□□□□ -1.21
USP8-218ENST00000561330 LRRN4CLQ8ND94 238 aa7.47□□□□□ -1.21
USP8-218ENST00000561330 BRF1Q92994 677 aa7.47□□□□□ -1.21
USP8-218ENST00000561330 FOXP3Q9BZS1 431 aa7.47□□□□□ -1.21
USP8-218ENST00000561330 KLHL25Q9H0H3 589 aa7.47□□□□□ -1.21
USP8-218ENST00000561330 WHRNQ9P202 907 aa7.47□□□□□ -1.21
USP8-218ENST00000561330 TCFL5Q9UL49 500 aa7.47□□□□□ -1.21
USP8-218ENST00000561330 FHOD1Q9Y613 1164 aa7.47□□□□□ -1.21
USP8-218ENST00000561330 A0A087WZG4 1122 aa7.46□□□□□ -1.22
USP8-218ENST00000561330 EPHX1P07099 455 aa7.46□□□□□ -1.22
USP8-218ENST00000561330 SYPP08247 313 aa7.46□□□□□ -1.22
USP8-218ENST00000561330 TEKQ02763 1124 aa7.46□□□□□ -1.22
USP8-218ENST00000561330 CWF19L1Q69YN2 538 aaKnown RBP7.46□□□□□ -1.22
USP8-218ENST00000561330 FIBCD1Q8N539 461 aa7.46□□□□□ -1.22
USP8-218ENST00000561330 HNRNPLLQ8WVV9 542 aaKnown RBP7.46□□□□□ -1.22
USP8-218ENST00000561330 DHX38Q92620 1227 aaKnown RBP7.46□□□□□ -1.22
USP8-218ENST00000561330 ADAMTS10Q9H324 1103 aa7.46□□□□□ -1.22
USP8-218ENST00000561330 PPP1R1BQ9UD71 204 aaPredicted RBP7.46□□□□□ -1.22
USP8-218ENST00000561330 TMEM59LQ9UK28 342 aa7.46□□□□□ -1.22
USP8-218ENST00000561330 DNAJC25-GNG10A0A024R161 153 aa7.45□□□□□ -1.22
USP8-218ENST00000561330 ANKRD34BA5PLL1 514 aa7.45□□□□□ -1.22
USP8-218ENST00000561330 PPM1BO75688 479 aa7.45□□□□□ -1.22
USP8-218ENST00000561330 DDAH1O94760 285 aa7.45□□□□□ -1.22
USP8-218ENST00000561330 GSNP06396 782 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms