RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 TAF1CQ15572 869 aaPredicted RBP7.29□□□□□ -1.24
SCAF11-214ENST00000550893 AGMOQ6ZNB7 445 aa7.29□□□□□ -1.24
SCAF11-214ENST00000550893 PLPPR2Q96GM1 343 aa7.29□□□□□ -1.24
SCAF11-214ENST00000550893 BSDC1Q9NW68 430 aaPredicted RBP7.29□□□□□ -1.24
SCAF11-214ENST00000550893 TBX22Q9Y458 520 aa7.29□□□□□ -1.24
SCAF11-214ENST00000550893 COL22A1Q8NFW1 1626 aaPredicted RBP7.29□□□□□ -1.24
SCAF11-214ENST00000550893 TOPAZ1Q8N9V7 1692 aa7.28□□□□□ -1.24
SCAF11-214ENST00000550893 ADGRF5Q8IZF2 1346 aa7.28□□□□□ -1.24
SCAF11-214ENST00000550893 TRPM3Q9HCF6 1732 aaPredicted RBP7.28□□□□□ -1.24
SCAF11-214ENST00000550893 KIAA1210Q9ULL0 1709 aa7.28□□□□□ -1.24
SCAF11-214ENST00000550893 MARF1Q9Y4F3 1742 aaKnown RBP7.28□□□□□ -1.24
SCAF11-214ENST00000550893 SORBS3O60504 671 aa7.28□□□□□ -1.24
SCAF11-214ENST00000550893 SEPT6Q14141 434 aa7.28□□□□□ -1.24
SCAF11-214ENST00000550893 CYFIP1Q7L576 1253 aa7.28□□□□□ -1.24
SCAF11-214ENST00000550893 HDXQ7Z353 690 aa7.28□□□□□ -1.24
SCAF11-214ENST00000550893 TOP6BLQ8N6T0 577 aa7.28□□□□□ -1.24
SCAF11-214ENST00000550893 ANGEL1Q9UNK9 670 aaKnown RBP7.28□□□□□ -1.24
SCAF11-214ENST00000550893 DHX57Q6P158 1386 aaKnown RBP7.28□□□□□ -1.24
SCAF11-214ENST00000550893 USP31Q70CQ4 1352 aa7.28□□□□□ -1.24
SCAF11-214ENST00000550893 PRAMEF27A3QJZ7 478 aa7.27□□□□□ -1.25
SCAF11-214ENST00000550893 LMNB1P20700 586 aa7.27□□□□□ -1.25
SCAF11-214ENST00000550893 ST13P50502 369 aaKnown RBP7.27□□□□□ -1.25
SCAF11-214ENST00000550893 WIPI1Q5MNZ9 446 aaPredicted RBP7.27□□□□□ -1.25
SCAF11-214ENST00000550893 NFXL1Q6ZNB6 911 aa7.27□□□□□ -1.25
SCAF11-214ENST00000550893 CDC37L1Q7L3B6 337 aa7.27□□□□□ -1.25
SCAF11-214ENST00000550893 VSIG10LQ86VR7 867 aa7.27□□□□□ -1.25
SCAF11-214ENST00000550893 FAM181AQ8N9Y4 354 aa7.27□□□□□ -1.25
SCAF11-214ENST00000550893 MPHOSPH9Q99550 1183 aa7.27□□□□□ -1.25
SCAF11-214ENST00000550893 NOC4LQ9BVI4 516 aaKnown RBP7.27□□□□□ -1.25
SCAF11-214ENST00000550893 KRTAP9-9Q9BYP9 154 aa7.27□□□□□ -1.25
SCAF11-214ENST00000550893 KRTAP9-4Q9BYQ2 154 aa7.27□□□□□ -1.25
SCAF11-214ENST00000550893 EID1Q9Y6B2 187 aa7.27□□□□□ -1.25
SCAF11-214ENST00000550893 U3KQE9 123 aa7.27□□□□□ -1.25
SCAF11-214ENST00000550893 PLEKHH1Q9ULM0 1364 aa7.27□□□□□ -1.25
SCAF11-214ENST00000550893 CCDC144AA2RUR9 1427 aa7.27□□□□□ -1.25
SCAF11-214ENST00000550893 EP400Q96L91 3159 aa7.26□□□□□ -1.25
SCAF11-214ENST00000550893 TFE3P19532 575 aaPredicted RBP7.26□□□□□ -1.25
SCAF11-214ENST00000550893 ZNF507Q8TCN5 953 aa7.26□□□□□ -1.25
SCAF11-214ENST00000550893 VTI1BQ9UEU0 232 aa7.26□□□□□ -1.25
SCAF11-214ENST00000550893 TLR6Q9Y2C9 796 aa7.26□□□□□ -1.25
SCAF11-214ENST00000550893 SNCAIPQ9Y6H5 919 aa7.26□□□□□ -1.25
SCAF11-214ENST00000550893 TRPM1Q7Z4N2 1603 aa7.26□□□□□ -1.25
SCAF11-214ENST00000550893 DLC1Q96QB1 1528 aa7.26□□□□□ -1.25
SCAF11-214ENST00000550893 PXDNQ92626 1479 aa7.25□□□□□ -1.25
SCAF11-214ENST00000550893 PLD6Q8N2A8 252 aaKnown RBP7.25□□□□□ -1.25
SCAF11-214ENST00000550893 KCT2Q8NC54 265 aa7.25□□□□□ -1.25
SCAF11-214ENST00000550893 CRELD1Q96HD1 420 aa7.25□□□□□ -1.25
SCAF11-214ENST00000550893 WNT10AQ9GZT5 417 aa7.25□□□□□ -1.25
SCAF11-214ENST00000550893 FBRSQ9HAH7 460 aa7.25□□□□□ -1.25
SCAF11-214ENST00000550893 MRS2Q9HD23 443 aa7.25□□□□□ -1.25
SCAF11-214ENST00000550893 PRDM10Q9NQV6 1147 aa7.25□□□□□ -1.25
SCAF11-214ENST00000550893 RGS17Q9UGC6 210 aaPredicted RBP7.25□□□□□ -1.25
SCAF11-214ENST00000550893 ALS2Q96Q42 1657 aa7.25□□□□□ -1.25
SCAF11-214ENST00000550893 C1orf167Q5SNV9 1468 aa7.24□□□□□ -1.25
SCAF11-214ENST00000550893 GFRA2O00451 464 aa7.24□□□□□ -1.25
SCAF11-214ENST00000550893 RLBP1P12271 317 aa7.24□□□□□ -1.25
SCAF11-214ENST00000550893 ARMCX6Q7L4S7 300 aa7.24□□□□□ -1.25
SCAF11-214ENST00000550893 FAM214BQ7L5A3 538 aa7.24□□□□□ -1.25
SCAF11-214ENST00000550893 PHC3Q8NDX5 983 aa7.24□□□□□ -1.25
SCAF11-214ENST00000550893 HEXIM2Q96MH2 286 aaKnown RBP7.24□□□□□ -1.25
SCAF11-214ENST00000550893 MIR1-1HGQ9H1L0 117 aa7.24□□□□□ -1.25
SCAF11-214ENST00000550893 KIF1AQ12756 1690 aa7.23□□□□□ -1.25
SCAF11-214ENST00000550893 KRTAP4-8A0A0G2JLE6 195 aa7.23□□□□□ -1.25
SCAF11-214ENST00000550893 F6X3S4 739 aa7.23□□□□□ -1.25
SCAF11-214ENST00000550893 IRAK1P51617 712 aa7.23□□□□□ -1.25
SCAF11-214ENST00000550893 OXCT1P55809 520 aa7.23□□□□□ -1.25
SCAF11-214ENST00000550893 ETF1P62495 437 aaKnown RBP7.23□□□□□ -1.25
SCAF11-214ENST00000550893 SLBPQ14493 270 aaKnown RBP eCLIP7.23□□□□□ -1.25
SCAF11-214ENST00000550893 NKG7Q16617 165 aa7.23□□□□□ -1.25
SCAF11-214ENST00000550893 ABI1Q8IZP0 508 aa7.23□□□□□ -1.25
SCAF11-214ENST00000550893 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.23□□□□□ -1.25
SCAF11-214ENST00000550893 FLCNQ8NFG4 579 aa7.23□□□□□ -1.25
SCAF11-214ENST00000550893 NETO1Q8TDF5 533 aa7.23□□□□□ -1.25
SCAF11-214ENST00000550893 BCL7CQ8WUZ0 217 aaPredicted RBP7.23□□□□□ -1.25
SCAF11-214ENST00000550893 JARID2Q92833 1246 aaPredicted RBP7.23□□□□□ -1.25
SCAF11-214ENST00000550893 FBXL18Q96ME1 805 aa7.23□□□□□ -1.25
SCAF11-214ENST00000550893 BCL2L13Q9BXK5 485 aa7.23□□□□□ -1.25
SCAF11-214ENST00000550893 YTHDC2Q9H6S0 1430 aaKnown RBP7.23□□□□□ -1.25
SCAF11-214ENST00000550893 LRPPRCP42704 1394 aaKnown RBP7.22□□□□□ -1.25
SCAF11-214ENST00000550893 MSH6P52701 1360 aa7.22□□□□□ -1.25
SCAF11-214ENST00000550893 ZBTB7CA1YPR0 619 aa7.22□□□□□ -1.25
SCAF11-214ENST00000550893 GRK4P32298 578 aa7.22□□□□□ -1.25
SCAF11-214ENST00000550893 BNIP3Q12983 259 aa7.22□□□□□ -1.25
SCAF11-214ENST00000550893 MCTP1Q6DN14 999 aa7.22□□□□□ -1.25
SCAF11-214ENST00000550893 ARHGAP27Q6ZUM4 889 aa7.22□□□□□ -1.25
SCAF11-214ENST00000550893 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
SCAF11-214ENST00000550893 TP53INP2Q8IXH6 220 aa7.22□□□□□ -1.25
SCAF11-214ENST00000550893 GIPC2Q8TF65 315 aa7.22□□□□□ -1.25
SCAF11-214ENST00000550893 PAK6Q9NQU5 681 aaPredicted RBP7.22□□□□□ -1.25
SCAF11-214ENST00000550893 PLAGL2Q9UPG8 496 aa7.22□□□□□ -1.25
SCAF11-214ENST00000550893 DISP3Q9P2K9 1392 aa7.21□□□□□ -1.25
SCAF11-214ENST00000550893 TOM1O60784 492 aa7.21□□□□□ -1.26
SCAF11-214ENST00000550893 LRIG2O94898 1065 aa7.21□□□□□ -1.26
SCAF11-214ENST00000550893 EOMESO95936 686 aa7.21□□□□□ -1.26
SCAF11-214ENST00000550893 TSNAXIP1Q2TAA8 658 aa7.21□□□□□ -1.26
SCAF11-214ENST00000550893 ZNF574Q6ZN55 896 aaPredicted RBP7.21□□□□□ -1.26
SCAF11-214ENST00000550893 BRINP3Q76B58 766 aa7.21□□□□□ -1.26
SCAF11-214ENST00000550893 SPRED2Q7Z698 418 aa7.21□□□□□ -1.26
SCAF11-214ENST00000550893 WFDC3Q8IUB2 231 aa7.21□□□□□ -1.26
SCAF11-214ENST00000550893 MKNK2Q9HBH9 465 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms