RNA–Protein interactions for RNA: ENST00000553660.5

CNIH1-203, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2 BASIC

Gene CNIH1, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-203ENST00000553660 MIGA1Q8NAN2 632 aa12.85□□□□□ -0.35
CNIH1-203ENST00000553660 CRNKL1Q9BZJ0 848 aaKnown RBP12.85□□□□□ -0.35
CNIH1-203ENST00000553660 RWDD1Q9H446 243 aaPredicted RBP12.85□□□□□ -0.35
CNIH1-203ENST00000553660 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.85□□□□□ -0.35
CNIH1-203ENST00000553660 SALL3Q9BXA9 1300 aa12.85□□□□□ -0.35
CNIH1-203ENST00000553660 GDF9O60383 454 aa12.84□□□□□ -0.35
CNIH1-203ENST00000553660 TBC1D8O95759 1140 aa12.84□□□□□ -0.35
CNIH1-203ENST00000553660 ZFYP08048 801 aaPredicted RBP12.84□□□□□ -0.35
CNIH1-203ENST00000553660 TRIM67Q6ZTA4 783 aa12.84□□□□□ -0.35
CNIH1-203ENST00000553660 FASTKD5Q7L8L6 764 aaKnown RBP12.84□□□□□ -0.35
CNIH1-203ENST00000553660 ANKRD23Q86SG2 305 aa12.84□□□□□ -0.35
CNIH1-203ENST00000553660 TTC6Q86TZ1 520 aa12.84□□□□□ -0.35
CNIH1-203ENST00000553660 ZNF296Q8WUU4 475 aaPredicted RBP12.84□□□□□ -0.35
CNIH1-203ENST00000553660 GPKOWQ92917 476 aaPredicted RBP eCLIP12.84□□□□□ -0.35
CNIH1-203ENST00000553660 ATP8A2Q9NTI2 1148 aa12.84□□□□□ -0.35
CNIH1-203ENST00000553660 PKD2L1Q9P0L9 805 aa12.84□□□□□ -0.35
CNIH1-203ENST00000553660 STAP2Q9UGK3 403 aa12.84□□□□□ -0.35
CNIH1-203ENST00000553660 FKBPLQ9UIM3 349 aa12.84□□□□□ -0.35
CNIH1-203ENST00000553660 SLC45A1Q9Y2W3 748 aa12.84□□□□□ -0.35
CNIH1-203ENST00000553660 AFG3L2Q9Y4W6 797 aa12.84□□□□□ -0.35
CNIH1-203ENST00000553660 FOCADQ5VW36 1801 aa12.83□□□□□ -0.35
CNIH1-203ENST00000553660 A0A0G2JLL6 359 aaPredicted RBP12.83□□□□□ -0.36
CNIH1-203ENST00000553660 WNT7AO00755 349 aa12.83□□□□□ -0.36
CNIH1-203ENST00000553660 FKTNO75072 461 aa12.83□□□□□ -0.36
CNIH1-203ENST00000553660 ASNSP08243 561 aa12.83□□□□□ -0.36
CNIH1-203ENST00000553660 MX1P20591 662 aa12.83□□□□□ -0.36
CNIH1-203ENST00000553660 USP5P45974 858 aa12.83□□□□□ -0.36
CNIH1-203ENST00000553660 FOXC1Q12948 553 aa12.83□□□□□ -0.36
CNIH1-203ENST00000553660 CRHR2Q13324 411 aa12.83□□□□□ -0.36
CNIH1-203ENST00000553660 MOGSQ13724 837 aa12.83□□□□□ -0.36
CNIH1-203ENST00000553660 TATDN1Q6P1N9 297 aa12.83□□□□□ -0.36
CNIH1-203ENST00000553660 PRRT2Q7Z6L0 340 aaPredicted RBP12.83□□□□□ -0.36
CNIH1-203ENST00000553660 CTU1Q7Z7A3 348 aaKnown RBP12.83□□□□□ -0.36
CNIH1-203ENST00000553660 PNMA1Q8ND90 353 aa12.83□□□□□ -0.36
CNIH1-203ENST00000553660 PI4K2BQ8TCG2 481 aa12.83□□□□□ -0.36
CNIH1-203ENST00000553660 EDC3Q96F86 508 aaKnown RBP12.83□□□□□ -0.36
CNIH1-203ENST00000553660 ZFYVE28Q9HCC9 887 aa12.83□□□□□ -0.36
CNIH1-203ENST00000553660 SERPINB13Q9UIV8 391 aa12.83□□□□□ -0.36
CNIH1-203ENST00000553660 PALD1Q9ULE6 856 aa12.83□□□□□ -0.36
CNIH1-203ENST00000553660 SUPT16HQ9Y5B9 1047 aaKnown RBP12.83□□□□□ -0.36
CNIH1-203ENST00000553660 ZHX2Q9Y6X8 837 aa12.83□□□□□ -0.36
CNIH1-203ENST00000553660 MYO5AQ9Y4I1 1855 aaKnown RBP12.82□□□□□ -0.36
CNIH1-203ENST00000553660 BTBD19C9JJ37 291 aa12.82□□□□□ -0.36
CNIH1-203ENST00000553660 PRR20EP86478 221 aa12.82□□□□□ -0.36
CNIH1-203ENST00000553660 PRR20CP86479 221 aa12.82□□□□□ -0.36
CNIH1-203ENST00000553660 PRR20DP86480 221 aa12.82□□□□□ -0.36
CNIH1-203ENST00000553660 PRR20BP86481 221 aa12.82□□□□□ -0.36
CNIH1-203ENST00000553660 PRR20AP86496 221 aa12.82□□□□□ -0.36
CNIH1-203ENST00000553660 ANKRD45Q5TZF3 282 aa12.82□□□□□ -0.36
CNIH1-203ENST00000553660 FAM43AQ8N2R8 423 aa12.82□□□□□ -0.36
CNIH1-203ENST00000553660 WDR18Q9BV38 432 aa12.82□□□□□ -0.36
CNIH1-203ENST00000553660 DNAJC18Q9H819 358 aa12.82□□□□□ -0.36
CNIH1-203ENST00000553660 AK9Q5TCS8 1911 aa12.82□□□□□ -0.36
CNIH1-203ENST00000553660 USP17L5A8MUK1 530 aa12.81□□□□□ -0.36
CNIH1-203ENST00000553660 TLR2O60603 784 aa12.81□□□□□ -0.36
CNIH1-203ENST00000553660 GABPAQ06546 454 aa12.81□□□□□ -0.36
CNIH1-203ENST00000553660 TAF1CQ15572 869 aaPredicted RBP12.81□□□□□ -0.36
CNIH1-203ENST00000553660 GIMAP6Q6P9H5 292 aa12.81□□□□□ -0.36
CNIH1-203ENST00000553660 LCORLQ8N3X6 602 aa12.81□□□□□ -0.36
CNIH1-203ENST00000553660 CRACR2BQ8N4Y2 399 aaPredicted RBP12.81□□□□□ -0.36
CNIH1-203ENST00000553660 ZNF280CQ8ND82 737 aa12.81□□□□□ -0.36
CNIH1-203ENST00000553660 EXOC6Q8TAG9 804 aa12.81□□□□□ -0.36
CNIH1-203ENST00000553660 R3HDMLQ9H3Y0 253 aa12.81□□□□□ -0.36
CNIH1-203ENST00000553660 AS3MTQ9HBK9 375 aa12.81□□□□□ -0.36
CNIH1-203ENST00000553660 DCP1AQ9NPI6 582 aaPredicted RBP12.81□□□□□ -0.36
CNIH1-203ENST00000553660 TNFRSF10AO00220 468 aa12.8□□□□□ -0.36
CNIH1-203ENST00000553660 RNF113AO15541 343 aaKnown RBP12.8□□□□□ -0.36
CNIH1-203ENST00000553660 SP3Q02447 781 aa12.8□□□□□ -0.36
CNIH1-203ENST00000553660 DGKZQ13574 1117 aa12.8□□□□□ -0.36
CNIH1-203ENST00000553660 RRP1BQ14684 758 aaKnown RBP12.8□□□□□ -0.36
CNIH1-203ENST00000553660 ARHGEF6Q15052 776 aa12.8□□□□□ -0.36
CNIH1-203ENST00000553660 GPAT2Q6NUI2 795 aa12.8□□□□□ -0.36
CNIH1-203ENST00000553660 APPBP2Q92624 585 aa12.8□□□□□ -0.36
CNIH1-203ENST00000553660 ERO1AQ96HE7 468 aa12.8□□□□□ -0.36
CNIH1-203ENST00000553660 IRX2Q9BZI1 471 aaPredicted RBP12.8□□□□□ -0.36
CNIH1-203ENST00000553660 MCOLN1Q9GZU1 580 aa12.8□□□□□ -0.36
CNIH1-203ENST00000553660 DOCK1Q14185 1865 aa12.8□□□□□ -0.36
CNIH1-203ENST00000553660 CDK5RAP2Q96SN8 1893 aa12.8□□□□□ -0.36
CNIH1-203ENST00000553660 SIPA1L1O43166 1804 aa12.79□□□□□ -0.36
CNIH1-203ENST00000553660 MBD4O95243 580 aa12.79□□□□□ -0.36
CNIH1-203ENST00000553660 GNRH1P01148 92 aa12.79□□□□□ -0.36
CNIH1-203ENST00000553660 SLURP2P0DP57 97 aa12.79□□□□□ -0.36
CNIH1-203ENST00000553660 GNAT2P19087 354 aa12.79□□□□□ -0.36
CNIH1-203ENST00000553660 PDE1AP54750 535 aa12.79□□□□□ -0.36
CNIH1-203ENST00000553660 ABHD8Q96I13 439 aa12.79□□□□□ -0.36
CNIH1-203ENST00000553660 PARK7Q99497 189 aaKnown RBP12.79□□□□□ -0.36
CNIH1-203ENST00000553660 BCL11AQ9H165 835 aa12.79□□□□□ -0.36
CNIH1-203ENST00000553660 OSBPL3Q9H4L5 887 aa12.79□□□□□ -0.36
CNIH1-203ENST00000553660 SWAP70Q9UH65 585 aa12.79□□□□□ -0.36
CNIH1-203ENST00000553660 SAP30BPQ9UHR5 308 aaKnown RBP12.79□□□□□ -0.36
CNIH1-203ENST00000553660 ZBTB21Q9ULJ3 1066 aa12.79□□□□□ -0.36
CNIH1-203ENST00000553660 CASP8AP2Q9UKL3 1982 aa12.79□□□□□ -0.36
CNIH1-203ENST00000553660 DDX60LQ5H9U9 1706 aaKnown RBP12.79□□□□□ -0.36
CNIH1-203ENST00000553660 FAM196BA6NMK8 535 aa12.78□□□□□ -0.36
CNIH1-203ENST00000553660 C19orf81C9J6K1 198 aa12.78□□□□□ -0.36
CNIH1-203ENST00000553660 PDHXO00330 501 aa12.78□□□□□ -0.36
CNIH1-203ENST00000553660 GFRA3O60609 400 aa12.78□□□□□ -0.36
CNIH1-203ENST00000553660 POLR3DP05423 398 aaPredicted RBP12.78□□□□□ -0.36
CNIH1-203ENST00000553660 PLCD1P51178 756 aa12.78□□□□□ -0.36
CNIH1-203ENST00000553660 BACE1P56817 501 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms