RNA–Protein interactions for RNA: ENST00000553932.5

LINC00639-201, long intergenic non-protein coding RNA 639, humanhuman

TSL 2 BASIC

Gene LINC00639, Length 4,496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-201ENST00000553932 RAB3IPQ96QF0 476 aaPredicted RBP16.49■□□□□ 0.23
LINC00639-201ENST00000553932 KRT23Q9C075 422 aa16.49■□□□□ 0.23
LINC00639-201ENST00000553932 DPH5Q9H2P9 285 aa16.49■□□□□ 0.23
LINC00639-201ENST00000553932 STARD3NLO95772 234 aa16.49■□□□□ 0.23
LINC00639-201ENST00000553932 SCP2P22307 547 aa16.49■□□□□ 0.23
LINC00639-201ENST00000553932 NBPF9Q3BBW0 867 aa16.49■□□□□ 0.23
LINC00639-201ENST00000553932 SH2D4BQ5SQS7 431 aa16.49■□□□□ 0.23
LINC00639-201ENST00000553932 NAIF1Q69YI7 327 aaPredicted RBP16.49■□□□□ 0.23
LINC00639-201ENST00000553932 PRPF38AQ8NAV1 312 aaKnown RBP16.49■□□□□ 0.23
LINC00639-201ENST00000553932 IQCGQ9H095 443 aaKnown RBP16.49■□□□□ 0.23
LINC00639-201ENST00000553932 HELLSQ9NRZ9 838 aa16.49■□□□□ 0.23
LINC00639-201ENST00000553932 IKBKGQ9Y6K9 419 aa16.49■□□□□ 0.23
LINC00639-201ENST00000553932 LMTK2Q8IWU2 1503 aa16.49■□□□□ 0.23
LINC00639-201ENST00000553932 PPP1R12AO14974 1030 aaPredicted RBP16.49■□□□□ 0.23
LINC00639-201ENST00000553932 EIF4A1P60842 406 aaKnown RBP16.49■□□□□ 0.23
LINC00639-201ENST00000553932 PSMD2Q13200 908 aa16.49■□□□□ 0.23
LINC00639-201ENST00000553932 SLC39A14Q15043 492 aa16.49■□□□□ 0.23
LINC00639-201ENST00000553932 LRRC31Q6UY01 552 aa16.49■□□□□ 0.23
LINC00639-201ENST00000553932 RAB3IL1Q8TBN0 382 aa16.49■□□□□ 0.23
LINC00639-201ENST00000553932 ZNF274Q96GC6 653 aaPredicted RBP16.49■□□□□ 0.23
LINC00639-201ENST00000553932 QRICH2Q9H0J4 1663 aa16.48■□□□□ 0.23
LINC00639-201ENST00000553932 MORC3Q14149 939 aa16.48■□□□□ 0.23
LINC00639-201ENST00000553932 NAP1L3Q99457 506 aaPredicted RBP16.48■□□□□ 0.23
LINC00639-201ENST00000553932 PLVAPQ9BX97 442 aa16.48■□□□□ 0.23
LINC00639-201ENST00000553932 NLRP1Q9C000 1473 aa16.48■□□□□ 0.23
LINC00639-201ENST00000553932 PRPHP41219 470 aa16.48■□□□□ 0.23
LINC00639-201ENST00000553932 KSR1Q8IVT5 923 aa16.48■□□□□ 0.23
LINC00639-201ENST00000553932 TRIML1Q8N9V2 468 aa16.48■□□□□ 0.23
LINC00639-201ENST00000553932 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.48■□□□□ 0.23
LINC00639-201ENST00000553932 PANX2Q96RD6 677 aa16.48■□□□□ 0.23
LINC00639-201ENST00000553932 NLRC4Q9NPP4 1024 aa16.48■□□□□ 0.23
LINC00639-201ENST00000553932 INTS9Q9NV88 658 aaKnown RBP16.48■□□□□ 0.23
LINC00639-201ENST00000553932 SEC63Q9UGP8 760 aaKnown RBP16.48■□□□□ 0.23
LINC00639-201ENST00000553932 KCNK3O14649 394 aa16.48■□□□□ 0.23
LINC00639-201ENST00000553932 GCFC2P16383 781 aaKnown RBP16.48■□□□□ 0.23
LINC00639-201ENST00000553932 ATP5DP30049 168 aa16.48■□□□□ 0.23
LINC00639-201ENST00000553932 ADD1P35611 737 aaKnown RBP16.48■□□□□ 0.23
LINC00639-201ENST00000553932 PDE4DQ08499 809 aa16.48■□□□□ 0.23
LINC00639-201ENST00000553932 ZNF790Q6PG37 636 aa16.48■□□□□ 0.23
LINC00639-201ENST00000553932 EAF2Q96CJ1 260 aaPredicted RBP16.48■□□□□ 0.23
LINC00639-201ENST00000553932 STX2P32856 288 aa16.47■□□□□ 0.23
LINC00639-201ENST00000553932 SMYD4Q8IYR2 804 aaPredicted RBP16.47■□□□□ 0.23
LINC00639-201ENST00000553932 PIK3R5Q8WYR1 880 aa16.47■□□□□ 0.23
LINC00639-201ENST00000553932 HOMER3Q9NSC5 361 aa16.47■□□□□ 0.23
LINC00639-201ENST00000553932 PRAMEF22A3QJZ6 481 aa16.47■□□□□ 0.23
LINC00639-201ENST00000553932 PDIA3P30101 505 aaKnown RBP16.47■□□□□ 0.23
LINC00639-201ENST00000553932 IRAK1P51617 712 aa16.47■□□□□ 0.23
LINC00639-201ENST00000553932 MTF1Q14872 753 aa16.47■□□□□ 0.23
LINC00639-201ENST00000553932 CCDC174Q6PII3 467 aa16.47■□□□□ 0.23
LINC00639-201ENST00000553932 LDHAL6AQ6ZMR3 332 aa16.47■□□□□ 0.23
LINC00639-201ENST00000553932 DTHD1Q6ZMT9 781 aa16.47■□□□□ 0.23
LINC00639-201ENST00000553932 GRAMD1CQ8IYS0 662 aa16.47■□□□□ 0.23
LINC00639-201ENST00000553932 PLCB1Q9NQ66 1216 aa16.47■□□□□ 0.23
LINC00639-201ENST00000553932 POLR3EQ9NVU0 708 aa16.47■□□□□ 0.23
LINC00639-201ENST00000553932 H3BQF6 201 aa16.47■□□□□ 0.23
LINC00639-201ENST00000553932 CIB2O75838 187 aa16.47■□□□□ 0.23
LINC00639-201ENST00000553932 COPB1P53618 953 aaKnown RBP16.47■□□□□ 0.23
LINC00639-201ENST00000553932 MRRFQ96E11 262 aaKnown RBP16.47■□□□□ 0.23
LINC00639-201ENST00000553932 OPHN1O60890 802 aa16.47■□□□□ 0.23
LINC00639-201ENST00000553932 CTNNA2P26232 953 aa16.47■□□□□ 0.23
LINC00639-201ENST00000553932 KBTBD3Q8NAB2 608 aa16.47■□□□□ 0.23
LINC00639-201ENST00000553932 ZNF496Q96IT1 587 aaPredicted RBP16.47■□□□□ 0.23
LINC00639-201ENST00000553932 CNNM2Q9H8M5 875 aa16.47■□□□□ 0.23
LINC00639-201ENST00000553932 NOVA2Q9UNW9 492 aaKnown RBP16.47■□□□□ 0.23
LINC00639-201ENST00000553932 RASSF2P50749 326 aa16.46■□□□□ 0.23
LINC00639-201ENST00000553932 PDE1CQ14123 709 aaPredicted RBP16.46■□□□□ 0.23
LINC00639-201ENST00000553932 EMBQ6PCB8 327 aa16.46■□□□□ 0.23
LINC00639-201ENST00000553932 LRRN4CLQ8ND94 238 aa16.46■□□□□ 0.23
LINC00639-201ENST00000553932 ADGRG1Q9Y653 693 aa16.46■□□□□ 0.23
LINC00639-201ENST00000553932 SETD1BQ9UPS6 1966 aaKnown RBP16.46■□□□□ 0.23
LINC00639-201ENST00000553932 RPAP1Q9BWH6 1393 aaPredicted RBP16.46■□□□□ 0.23
LINC00639-201ENST00000553932 SUN1O94901 812 aa16.46■□□□□ 0.23
LINC00639-201ENST00000553932 CROCCP2Q86T23 111 aa16.46■□□□□ 0.23
LINC00639-201ENST00000553932 ENOX1Q8TC92 643 aaKnown RBP16.46■□□□□ 0.23
LINC00639-201ENST00000553932 VCX3BQ9H321 246 aa16.46■□□□□ 0.23
LINC00639-201ENST00000553932 VCX3AQ9NNX9 186 aa16.46■□□□□ 0.23
LINC00639-201ENST00000553932 NFU1Q9UMS0 254 aa16.46■□□□□ 0.23
LINC00639-201ENST00000553932 ARHGEF10O15013 1369 aa16.46■□□□□ 0.23
LINC00639-201ENST00000553932 NDUFA10O95299 355 aa16.46■□□□□ 0.23
LINC00639-201ENST00000553932 CYP27A1Q02318 531 aa16.46■□□□□ 0.23
LINC00639-201ENST00000553932 ARMC9Q7Z3E5 817 aa16.46■□□□□ 0.23
LINC00639-201ENST00000553932 ABTB1Q969K4 478 aaPredicted RBP16.46■□□□□ 0.23
LINC00639-201ENST00000553932 VAT1LQ9HCJ6 419 aa16.46■□□□□ 0.23
LINC00639-201ENST00000553932 ZNF446Q9NWS9 450 aa16.46■□□□□ 0.23
LINC00639-201ENST00000553932 TAF5LO75529 589 aa16.45■□□□□ 0.22
LINC00639-201ENST00000553932 TNNI3KQ59H18 835 aa16.45■□□□□ 0.22
LINC00639-201ENST00000553932 IFIT1BQ5T764 474 aaKnown RBP16.45■□□□□ 0.22
LINC00639-201ENST00000553932 MKNK2Q9HBH9 465 aa16.45■□□□□ 0.22
LINC00639-201ENST00000553932 FPGT-TNNI3KV9GXZ4 949 aa16.45■□□□□ 0.22
LINC00639-201ENST00000553932 TRAF5O00463 557 aa16.45■□□□□ 0.22
LINC00639-201ENST00000553932 ERCC5P28715 1186 aaPredicted RBP16.45■□□□□ 0.22
LINC00639-201ENST00000553932 GUCY1A3Q02108 690 aa16.45■□□□□ 0.22
LINC00639-201ENST00000553932 SLMAPQ14BN4 828 aa16.45■□□□□ 0.22
LINC00639-201ENST00000553932 FOXR1Q6PIV2 292 aa16.45■□□□□ 0.22
LINC00639-201ENST00000553932 DPF2Q92785 391 aa16.45■□□□□ 0.22
LINC00639-201ENST00000553932 TRMT112Q9UI30 125 aaKnown RBP16.45■□□□□ 0.22
LINC00639-201ENST00000553932 IGSF1Q8N6C5 1336 aa16.45■□□□□ 0.22
LINC00639-201ENST00000553932 IL15P40933 162 aaPredicted RBP16.45■□□□□ 0.22
LINC00639-201ENST00000553932 KIRREL3Q8IZU9 778 aa16.45■□□□□ 0.22
LINC00639-201ENST00000553932 SCOCQ9UIL1 159 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms