RNA–Protein interactions for RNA: ENST00000561078.5

SPG21-213, Transcript of SPG21, maspardin, humanhuman

TSL 5

Gene SPG21, Length 1,520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-213ENST00000561078 RBPJLQ9UBG7 517 aa17.51■□□□□ 0.39
SPG21-213ENST00000561078 CIZ1Q9ULV3 898 aaPredicted RBP17.51■□□□□ 0.39
SPG21-213ENST00000561078 TMX2Q9Y320 296 aa17.51■□□□□ 0.39
SPG21-213ENST00000561078 A0A1W2PRG0 241 aa17.5■□□□□ 0.39
SPG21-213ENST00000561078 MCM5P33992 734 aa17.5■□□□□ 0.39
SPG21-213ENST00000561078 ZYXQ15942 572 aaKnown RBP17.5■□□□□ 0.39
SPG21-213ENST00000561078 SIAH1Q8IUQ4 282 aa17.5■□□□□ 0.39
SPG21-213ENST00000561078 SH3TC2Q8TF17 1288 aa17.5■□□□□ 0.39
SPG21-213ENST00000561078 INTS4Q96HW7 963 aaKnown RBP17.5■□□□□ 0.39
SPG21-213ENST00000561078 LARP6Q9BRS8 491 aaKnown RBP17.5■□□□□ 0.39
SPG21-213ENST00000561078 GABRQQ9UN88 632 aa17.5■□□□□ 0.39
SPG21-213ENST00000561078 RABGAP1Q9Y3P9 1069 aa17.5■□□□□ 0.39
SPG21-213ENST00000561078 MINDY4BA8MYZ0 360 aa17.49■□□□□ 0.39
SPG21-213ENST00000561078 ECM2O94769 699 aaPredicted RBP17.49■□□□□ 0.39
SPG21-213ENST00000561078 MAPK4P31152 587 aa17.49■□□□□ 0.39
SPG21-213ENST00000561078 UBXN2AP68543 259 aa17.49■□□□□ 0.39
SPG21-213ENST00000561078 ICA1Q05084 483 aa17.49■□□□□ 0.39
SPG21-213ENST00000561078 TBC1D10CQ8IV04 446 aa17.49■□□□□ 0.39
SPG21-213ENST00000561078 RNF41Q9H4P4 317 aaPredicted RBP17.49■□□□□ 0.39
SPG21-213ENST00000561078 CNNM2Q9H8M5 875 aa17.49■□□□□ 0.39
SPG21-213ENST00000561078 MKNK2Q9HBH9 465 aa17.49■□□□□ 0.39
SPG21-213ENST00000561078 HOXC10Q9NYD6 342 aa17.49■□□□□ 0.39
SPG21-213ENST00000561078 POTEFA5A3E0 1075 aa17.48■□□□□ 0.39
SPG21-213ENST00000561078 SMIM22K7EJ46 135 aa17.48■□□□□ 0.39
SPG21-213ENST00000561078 ADCY3O60266 1144 aa17.48■□□□□ 0.39
SPG21-213ENST00000561078 CAPN2P17655 700 aa17.48■□□□□ 0.39
SPG21-213ENST00000561078 ERVK-9P63128 1117 aa17.48■□□□□ 0.39
SPG21-213ENST00000561078 ERVK-24P63145 666 aa17.48■□□□□ 0.39
SPG21-213ENST00000561078 CTDSPL2Q05D32 466 aa17.48■□□□□ 0.39
SPG21-213ENST00000561078 COG2Q14746 738 aa17.48■□□□□ 0.39
SPG21-213ENST00000561078 MFSD6Q6ZSS7 791 aa17.48■□□□□ 0.39
SPG21-213ENST00000561078 RPAP3Q9H6T3 665 aaPredicted RBP17.48■□□□□ 0.39
SPG21-213ENST00000561078 TXNRD2Q9NNW7 524 aa17.48■□□□□ 0.39
SPG21-213ENST00000561078 GJD2Q9UKL4 321 aa17.48■□□□□ 0.39
SPG21-213ENST00000561078 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.48■□□□□ 0.39
SPG21-213ENST00000561078 ZSWIM8A7E2V4 1837 aa17.48■□□□□ 0.39
SPG21-213ENST00000561078 WDR19Q8NEZ3 1342 aa17.47■□□□□ 0.39
SPG21-213ENST00000561078 PRC1O43663 620 aa17.47■□□□□ 0.39
SPG21-213ENST00000561078 SLC3A2P08195 630 aaKnown RBP17.47■□□□□ 0.39
SPG21-213ENST00000561078 CCNA1P78396 465 aa17.47■□□□□ 0.39
SPG21-213ENST00000561078 EXOSC10Q01780 885 aaKnown RBP17.47■□□□□ 0.39
SPG21-213ENST00000561078 PPARAQ07869 468 aa17.47■□□□□ 0.39
SPG21-213ENST00000561078 COL9A3Q14050 684 aaPredicted RBP17.47■□□□□ 0.39
SPG21-213ENST00000561078 TOB2Q14106 344 aaPredicted RBP17.47■□□□□ 0.39
SPG21-213ENST00000561078 AKNAD1Q5T1N1 836 aa17.47■□□□□ 0.39
SPG21-213ENST00000561078 LRRC2Q9BYS8 371 aa17.47■□□□□ 0.39
SPG21-213ENST00000561078 KRT23Q9C075 422 aa17.47■□□□□ 0.39
SPG21-213ENST00000561078 NBPF3Q9H094 633 aa17.47■□□□□ 0.39
SPG21-213ENST00000561078 VCPKMTQ9H867 229 aa17.47■□□□□ 0.39
SPG21-213ENST00000561078 TOMM22Q9NS69 142 aa17.47■□□□□ 0.39
SPG21-213ENST00000561078 RASA1P20936 1047 aa17.47■□□□□ 0.39
SPG21-213ENST00000561078 Q3C1V9 767 aa17.47■□□□□ 0.39
SPG21-213ENST00000561078 MB21D2Q8IYB1 491 aaPredicted RBP17.47■□□□□ 0.39
SPG21-213ENST00000561078 ZNF444Q8N0Y2 327 aaPredicted RBP17.47■□□□□ 0.39
SPG21-213ENST00000561078 NKX2-3Q8TAU0 364 aa17.47■□□□□ 0.39
SPG21-213ENST00000561078 STAG1Q8WVM7 1258 aa17.47■□□□□ 0.39
SPG21-213ENST00000561078 BRF1Q92994 677 aa17.47■□□□□ 0.39
SPG21-213ENST00000561078 TPCN1Q9ULQ1 816 aa17.47■□□□□ 0.39
SPG21-213ENST00000561078 MGAMO43451 1857 aa17.46■□□□□ 0.39
SPG21-213ENST00000561078 EEF2P13639 858 aaKnown RBP17.46■□□□□ 0.39
SPG21-213ENST00000561078 DDIT3P35638 169 aa17.46■□□□□ 0.39
SPG21-213ENST00000561078 PDE4BQ07343 736 aa17.46■□□□□ 0.39
SPG21-213ENST00000561078 POTEEQ6S8J3 1075 aa17.46■□□□□ 0.39
SPG21-213ENST00000561078 CHST3Q7LGC8 479 aa17.46■□□□□ 0.39
SPG21-213ENST00000561078 CCAR1Q8IX12 1150 aaKnown RBP17.46■□□□□ 0.39
SPG21-213ENST00000561078 MB21D1Q8N884 522 aa17.46■□□□□ 0.39
SPG21-213ENST00000561078 SOCS4Q8WXH5 440 aa17.46■□□□□ 0.39
SPG21-213ENST00000561078 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.46■□□□□ 0.39
SPG21-213ENST00000561078 NYAP2Q9P242 653 aa17.46■□□□□ 0.39
SPG21-213ENST00000561078 BIN2Q9UBW5 565 aaPredicted RBP17.46■□□□□ 0.39
SPG21-213ENST00000561078 ANAPC4Q9UJX5 808 aa17.46■□□□□ 0.39
SPG21-213ENST00000561078 SYNPO2Q9UMS6 1093 aa17.46■□□□□ 0.39
SPG21-213ENST00000561078 NEDD4P46934 1319 aa17.45■□□□□ 0.38
SPG21-213ENST00000561078 SPDYE16A6NNV3 312 aaPredicted RBP17.45■□□□□ 0.38
SPG21-213ENST00000561078 B4E1Z4 1266 aa17.45■□□□□ 0.38
SPG21-213ENST00000561078 WDR46O15213 610 aaKnown RBP17.45■□□□□ 0.38
SPG21-213ENST00000561078 LARGE1O95461 756 aa17.45■□□□□ 0.38
SPG21-213ENST00000561078 XRCC5P13010 732 aaKnown RBP17.45■□□□□ 0.38
SPG21-213ENST00000561078 ME3Q16798 604 aa17.45■□□□□ 0.38
SPG21-213ENST00000561078 RRP12Q5JTH9 1297 aaKnown RBP17.45■□□□□ 0.38
SPG21-213ENST00000561078 CCDC83Q8IWF9 413 aa17.45■□□□□ 0.38
SPG21-213ENST00000561078 NUDT12Q9BQG2 462 aa17.45■□□□□ 0.38
SPG21-213ENST00000561078 GOPCQ9HD26 462 aa17.45■□□□□ 0.38
SPG21-213ENST00000561078 NAP1L2Q9ULW6 460 aaPredicted RBP17.45■□□□□ 0.38
SPG21-213ENST00000561078 RBBP6Q7Z6E9 1792 aaKnown RBP17.45■□□□□ 0.38
SPG21-213ENST00000561078 HTTP42858 3142 aa17.44■□□□□ 0.38
SPG21-213ENST00000561078 CNMDO75829 334 aa17.44■□□□□ 0.38
SPG21-213ENST00000561078 GJB1P08034 283 aa17.44■□□□□ 0.38
SPG21-213ENST00000561078 PCP11498 1178 aaKnown RBP17.44■□□□□ 0.38
SPG21-213ENST00000561078 EN2P19622 333 aaPredicted RBP17.44■□□□□ 0.38
SPG21-213ENST00000561078 NUCB2P80303 420 aa17.44■□□□□ 0.38
SPG21-213ENST00000561078 TRMT44Q8IYL2 757 aaKnown RBP17.44■□□□□ 0.38
SPG21-213ENST00000561078 STK11IPQ8N1F8 1099 aa17.44■□□□□ 0.38
SPG21-213ENST00000561078 PAGR1Q9BTK6 254 aa17.44■□□□□ 0.38
SPG21-213ENST00000561078 SMC3Q9UQE7 1217 aa17.44■□□□□ 0.38
SPG21-213ENST00000561078 IGKV6D-41A0A0C4DH26 115 aa17.43■□□□□ 0.38
SPG21-213ENST00000561078 STK3Q13188 491 aa17.43■□□□□ 0.38
SPG21-213ENST00000561078 MTFR1Q15390 333 aa17.43■□□□□ 0.38
SPG21-213ENST00000561078 PLEKHH3Q7Z736 793 aa17.43■□□□□ 0.38
SPG21-213ENST00000561078 FBXL16Q8N461 479 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms