RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 MED23Q9ULK4 1368 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 TESPA1A2RU30 521 aaPredicted RBP9.25□□□□□ -0.93
CHD8-213ENST00000557364 PTGS1P23219 599 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 CACTINQ8WUQ7 758 aaKnown RBP9.25□□□□□ -0.93
CHD8-213ENST00000557364 TIGD1Q96MW7 591 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 DBNDD2Q9BQY9 259 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 RRP9O43818 475 aaKnown RBP9.25□□□□□ -0.93
CHD8-213ENST00000557364 KRT19P08727 400 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 SMCO2A6NFE2 343 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 CAPN9O14815 690 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 TLR3O15455 904 aaKnown RBP9.24□□□□□ -0.93
CHD8-213ENST00000557364 CD19P15391 556 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 FBLN1P23142 703 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 UBE3CQ15386 1083 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 HADHQ16836 314 aaKnown RBP9.24□□□□□ -0.93
CHD8-213ENST00000557364 FYB2Q5VWT5 728 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 TTLL6Q8N841 843 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 SLC12A6Q9UHW9 1150 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 PZPP20742 1482 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 PTPRTO14522 1441 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 XRCC5P13010 732 aaKnown RBP9.24□□□□□ -0.93
CHD8-213ENST00000557364 SURF1Q15526 300 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 DIS3L2Q8IYB7 885 aaKnown RBP9.24□□□□□ -0.93
CHD8-213ENST00000557364 TTC1Q99614 292 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 C1orf112Q9NSG2 853 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 TAF5LO75529 589 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 POLGP54098 1239 aaPredicted RBP9.24□□□□□ -0.93
CHD8-213ENST00000557364 GIMAP6Q6P9H5 292 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 ZNF274Q96GC6 653 aaPredicted RBP9.24□□□□□ -0.93
CHD8-213ENST00000557364 LARP6Q9BRS8 491 aaKnown RBP9.24□□□□□ -0.93
CHD8-213ENST00000557364 WWC3Q9ULE0 1092 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 ABT1Q9ULW3 272 aaKnown RBP9.24□□□□□ -0.93
CHD8-213ENST00000557364 TTC37Q6PGP7 1564 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 NOL3O60936 208 aaKnown RBP9.24□□□□□ -0.93
CHD8-213ENST00000557364 TTLL1O95922 423 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 CRKLP46109 303 aaKnown RBP9.24□□□□□ -0.93
CHD8-213ENST00000557364 FAM160B2Q86V87 743 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 BCAP29Q9UHQ4 241 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 ALAS1P13196 640 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 ZSCAN20P17040 1043 aaPredicted RBP9.24□□□□□ -0.93
CHD8-213ENST00000557364 MED10Q9BTT4 135 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 WDR11Q9BZH6 1224 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 GDPD2Q9HCC8 539 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 OVOS2A0A0G2JMS6 1433 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 OVOS2A0A0J9YW53 1432 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 OVOS2Q6IE36 1432 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 IGSF3O75054 1194 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 MIS18BP1Q6P0N0 1132 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 P3H4Q92791 437 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 IMPACTQ9P2X3 320 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 USH1CQ9Y6N9 552 aa9.24□□□□□ -0.93
CHD8-213ENST00000557364 TRIM50Q86XT4 487 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 PCDHA12Q9UN75 941 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 THAP12O43422 761 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 PRKG1Q13976 671 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 CCDC122Q5T0U0 273 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 TMTC1Q8IUR5 882 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 CCDC89Q8N998 374 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 EXOC4Q96A65 974 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 TARBP1Q13395 1621 aaKnown RBP9.23□□□□□ -0.93
CHD8-213ENST00000557364 TRAPPC10P48553 1259 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 SAMD15Q9P1V8 674 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 PIM2Q9P1W9 311 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 FBXO40Q9UH90 709 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 PCDHB15Q9Y5E8 787 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 IQCA1LA6NCM1 817 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 SGSM2O43147 1006 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 CCND2P30279 289 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 GBP1P32455 592 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 TRIM11Q96F44 468 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 CTNND2Q9UQB3 1225 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 SAMD9LQ8IVG5 1584 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 SERPINB2P05120 415 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 CABP7Q86V35 215 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 ZBTB7BO15156 539 aaPredicted RBP9.23□□□□□ -0.93
CHD8-213ENST00000557364 TPH2Q8IWU9 490 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 GRK7Q8WTQ7 553 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 SLC7A3Q8WY07 619 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 CCDC51Q96ER9 411 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 PLCB1Q9NQ66 1216 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 BTDP43251 543 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 TPD52P55327 224 aaPredicted RBP9.23□□□□□ -0.93
CHD8-213ENST00000557364 ALCAMQ13740 583 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 CHST3Q7LGC8 479 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 TCEANC2Q96MN5 208 aa9.23□□□□□ -0.93
CHD8-213ENST00000557364 BAG1Q99933 345 aaPredicted RBP9.23□□□□□ -0.93
CHD8-213ENST00000557364 USP17L3A6NCW0 530 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 USP17L4A6NCW7 530 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 IGHDP01880 384 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 TMEM191BP0C7N4 346 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 GAP43P17677 238 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 SLFN13Q68D06 897 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 USP17L1Q7RTZ2 530 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 NEK8Q86SG6 692 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 APOBEC3FQ8IUX4 373 aaKnown RBP9.22□□□□□ -0.93
CHD8-213ENST00000557364 ZNF654Q8IZM8 581 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 BLIDQ8IZY5 108 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 MASTLQ96GX5 879 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 AK8Q96MA6 479 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 KIAA0825Q8IV33 1275 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms