RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 AKT3Q9Y243 479 aa7.63□□□□□ -1.19
SCFD1-208ENST00000553278 CAPNS1P04632 268 aa7.62□□□□□ -1.19
SCFD1-208ENST00000553278 CD247P20963 164 aa7.62□□□□□ -1.19
SCFD1-208ENST00000553278 CD68P34810 354 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-208ENST00000553278 IGFALSP35858 605 aa7.62□□□□□ -1.19
SCFD1-208ENST00000553278 CAP2P40123 477 aa7.62□□□□□ -1.19
SCFD1-208ENST00000553278 OS9Q13438 667 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-208ENST00000553278 HDAC1Q13547 482 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-208ENST00000553278 UBE4AQ14139 1066 aa7.62□□□□□ -1.19
SCFD1-208ENST00000553278 GAS6Q14393 721 aa7.62□□□□□ -1.19
SCFD1-208ENST00000553278 SETDB1Q15047 1291 aa7.62□□□□□ -1.19
SCFD1-208ENST00000553278 LRRC41Q15345 812 aa7.62□□□□□ -1.19
SCFD1-208ENST00000553278 PCBP1Q15365 356 aaKnown RBP eCLIP7.62□□□□□ -1.19
SCFD1-208ENST00000553278 SLCO4C1Q6ZQN7 724 aa7.62□□□□□ -1.19
SCFD1-208ENST00000553278 UBE2R2Q712K3 238 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-208ENST00000553278 TRIM59Q8IWR1 403 aa7.62□□□□□ -1.19
SCFD1-208ENST00000553278 MYO1HQ8N1T3 1032 aa7.62□□□□□ -1.19
SCFD1-208ENST00000553278 PTPRN2Q92932 1015 aa7.62□□□□□ -1.19
SCFD1-208ENST00000553278 USP7Q93009 1102 aa7.62□□□□□ -1.19
SCFD1-208ENST00000553278 RCC1LQ96I51 464 aaKnown RBP7.62□□□□□ -1.19
SCFD1-208ENST00000553278 ZNF512BQ96KM6 892 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-208ENST00000553278 MRGPRX3Q96LB0 322 aa7.62□□□□□ -1.19
SCFD1-208ENST00000553278 MAGEB10Q96LZ2 347 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-208ENST00000553278 TTC1Q99614 292 aa7.62□□□□□ -1.19
SCFD1-208ENST00000553278 LGR4Q9BXB1 951 aa7.62□□□□□ -1.19
SCFD1-208ENST00000553278 PUS7LQ9H0K6 701 aaKnown RBP7.62□□□□□ -1.19
SCFD1-208ENST00000553278 ZIM2Q9NZV7 527 aa7.62□□□□□ -1.19
SCFD1-208ENST00000553278 EMC9Q9Y3B6 208 aa7.62□□□□□ -1.19
SCFD1-208ENST00000553278 ZNF451Q9Y4E5 1061 aa7.62□□□□□ -1.19
SCFD1-208ENST00000553278 FAM83GA6ND36 823 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 B4E1Z4 1266 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 DDX3YO15523 660 aaKnown RBP7.61□□□□□ -1.19
SCFD1-208ENST00000553278 TBX1O43435 398 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 AKAP10O43572 662 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 KPNA6O60684 536 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 DLGAP3O95886 979 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 CST3P01034 146 aaPredicted RBP7.61□□□□□ -1.19
SCFD1-208ENST00000553278 ITGA4P13612 1032 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 NTF4P34130 210 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 RNF4P78317 190 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 INSM1Q01101 510 aaPredicted RBP7.61□□□□□ -1.19
SCFD1-208ENST00000553278 NKG7Q16617 165 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 CFAP100Q494V2 611 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 PRAMEF13Q5VWM6 474 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 PASD1Q8IV76 773 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 C7orf61Q8IZ16 206 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 GALNT11Q8NCW6 608 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 KCTD13Q8WZ19 329 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 CHMP4CQ96CF2 233 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 CCDC140Q96MF4 163 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 DISC1Q9NRI5 854 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 AASDHPPTQ9NRN7 309 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 PPP1R9AQ9ULJ8 1098 aa7.61□□□□□ -1.19
SCFD1-208ENST00000553278 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.6□□□□□ -1.19
SCFD1-208ENST00000553278 M0R082 166 aa7.6□□□□□ -1.19
SCFD1-208ENST00000553278 TM4SF5O14894 197 aa7.6□□□□□ -1.19
SCFD1-208ENST00000553278 ADAM11O75078 769 aa7.6□□□□□ -1.19
SCFD1-208ENST00000553278 MYL1P05976 194 aa7.6□□□□□ -1.19
SCFD1-208ENST00000553278 JMJD7P0C870 316 aa7.6□□□□□ -1.19
SCFD1-208ENST00000553278 PIN1Q13526 163 aaPredicted RBP7.6□□□□□ -1.19
SCFD1-208ENST00000553278 SLBPQ14493 270 aaKnown RBP eCLIP7.6□□□□□ -1.19
SCFD1-208ENST00000553278 LHFPL2Q6ZUX7 228 aa7.6□□□□□ -1.19
SCFD1-208ENST00000553278 MAMDC2Q7Z304 686 aaPredicted RBP7.6□□□□□ -1.19
SCFD1-208ENST00000553278 FGD2Q7Z6J4 655 aa7.6□□□□□ -1.19
SCFD1-208ENST00000553278 ZBTB46Q86UZ6 589 aa7.6□□□□□ -1.19
SCFD1-208ENST00000553278 FAM9AQ8IZU1 332 aaPredicted RBP7.6□□□□□ -1.19
SCFD1-208ENST00000553278 OR2W6PQ8NHA6 318 aa7.6□□□□□ -1.19
SCFD1-208ENST00000553278 ZNF417Q8TAU3 575 aa7.6□□□□□ -1.19
SCFD1-208ENST00000553278 FANCD2OSQ96PS1 177 aa7.6□□□□□ -1.19
SCFD1-208ENST00000553278 ZNF587Q96SQ5 575 aaPredicted RBP7.6□□□□□ -1.19
SCFD1-208ENST00000553278 MTFR1LQ9H019 292 aa7.6□□□□□ -1.19
SCFD1-208ENST00000553278 IFT22Q9H7X7 185 aa7.6□□□□□ -1.19
SCFD1-208ENST00000553278 SPEF1Q9Y4P9 236 aa7.6□□□□□ -1.19
SCFD1-208ENST00000553278 A0A087WZG4 1122 aa7.59□□□□□ -1.19
SCFD1-208ENST00000553278 WIPF1O43516 503 aa7.59□□□□□ -1.19
SCFD1-208ENST00000553278 ZEB2O60315 1214 aa7.59□□□□□ -1.19
SCFD1-208ENST00000553278 DLX3O60479 287 aa7.59□□□□□ -1.19
SCFD1-208ENST00000553278 EPXP11678 715 aa7.59□□□□□ -1.19
SCFD1-208ENST00000553278 AUHQ13825 339 aaKnown RBP7.59□□□□□ -1.19
SCFD1-208ENST00000553278 ZNF460Q14592 562 aa7.59□□□□□ -1.19
SCFD1-208ENST00000553278 NBPF12Q5TAG4 269 aaPredicted RBP7.59□□□□□ -1.19
SCFD1-208ENST00000553278 ARHGEF39Q8N4T4 335 aa7.59□□□□□ -1.19
SCFD1-208ENST00000553278 ADCY4Q8NFM4 1077 aa7.59□□□□□ -1.19
SCFD1-208ENST00000553278 PI4K2BQ8TCG2 481 aa7.59□□□□□ -1.19
SCFD1-208ENST00000553278 BTN2A2Q8WVV5 523 aa7.59□□□□□ -1.19
SCFD1-208ENST00000553278 YIPF4Q9BSR8 244 aa7.59□□□□□ -1.19
SCFD1-208ENST00000553278 FOXQ1Q9C009 403 aa7.59□□□□□ -1.19
SCFD1-208ENST00000553278 PIDD1Q9HB75 910 aa7.59□□□□□ -1.19
SCFD1-208ENST00000553278 GP6Q9HCN6 339 aa7.59□□□□□ -1.19
SCFD1-208ENST00000553278 SSU72Q9NP77 194 aaKnown RBP7.59□□□□□ -1.19
SCFD1-208ENST00000553278 AP4E1Q9UPM8 1137 aa7.59□□□□□ -1.19
SCFD1-208ENST00000553278 APOBEC2Q9Y235 224 aaKnown RBP7.59□□□□□ -1.19
SCFD1-208ENST00000553278 GOLGA6CA6NDK9 693 aa7.58□□□□□ -1.2
SCFD1-208ENST00000553278 GOLGA6BA6NDN3 693 aa7.58□□□□□ -1.2
SCFD1-208ENST00000553278 KCNH1O95259 989 aa7.58□□□□□ -1.2
SCFD1-208ENST00000553278 GOLGA6DP0CG33 693 aa7.58□□□□□ -1.2
SCFD1-208ENST00000553278 KCNJ6P48051 423 aa7.58□□□□□ -1.2
SCFD1-208ENST00000553278 TMPRSS15P98073 1019 aa7.58□□□□□ -1.2
SCFD1-208ENST00000553278 MAP4K2Q12851 820 aa7.58□□□□□ -1.2
SCFD1-208ENST00000553278 TTLL4Q14679 1199 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms