RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 RPS6KB1P23443 525 aa16.58■□□□□ 0.24
SNX6-206ENST00000556162 LIFRP42702 1097 aa16.58■□□□□ 0.24
SNX6-206ENST00000556162 CRHR2Q13324 411 aa16.58■□□□□ 0.24
SNX6-206ENST00000556162 RUFY3Q7L099 469 aa16.58■□□□□ 0.24
SNX6-206ENST00000556162 SMCR8Q8TEV9 937 aaPredicted RBP16.58■□□□□ 0.24
SNX6-206ENST00000556162 DCAF4Q8WV16 495 aa16.58■□□□□ 0.24
SNX6-206ENST00000556162 CHMP4CQ96CF2 233 aa16.58■□□□□ 0.24
SNX6-206ENST00000556162 TCEANC2Q96MN5 208 aa16.58■□□□□ 0.24
SNX6-206ENST00000556162 NUP88Q99567 741 aaPredicted RBP16.58■□□□□ 0.24
SNX6-206ENST00000556162 LY9Q9HBG7 655 aa16.58■□□□□ 0.24
SNX6-206ENST00000556162 TBC1D8O95759 1140 aa16.57■□□□□ 0.24
SNX6-206ENST00000556162 COG2Q14746 738 aa16.57■□□□□ 0.24
SNX6-206ENST00000556162 NFXL1Q6ZNB6 911 aa16.57■□□□□ 0.24
SNX6-206ENST00000556162 P2RX7Q99572 595 aaKnown RBP16.57■□□□□ 0.24
SNX6-206ENST00000556162 CFHR5Q9BXR6 569 aa16.57■□□□□ 0.24
SNX6-206ENST00000556162 GPHNQ9NQX3 736 aaPredicted RBP16.57■□□□□ 0.24
SNX6-206ENST00000556162 HOXC10Q9NYD6 342 aa16.57■□□□□ 0.24
SNX6-206ENST00000556162 LOC285556D6RIA3 1793 aa16.57■□□□□ 0.24
SNX6-206ENST00000556162 CCDC69A6NI79 296 aa16.56■□□□□ 0.24
SNX6-206ENST00000556162 FLOT1O75955 427 aa16.56■□□□□ 0.24
SNX6-206ENST00000556162 CATIPQ7Z7H3 387 aa16.56■□□□□ 0.24
SNX6-206ENST00000556162 SENP2Q9HC62 589 aa16.56■□□□□ 0.24
SNX6-206ENST00000556162 TLR2O60603 784 aa16.56■□□□□ 0.24
SNX6-206ENST00000556162 PDHBP11177 359 aa16.56■□□□□ 0.24
SNX6-206ENST00000556162 CCDC96Q2M329 555 aa16.56■□□□□ 0.24
SNX6-206ENST00000556162 IL17RAQ96F46 866 aa16.56■□□□□ 0.24
SNX6-206ENST00000556162 UPF3BQ9BZI7 483 aaKnown RBP16.56■□□□□ 0.24
SNX6-206ENST00000556162 FEM1BQ9UK73 627 aa16.56■□□□□ 0.24
SNX6-206ENST00000556162 TMEM232C9JQI7 657 aa16.55■□□□□ 0.24
SNX6-206ENST00000556162 RBM25P49756 843 aaKnown RBP16.55■□□□□ 0.24
SNX6-206ENST00000556162 HERVK_113P62684 666 aa16.55■□□□□ 0.24
SNX6-206ENST00000556162 SAMD1Q6SPF0 538 aaPredicted RBP16.55■□□□□ 0.24
SNX6-206ENST00000556162 Q6ZUG5 572 aa16.55■□□□□ 0.24
SNX6-206ENST00000556162 KCTD1Q719H9 257 aa16.55■□□□□ 0.24
SNX6-206ENST00000556162 CHURC1Q8WUH1 139 aa16.55■□□□□ 0.24
SNX6-206ENST00000556162 HSPA1AP0DMV8 641 aaKnown RBP16.54■□□□□ 0.24
SNX6-206ENST00000556162 HSPA1BP0DMV9 641 aaKnown RBP16.54■□□□□ 0.24
SNX6-206ENST00000556162 SNHG28P0DPA3 235 aa16.54■□□□□ 0.24
SNX6-206ENST00000556162 GCLCP48506 637 aaPredicted RBP16.54■□□□□ 0.24
SNX6-206ENST00000556162 IKQ13123 557 aaPredicted RBP16.54■□□□□ 0.24
SNX6-206ENST00000556162 SYNE3Q6ZMZ3 975 aa16.54■□□□□ 0.24
SNX6-206ENST00000556162 SGMS1Q86VZ5 419 aa16.54■□□□□ 0.24
SNX6-206ENST00000556162 GTF3C2Q8WUA4 911 aaPredicted RBP16.54■□□□□ 0.24
SNX6-206ENST00000556162 R3HDMLQ9H3Y0 253 aa16.54■□□□□ 0.24
SNX6-206ENST00000556162 FBXO28Q9NVF7 368 aa16.54■□□□□ 0.24
SNX6-206ENST00000556162 SLC12A7Q9Y666 1083 aa16.54■□□□□ 0.24
SNX6-206ENST00000556162 DSG3P32926 999 aa16.54■□□□□ 0.24
SNX6-206ENST00000556162 STAT2P52630 851 aa16.54■□□□□ 0.24
SNX6-206ENST00000556162 GPATCH4Q5T3I0 446 aaKnown RBP16.54■□□□□ 0.24
SNX6-206ENST00000556162 RASGRP2Q7LDG7 609 aa16.54■□□□□ 0.24
SNX6-206ENST00000556162 ZNF654Q8IZM8 581 aa16.54■□□□□ 0.24
SNX6-206ENST00000556162 FBXL16Q8N461 479 aa16.54■□□□□ 0.24
SNX6-206ENST00000556162 PRPF38AQ8NAV1 312 aaKnown RBP16.54■□□□□ 0.24
SNX6-206ENST00000556162 SLF1Q9BQI6 1058 aa16.54■□□□□ 0.24
SNX6-206ENST00000556162 GPCPD1Q9NPB8 672 aa16.54■□□□□ 0.24
SNX6-206ENST00000556162 PDRG1Q9NUG6 133 aa16.54■□□□□ 0.24
SNX6-206ENST00000556162 CPA4Q9UI42 421 aa16.54■□□□□ 0.24
SNX6-206ENST00000556162 TSKSQ9UJT2 592 aa16.54■□□□□ 0.24
SNX6-206ENST00000556162 MYPNQ86TC9 1320 aa16.54■□□□□ 0.24
SNX6-206ENST00000556162 PARP1P09874 1014 aaKnown RBP16.53■□□□□ 0.24
SNX6-206ENST00000556162 ZNF543Q08ER8 600 aa16.53■□□□□ 0.24
SNX6-206ENST00000556162 TROAPQ12815 778 aa16.53■□□□□ 0.24
SNX6-206ENST00000556162 FAM160B2Q86V87 743 aa16.53■□□□□ 0.24
SNX6-206ENST00000556162 NUP133Q8WUM0 1156 aa16.53■□□□□ 0.24
SNX6-206ENST00000556162 PPP1R9AQ9ULJ8 1098 aa16.53■□□□□ 0.24
SNX6-206ENST00000556162 FRMPD2Q68DX3 1309 aaPredicted RBP16.53■□□□□ 0.24
SNX6-206ENST00000556162 SPDYE16A6NNV3 312 aaPredicted RBP16.52■□□□□ 0.24
SNX6-206ENST00000556162 PLA2G6O60733 806 aa16.52■□□□□ 0.24
SNX6-206ENST00000556162 DDAH1O94760 285 aa16.52■□□□□ 0.24
SNX6-206ENST00000556162 CALM1P0DP23 149 aa16.52■□□□□ 0.24
SNX6-206ENST00000556162 CALM2P0DP24 149 aa16.52■□□□□ 0.24
SNX6-206ENST00000556162 CALM3P0DP25 149 aa16.52■□□□□ 0.24
SNX6-206ENST00000556162 ASPRV1Q53RT3 343 aa16.52■□□□□ 0.24
SNX6-206ENST00000556162 C17orf99Q6UX52 265 aa16.52■□□□□ 0.24
SNX6-206ENST00000556162 LBX2Q6XYB7 198 aa16.52■□□□□ 0.24
SNX6-206ENST00000556162 BRF1Q92994 677 aa16.52■□□□□ 0.24
SNX6-206ENST00000556162 KIFC2Q96AC6 838 aa16.52■□□□□ 0.24
SNX6-206ENST00000556162 GOLGA8HP0CJ92 632 aa16.52■□□□□ 0.23
SNX6-206ENST00000556162 ANKRD13CQ8N6S4 541 aa16.52■□□□□ 0.23
SNX6-206ENST00000556162 ATG4CQ96DT6 458 aa16.52■□□□□ 0.23
SNX6-206ENST00000556162 AGXT2Q9BYV1 514 aa16.52■□□□□ 0.23
SNX6-206ENST00000556162 ADGRA2Q96PE1 1338 aa16.52■□□□□ 0.23
SNX6-206ENST00000556162 GPR25O00155 361 aa16.51■□□□□ 0.23
SNX6-206ENST00000556162 FOXN1O15353 648 aa16.51■□□□□ 0.23
SNX6-206ENST00000556162 CTCFP49711 727 aaPredicted RBP16.51■□□□□ 0.23
SNX6-206ENST00000556162 NEK4P51957 841 aa16.51■□□□□ 0.23
SNX6-206ENST00000556162 NOM1Q5C9Z4 860 aaKnown RBP16.51■□□□□ 0.23
SNX6-206ENST00000556162 TTBK2Q6IQ55 1244 aa16.51■□□□□ 0.23
SNX6-206ENST00000556162 MB21D1Q8N884 522 aa16.51■□□□□ 0.23
SNX6-206ENST00000556162 CTCFLQ8NI51 663 aaPredicted RBP16.51■□□□□ 0.23
SNX6-206ENST00000556162 TBC1D32Q96NH3 1257 aa16.51■□□□□ 0.23
SNX6-206ENST00000556162 MAP3K14Q99558 947 aa16.51■□□□□ 0.23
SNX6-206ENST00000556162 PAGR1Q9BTK6 254 aa16.51■□□□□ 0.23
SNX6-206ENST00000556162 MYL10Q9BUA6 226 aa16.51■□□□□ 0.23
SNX6-206ENST00000556162 RBPJLQ9UBG7 517 aa16.51■□□□□ 0.23
SNX6-206ENST00000556162 NAP1L2Q9ULW6 460 aaPredicted RBP16.51■□□□□ 0.23
SNX6-206ENST00000556162 RABGAP1Q9Y3P9 1069 aa16.51■□□□□ 0.23
SNX6-206ENST00000556162 CTDP1Q9Y5B0 961 aaPredicted RBP16.51■□□□□ 0.23
SNX6-206ENST00000556162 KLF18A0A0U1RQI7 1052 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 BCRP11274 1271 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms