RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 TSEN2Q8NCE0 465 aaKnown RBP12.01□□□□□ -0.49
HNRNPC-228ENST00000557033 ZKSCAN4Q969J2 545 aaPredicted RBP12.01□□□□□ -0.49
HNRNPC-228ENST00000557033 ZNF512BQ96KM6 892 aaPredicted RBP12.01□□□□□ -0.49
HNRNPC-228ENST00000557033 WRNIP1Q96S55 665 aa12.01□□□□□ -0.49
HNRNPC-228ENST00000557033 PTPN18Q99952 460 aa12.01□□□□□ -0.49
HNRNPC-228ENST00000557033 CHMP4BQ9H444 224 aaKnown RBP12.01□□□□□ -0.49
HNRNPC-228ENST00000557033 SNCAIPQ9Y6H5 919 aa12.01□□□□□ -0.49
HNRNPC-228ENST00000557033 OTOFQ9HC10 1997 aa12□□□□□ -0.49
HNRNPC-228ENST00000557033 SCAMP3O14828 347 aaKnown RBP12□□□□□ -0.49
HNRNPC-228ENST00000557033 P4HBP07237 508 aaKnown RBP12□□□□□ -0.49
HNRNPC-228ENST00000557033 PPATQ06203 517 aa12□□□□□ -0.49
HNRNPC-228ENST00000557033 CEP85Q6P2H3 762 aa12□□□□□ -0.49
HNRNPC-228ENST00000557033 HELQQ8TDG4 1101 aa12□□□□□ -0.49
HNRNPC-228ENST00000557033 PANK1Q8TE04 598 aa12□□□□□ -0.49
HNRNPC-228ENST00000557033 NSUN4Q96CB9 384 aaKnown RBP12□□□□□ -0.49
HNRNPC-228ENST00000557033 OTUD5Q96G74 571 aa12□□□□□ -0.49
HNRNPC-228ENST00000557033 SPATA32Q96LK8 384 aa12□□□□□ -0.49
HNRNPC-228ENST00000557033 RBCK1Q9BYM8 510 aa12□□□□□ -0.49
HNRNPC-228ENST00000557033 R3HDMLQ9H3Y0 253 aa12□□□□□ -0.49
HNRNPC-228ENST00000557033 ZCCHC17Q9NP64 241 aaKnown RBP12□□□□□ -0.49
HNRNPC-228ENST00000557033 MROH7-TTC4A0A0A0MT08 1334 aa12□□□□□ -0.49
HNRNPC-228ENST00000557033 CCL15-CCL14A0A0B4J2E2 113 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 MAGEB6P1A0A0J9YX57 407 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 SMARCA5O60264 1052 aaPredicted RBP11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 WDHD1O75717 1129 aaPredicted RBP11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 CETPP11597 493 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 MCAMP43121 646 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 BTDP43251 543 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 RGS3P49796 1198 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 MAP3K10Q02779 954 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 PPIL2Q13356 520 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 CCL15Q16663 113 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 HSP90AB4PQ58FF6 505 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 TTC39AQ5SRH9 613 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 TMC7Q7Z402 723 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 ERC1Q8IUD2 1116 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 ZFPM1Q8IX07 1006 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 RPAP2Q8IXW5 612 aaPredicted RBP11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 PRDM9Q9NQV7 894 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 RAI14Q9P0K7 980 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 LRP2BPQ9P2M1 347 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 RCAN3Q9UKA8 241 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 DDX19BQ9UMR2 479 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 HPS5Q9UPZ3 1129 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 AK9Q5TCS8 1911 aa11.99□□□□□ -0.49
HNRNPC-228ENST00000557033 FAM13AO94988 1023 aa11.98□□□□□ -0.49
HNRNPC-228ENST00000557033 INPP5BP32019 993 aa11.98□□□□□ -0.49
HNRNPC-228ENST00000557033 CRHR2Q13324 411 aa11.98□□□□□ -0.49
HNRNPC-228ENST00000557033 SNAPC2Q13487 334 aa11.98□□□□□ -0.49
HNRNPC-228ENST00000557033 NAA30Q147X3 362 aaPredicted RBP11.98□□□□□ -0.49
HNRNPC-228ENST00000557033 NOL9Q5SY16 702 aaKnown RBP11.98□□□□□ -0.49
HNRNPC-228ENST00000557033 PI16Q6UXB8 463 aa11.98□□□□□ -0.49
HNRNPC-228ENST00000557033 ZNF384Q8TF68 577 aa11.98□□□□□ -0.49
HNRNPC-228ENST00000557033 BRI3BPQ8WY22 251 aa11.98□□□□□ -0.49
HNRNPC-228ENST00000557033 ERO1AQ96HE7 468 aa11.98□□□□□ -0.49
HNRNPC-228ENST00000557033 DBNDD2Q9BQY9 259 aa11.98□□□□□ -0.49
HNRNPC-228ENST00000557033 ZFYVE28Q9HCC9 887 aa11.98□□□□□ -0.49
HNRNPC-228ENST00000557033 RFX7Q2KHR2 1363 aa11.97□□□□□ -0.49
HNRNPC-228ENST00000557033 SOWAHBA6NEL2 793 aa11.97□□□□□ -0.49
HNRNPC-228ENST00000557033 ESPNB1AK53 854 aa11.97□□□□□ -0.49
HNRNPC-228ENST00000557033 BAG3O95817 575 aa11.97□□□□□ -0.49
HNRNPC-228ENST00000557033 RHBDL3P58872 404 aa11.97□□□□□ -0.49
HNRNPC-228ENST00000557033 SP3Q02447 781 aa11.97□□□□□ -0.49
HNRNPC-228ENST00000557033 FBXO46Q6PJ61 603 aaPredicted RBP11.97□□□□□ -0.49
HNRNPC-228ENST00000557033 SP7Q8TDD2 431 aaPredicted RBP11.97□□□□□ -0.49
HNRNPC-228ENST00000557033 EAF2Q96CJ1 260 aaPredicted RBP11.97□□□□□ -0.49
HNRNPC-228ENST00000557033 NOL10Q9BSC4 688 aaKnown RBP11.97□□□□□ -0.49
HNRNPC-228ENST00000557033 ZBTB40Q9NUA8 1239 aa11.97□□□□□ -0.49
HNRNPC-228ENST00000557033 TSR3Q9UJK0 312 aaKnown RBP11.97□□□□□ -0.49
HNRNPC-228ENST00000557033 PCDHB11Q9Y5F2 797 aa11.97□□□□□ -0.49
HNRNPC-228ENST00000557033 PHF20L1A8MW92 1017 aa11.96□□□□□ -0.49
HNRNPC-228ENST00000557033 CXCL11O14625 94 aa11.96□□□□□ -0.49
HNRNPC-228ENST00000557033 CYP2E1P05181 493 aaPredicted RBP11.96□□□□□ -0.49
HNRNPC-228ENST00000557033 PDE3AQ14432 1141 aa11.96□□□□□ -0.49
HNRNPC-228ENST00000557033 ARHGEF6Q15052 776 aa11.96□□□□□ -0.49
HNRNPC-228ENST00000557033 NAA16Q6N069 864 aaPredicted RBP11.96□□□□□ -0.49
HNRNPC-228ENST00000557033 TMED8Q6PL24 325 aaPredicted RBP11.96□□□□□ -0.49
HNRNPC-228ENST00000557033 ZNF687Q8N1G0 1237 aa11.96□□□□□ -0.49
HNRNPC-228ENST00000557033 FAM43AQ8N2R8 423 aa11.96□□□□□ -0.49
HNRNPC-228ENST00000557033 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.96□□□□□ -0.49
HNRNPC-228ENST00000557033 CCDC8Q9H0W5 538 aaPredicted RBP11.96□□□□□ -0.49
HNRNPC-228ENST00000557033 DDX4Q9NQI0 724 aaKnown RBP11.96□□□□□ -0.49
HNRNPC-228ENST00000557033 DBNLQ9UJU6 430 aaKnown RBP11.96□□□□□ -0.49
HNRNPC-228ENST00000557033 KCNH4Q9UQ05 1017 aa11.96□□□□□ -0.49
HNRNPC-228ENST00000557033 ATRNL1Q5VV63 1379 aa11.95□□□□□ -0.5
HNRNPC-228ENST00000557033 DDTLA6NHG4 134 aaPredicted RBP11.95□□□□□ -0.5
HNRNPC-228ENST00000557033 CTNND1O60716 968 aaKnown RBP11.95□□□□□ -0.5
HNRNPC-228ENST00000557033 HMMRO75330 724 aa11.95□□□□□ -0.5
HNRNPC-228ENST00000557033 IGFBP4P22692 258 aa11.95□□□□□ -0.5
HNRNPC-228ENST00000557033 MLLT1Q03111 559 aaPredicted RBP11.95□□□□□ -0.5
HNRNPC-228ENST00000557033 PICALMQ13492 652 aa11.95□□□□□ -0.5
HNRNPC-228ENST00000557033 TAF1CQ15572 869 aaPredicted RBP11.95□□□□□ -0.5
HNRNPC-228ENST00000557033 BPHLQ86WA6 291 aaPredicted RBP11.95□□□□□ -0.5
HNRNPC-228ENST00000557033 SCYL3Q8IZE3 742 aa11.95□□□□□ -0.5
HNRNPC-228ENST00000557033 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.95□□□□□ -0.5
HNRNPC-228ENST00000557033 ANKK1Q8NFD2 765 aa11.95□□□□□ -0.5
HNRNPC-228ENST00000557033 EXOC6BQ9Y2D4 811 aa11.95□□□□□ -0.5
HNRNPC-228ENST00000557033 BTBD19C9JJ37 291 aa11.94□□□□□ -0.5
HNRNPC-228ENST00000557033 TREHO43280 583 aa11.94□□□□□ -0.5
HNRNPC-228ENST00000557033 TLR2O60603 784 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms