RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 HAUS7Q99871 368 aa2.6□□□□□ -1.99
HIF1A-212ENST00000557538 DUSP15Q9H1R2 295 aaPredicted RBP2.6□□□□□ -1.99
HIF1A-212ENST00000557538 ZSWIM4Q9H7M6 989 aa2.6□□□□□ -1.99
HIF1A-212ENST00000557538 GP6Q9HCN6 339 aa2.6□□□□□ -1.99
HIF1A-212ENST00000557538 SF3B6Q9Y3B4 125 aaKnown RBP2.6□□□□□ -1.99
HIF1A-212ENST00000557538 ZNF451Q9Y4E5 1061 aa2.6□□□□□ -1.99
HIF1A-212ENST00000557538 MRVI1Q9Y6F6 885 aa2.6□□□□□ -1.99
HIF1A-212ENST00000557538 ZNF205O95201 554 aa2.59□□□□□ -1.99
HIF1A-212ENST00000557538 GSNP06396 782 aa2.59□□□□□ -1.99
HIF1A-212ENST00000557538 ADMP35318 185 aa2.59□□□□□ -1.99
HIF1A-212ENST00000557538 IFRD2Q12894 506 aaPredicted RBP2.59□□□□□ -1.99
HIF1A-212ENST00000557538 HSP90AA2PQ14568 343 aaPredicted RBP2.59□□□□□ -1.99
HIF1A-212ENST00000557538 AXDND1Q5T1B0 1012 aaPredicted RBP2.59□□□□□ -1.99
HIF1A-212ENST00000557538 SFRP5Q5T4F7 317 aa2.59□□□□□ -1.99
HIF1A-212ENST00000557538 C6orf15Q6UXA7 325 aaPredicted RBP2.59□□□□□ -1.99
HIF1A-212ENST00000557538 RNF111Q6ZNA4 994 aa2.59□□□□□ -1.99
HIF1A-212ENST00000557538 HOMER1Q86YM7 354 aa2.59□□□□□ -1.99
HIF1A-212ENST00000557538 SCUBE1Q8IWY4 988 aa2.59□□□□□ -1.99
HIF1A-212ENST00000557538 NLGN2Q8NFZ4 835 aa2.59□□□□□ -1.99
HIF1A-212ENST00000557538 ZFYVE21Q9BQ24 234 aa2.59□□□□□ -1.99
HIF1A-212ENST00000557538 PRDM5Q9NQX1 630 aaPredicted RBP2.59□□□□□ -1.99
HIF1A-212ENST00000557538 CYP26B1Q9NR63 512 aa2.59□□□□□ -1.99
HIF1A-212ENST00000557538 KIAA1324LA8MWY0 1029 aaPredicted RBP2.59□□□□□ -1.99
HIF1A-212ENST00000557538 C9IYK1 514 aa2.59□□□□□ -1.99
HIF1A-212ENST00000557538 DYNC1LI2O43237 492 aaPredicted RBP2.59□□□□□ -1.99
HIF1A-212ENST00000557538 VIL1P09327 827 aaKnown RBP2.59□□□□□ -1.99
HIF1A-212ENST00000557538 IFI16Q16666 785 aaKnown RBP2.59□□□□□ -1.99
HIF1A-212ENST00000557538 INTS5Q6P9B9 1019 aaKnown RBP2.59□□□□□ -1.99
HIF1A-212ENST00000557538 PHACTR4Q8IZ21 702 aa2.59□□□□□ -1.99
HIF1A-212ENST00000557538 TOP6BLQ8N6T0 577 aa2.59□□□□□ -1.99
HIF1A-212ENST00000557538 BVESQ8NE79 360 aa2.59□□□□□ -1.99
HIF1A-212ENST00000557538 HDAC8Q9BY41 377 aa2.59□□□□□ -1.99
HIF1A-212ENST00000557538 PICK1Q9NRD5 415 aa2.59□□□□□ -1.99
HIF1A-212ENST00000557538 SEMA3GQ9NS98 782 aa2.59□□□□□ -1.99
HIF1A-212ENST00000557538 RNF112Q9ULX5 631 aa2.59□□□□□ -1.99
HIF1A-212ENST00000557538 CNTNAP4Q9C0A0 1308 aa2.59□□□□□ -2
HIF1A-212ENST00000557538 DYRK3O43781 588 aa2.59□□□□□ -2
HIF1A-212ENST00000557538 NPTXRO95502 500 aa2.59□□□□□ -2
HIF1A-212ENST00000557538 BMP8BP34820 402 aa2.59□□□□□ -2
HIF1A-212ENST00000557538 KIAA1211LQ6NV74 962 aa2.59□□□□□ -2
HIF1A-212ENST00000557538 ANKLE2Q86XL3 938 aa2.59□□□□□ -2
HIF1A-212ENST00000557538 GSTCDQ8NEC7 633 aa2.59□□□□□ -2
HIF1A-212ENST00000557538 PMFBP1Q8TBY8 1022 aa2.59□□□□□ -2
HIF1A-212ENST00000557538 SRPK1Q96SB4 655 aaKnown RBP2.59□□□□□ -2
HIF1A-212ENST00000557538 DNAJC7Q99615 494 aa2.59□□□□□ -2
HIF1A-212ENST00000557538 SPOCK3Q9BQ16 436 aa2.59□□□□□ -2
HIF1A-212ENST00000557538 TRIT1Q9H3H1 467 aaKnown RBP2.59□□□□□ -2
HIF1A-212ENST00000557538 ARHGEF4Q9NR80 690 aa2.59□□□□□ -2
HIF1A-212ENST00000557538 INTS7Q9NVH2 962 aaKnown RBP2.59□□□□□ -2
HIF1A-212ENST00000557538 PCDHB12Q9Y5F1 795 aa2.59□□□□□ -2
HIF1A-212ENST00000557538 PLD2O14939 933 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 F13BP05160 661 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 FAM87AP0C7U9 286 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 ITGA4P13612 1032 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 SQSTM1Q13501 440 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 TCEAL1Q15170 157 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 GNPTABQ3T906 1256 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 DUSP27Q5VZP5 1158 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 E4F1Q66K89 784 aaPredicted RBP2.58□□□□□ -2
HIF1A-212ENST00000557538 C16orf86Q6ZW13 317 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 KRT26Q7Z3Y9 468 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 TSPYL5Q86VY4 417 aaPredicted RBP2.58□□□□□ -2
HIF1A-212ENST00000557538 LINC00116Q8NCU8 138 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 RIN3Q8TB24 985 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 APPBP2Q92624 585 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 TP53INP1Q96A56 240 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 MIPEPQ99797 713 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 PRDM14Q9GZV8 571 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 NKX2-4Q9H2Z4 354 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 ADGRE2Q9UHX3 823 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 PLAAQ9Y263 795 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 TRAV20A0A0B4J274 112 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 MSTNO14793 375 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 LEFTY1O75610 366 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 PPM1BO75688 479 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 RAB6AP20340 208 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 ZNF445P59923 1031 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 SLC35F1Q5T1Q4 408 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 HEATR6Q6AI08 1181 aaKnown RBP2.58□□□□□ -2
HIF1A-212ENST00000557538 POMZP3Q6PJE2 187 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 Q8N1Y9 231 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 SH3TC2Q8TF17 1288 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 COPS5Q92905 334 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 C1orf159Q96HA4 380 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 MMP19Q99542 508 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 AARSD1Q9BTE6 412 aaKnown RBP2.58□□□□□ -2
HIF1A-212ENST00000557538 SSU72Q9NP77 194 aaKnown RBP2.58□□□□□ -2
HIF1A-212ENST00000557538 KLHL3Q9UH77 587 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 PLAGL2Q9UPG8 496 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 TMEM265A0A087WTH1 108 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 WNT9AO14904 365 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 CPP00450 1065 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 SUMO1P63165 101 aaKnown RBP2.58□□□□□ -2
HIF1A-212ENST00000557538 PRKCQQ04759 706 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 CYP4F3Q08477 520 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 IQCEQ6IPM2 695 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 ZNF227Q86WZ6 799 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 DTX1Q86Y01 620 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 STK11IPQ8N1F8 1099 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 OSBP2Q969R2 916 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms