RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 ARPP21Q9UBL0 812 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 CHMP2AO43633 222 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 SASH1O94885 1247 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 TRIP13Q15645 432 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 PACS2Q86VP3 889 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 VSTM4Q8IW00 320 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 TRMT44Q8IYL2 757 aaKnown RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 GALNT4Q8N4A0 578 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 ARL1P40616 181 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 PDE4DQ08499 809 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 WDR60Q8WVS4 1066 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 GPR101Q96P66 508 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 B2RBV5 119 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 EVI5O60447 810 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 CCDC144BQ3MJ40 725 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 TOGARAM2Q6ZUX3 1019 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 TTC1Q99614 292 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 OSBPL5Q9H0X9 879 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-248ENST00000558190 DNM2P50570 870 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 CEP85Q6P2H3 762 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 SLC17A8Q8NDX2 589 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 ENOX1Q8TC92 643 aaKnown RBP4.05□□□□□ -1.76
ATXN3-248ENST00000558190 PANK4Q9NVE7 773 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 ARHGAP4P98171 946 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 ANLNQ9NQW6 1124 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 OLFML3Q9NRN5 406 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 ZNF189O75820 626 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-248ENST00000558190 ATP1A3P13637 1013 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 TCP1P17987 556 aaKnown RBP4.05□□□□□ -1.76
ATXN3-248ENST00000558190 COPB1P53618 953 aaKnown RBP4.05□□□□□ -1.76
ATXN3-248ENST00000558190 ITGADQ13349 1161 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 RAPGEF1Q13905 1077 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 HMGB1P1B2RPK0 211 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-248ENST00000558190 CYFIP2Q96F07 1278 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 WAPLQ7Z5K2 1190 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 ZNF274Q96GC6 653 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-248ENST00000558190 MOCS3O95396 460 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 LMNAP02545 664 aaKnown RBP4.05□□□□□ -1.76
ATXN3-248ENST00000558190 ANKIB1Q9P2G1 1089 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 NINLQ9Y2I6 1382 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 ZBBXA8MT70 800 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 OCA2Q04671 838 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 TTC6Q86TZ1 520 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 KIFAP3Q92845 792 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 CTNND2Q9UQB3 1225 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 EIF3AQ14152 1382 aaKnown RBP4.05□□□□□ -1.76
ATXN3-248ENST00000558190 H0Y3Z8 333 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 FLOT1O75955 427 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 PHEXP78562 749 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 BFSP1Q12934 665 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 TRMT2AQ8IZ69 625 aaKnown RBP4.05□□□□□ -1.76
ATXN3-248ENST00000558190 FERMT1Q9BQL6 677 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 IL16Q14005 1332 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 LAMB3Q13751 1172 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 DRC3Q9H069 523 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 ANXA1P04083 346 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 LDHAL6AQ6ZMR3 332 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 MICU3Q86XE3 530 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 SCYL1Q96KG9 808 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 RAB17Q9H0T7 212 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 DNAJC9Q8WXX5 260 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 H0Y626 953 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 SART1O43290 800 aaKnown RBP4.05□□□□□ -1.76
ATXN3-248ENST00000558190 TAF5LO75529 589 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 TRIM16O95361 564 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 C8orf74Q6P047 294 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 KIF2BQ8N4N8 673 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 MAP3K21Q5TCX8 1036 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 NOD2Q9HC29 1040 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 NUB1Q9Y5A7 615 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 ZNF530Q6P9A1 599 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-248ENST00000558190 RDH13Q8NBN7 331 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 DTX3LQ8TDB6 740 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 CCDC151A5D8V7 595 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 CAVIN4Q5BKX8 364 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 CCDC89Q8N998 374 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 HELBQ8NG08 1087 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-248ENST00000558190 PRAM1Q96QH2 718 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 DBF4Q9UBU7 674 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-248ENST00000558190 PAPOLAP51003 745 aaKnown RBP4.05□□□□□ -1.76
ATXN3-248ENST00000558190 SCRN1Q12765 414 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 DHTKD1Q96HY7 919 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-248ENST00000558190 LOC100653049A0A140TA62 436 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 MCF2LO15068 1137 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 KRT34O76011 436 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 CLEC17AQ6ZS10 378 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 PDCLQ13371 301 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 DPH6Q7L8W6 267 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 TPH2Q8IWU9 490 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 KIF2CQ99661 725 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 MRPL46Q9H2W6 279 aaKnown RBP4.05□□□□□ -1.76
ATXN3-248ENST00000558190 ETNK1Q9HBU6 452 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-248ENST00000558190 BZW2Q9Y6E2 419 aaKnown RBP4.05□□□□□ -1.76
ATXN3-248ENST00000558190 AHCYL1O43865 530 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 THEMIS2Q5TEJ8 643 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 DCLK2Q8N568 766 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 ERMNQ8TAM6 284 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 ZFATQ9P243 1243 aa4.05□□□□□ -1.76
ATXN3-248ENST00000558190 PPARGC1AQ9UBK2 798 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms