RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 WDR46O15213 610 aaKnown RBP18.56■□□□□ 0.56
RAB5C-205ENST00000550013 EEF2P13639 858 aaKnown RBP18.56■□□□□ 0.56
RAB5C-205ENST00000550013 SLC39A5Q6ZMH5 540 aa18.56■□□□□ 0.56
RAB5C-205ENST00000550013 C16orf86Q6ZW13 317 aa18.56■□□□□ 0.56
RAB5C-205ENST00000550013 ABRAQ8N0Z2 381 aa18.56■□□□□ 0.56
RAB5C-205ENST00000550013 MAML3Q96JK9 1138 aa18.56■□□□□ 0.56
RAB5C-205ENST00000550013 FBXO28Q9NVF7 368 aa18.56■□□□□ 0.56
RAB5C-205ENST00000550013 SLC5A4Q9NY91 659 aa18.56■□□□□ 0.56
RAB5C-205ENST00000550013 FCER1AP12319 257 aa18.55■□□□□ 0.56
RAB5C-205ENST00000550013 PRKAG2Q9UGJ0 569 aa18.55■□□□□ 0.56
RAB5C-205ENST00000550013 SLC4A4Q9Y6R1 1079 aa18.55■□□□□ 0.56
RAB5C-205ENST00000550013 UNC80Q8N2C7 3258 aa18.55■□□□□ 0.56
RAB5C-205ENST00000550013 ADCYAP1R1P41586 468 aa18.54■□□□□ 0.56
RAB5C-205ENST00000550013 LRRC41Q15345 812 aa18.54■□□□□ 0.56
RAB5C-205ENST00000550013 UBE3CQ15386 1083 aa18.54■□□□□ 0.56
RAB5C-205ENST00000550013 TRIM60Q495X7 471 aa18.54■□□□□ 0.56
RAB5C-205ENST00000550013 FAM47AQ5JRC9 791 aa18.54■□□□□ 0.56
RAB5C-205ENST00000550013 CTR9Q6PD62 1173 aa18.54■□□□□ 0.56
RAB5C-205ENST00000550013 AMOTL1Q8IY63 956 aa18.54■□□□□ 0.56
RAB5C-205ENST00000550013 FERMT2Q96AC1 680 aa18.54■□□□□ 0.56
RAB5C-205ENST00000550013 PUS7LQ9H0K6 701 aaKnown RBP18.54■□□□□ 0.56
RAB5C-205ENST00000550013 PRDM5Q9NQX1 630 aaPredicted RBP18.54■□□□□ 0.56
RAB5C-205ENST00000550013 ADAMTS5Q9UNA0 930 aa18.54■□□□□ 0.56
RAB5C-205ENST00000550013 GREB1LQ9C091 1923 aaPredicted RBP18.54■□□□□ 0.56
RAB5C-205ENST00000550013 POTEB2H3BUK9 544 aa18.53■□□□□ 0.56
RAB5C-205ENST00000550013 SMARCA5O60264 1052 aaPredicted RBP18.53■□□□□ 0.56
RAB5C-205ENST00000550013 SLC25A27O95847 323 aa18.53■□□□□ 0.56
RAB5C-205ENST00000550013 PGK2P07205 417 aa18.53■□□□□ 0.56
RAB5C-205ENST00000550013 SNX17Q15036 470 aa18.53■□□□□ 0.56
RAB5C-205ENST00000550013 DIEXFQ68CQ4 756 aaKnown RBP18.53■□□□□ 0.56
RAB5C-205ENST00000550013 DDRGK1Q96HY6 314 aa18.53■□□□□ 0.56
RAB5C-205ENST00000550013 GUCD1Q96NT3 240 aa18.53■□□□□ 0.56
RAB5C-205ENST00000550013 MMP19Q99542 508 aa18.53■□□□□ 0.56
RAB5C-205ENST00000550013 RAD21O60216 631 aa18.52■□□□□ 0.56
RAB5C-205ENST00000550013 FAM83BQ5T0W9 1011 aa18.52■□□□□ 0.56
RAB5C-205ENST00000550013 FAM161BQ96MY7 647 aa18.52■□□□□ 0.56
RAB5C-205ENST00000550013 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.52■□□□□ 0.56
RAB5C-205ENST00000550013 KANSL2Q9H9L4 492 aa18.52■□□□□ 0.56
RAB5C-205ENST00000550013 PPP1R9AQ9ULJ8 1098 aa18.52■□□□□ 0.56
RAB5C-205ENST00000550013 VWA5AO00534 786 aa18.51■□□□□ 0.55
RAB5C-205ENST00000550013 TAL1P17542 331 aaPredicted RBP18.51■□□□□ 0.55
RAB5C-205ENST00000550013 SHHQ15465 462 aa18.51■□□□□ 0.55
RAB5C-205ENST00000550013 C9orf50Q5SZB4 431 aa18.51■□□□□ 0.55
RAB5C-205ENST00000550013 FAM109BQ6ICB4 259 aaPredicted RBP18.51■□□□□ 0.55
RAB5C-205ENST00000550013 SH3RF1Q7Z6J0 888 aa18.51■□□□□ 0.55
RAB5C-205ENST00000550013 RIOX2Q8IUF8 465 aa18.51■□□□□ 0.55
RAB5C-205ENST00000550013 REPS2Q8NFH8 660 aa18.51■□□□□ 0.55
RAB5C-205ENST00000550013 BADQ92934 168 aa18.51■□□□□ 0.55
RAB5C-205ENST00000550013 NUP88Q99567 741 aaPredicted RBP18.51■□□□□ 0.55
RAB5C-205ENST00000550013 GOPCQ9HD26 462 aa18.51■□□□□ 0.55
RAB5C-205ENST00000550013 PDLIM7Q9NR12 457 aa18.51■□□□□ 0.55
RAB5C-205ENST00000550013 TRIM43BA6NCK2 446 aa18.5■□□□□ 0.55
RAB5C-205ENST00000550013 STAT3P40763 770 aa18.5■□□□□ 0.55
RAB5C-205ENST00000550013 ZNF792Q3KQV3 632 aa18.5■□□□□ 0.55
RAB5C-205ENST00000550013 STK11IPQ8N1F8 1099 aa18.5■□□□□ 0.55
RAB5C-205ENST00000550013 TRIM43Q96BQ3 446 aaPredicted RBP18.5■□□□□ 0.55
RAB5C-205ENST00000550013 TINF2Q9BSI4 451 aa18.5■□□□□ 0.55
RAB5C-205ENST00000550013 LRRCC1Q9C099 1032 aa18.5■□□□□ 0.55
RAB5C-205ENST00000550013 XPNPEP3Q9NQH7 507 aa18.5■□□□□ 0.55
RAB5C-205ENST00000550013 ZNF214Q9UL59 606 aaPredicted RBP18.5■□□□□ 0.55
RAB5C-205ENST00000550013 PGK1P00558 417 aa18.49■□□□□ 0.55
RAB5C-205ENST00000550013 RARBP10826 455 aa18.49■□□□□ 0.55
RAB5C-205ENST00000550013 TLE2Q04725 743 aa18.49■□□□□ 0.55
RAB5C-205ENST00000550013 KCTD2Q14681 263 aa18.49■□□□□ 0.55
RAB5C-205ENST00000550013 C20orf194Q5TEA3 1177 aa18.49■□□□□ 0.55
RAB5C-205ENST00000550013 ZSCAN25Q6NSZ9 544 aa18.49■□□□□ 0.55
RAB5C-205ENST00000550013 LENG1Q96BZ8 264 aaPredicted RBP18.49■□□□□ 0.55
RAB5C-205ENST00000550013 STRBPQ96SI9 672 aaKnown RBP18.49■□□□□ 0.55
RAB5C-205ENST00000550013 ARPP21Q9UBL0 812 aaPredicted RBP18.49■□□□□ 0.55
RAB5C-205ENST00000550013 NRBP1Q9UHY1 535 aa18.49■□□□□ 0.55
RAB5C-205ENST00000550013 PHF24Q9UPV7 400 aa18.49■□□□□ 0.55
RAB5C-205ENST00000550013 MYH4Q9Y623 1939 aa18.49■□□□□ 0.55
RAB5C-205ENST00000550013 RASA1P20936 1047 aa18.48■□□□□ 0.55
RAB5C-205ENST00000550013 CHMP4BQ9H444 224 aaKnown RBP18.48■□□□□ 0.55
RAB5C-205ENST00000550013 DIS3Q9Y2L1 958 aaKnown RBP18.48■□□□□ 0.55
RAB5C-205ENST00000550013 EYSQ5T1H1 3165 aa18.48■□□□□ 0.55
RAB5C-205ENST00000550013 GSG1L2A8MUP6 293 aa18.47■□□□□ 0.55
RAB5C-205ENST00000550013 ZNF865P0CJ78 1059 aaPredicted RBP18.47■□□□□ 0.55
RAB5C-205ENST00000550013 SBK1Q52WX2 424 aa18.47■□□□□ 0.55
RAB5C-205ENST00000550013 ZNF697Q5TEC3 545 aa18.47■□□□□ 0.55
RAB5C-205ENST00000550013 C1orf53Q5VUE5 145 aa18.47■□□□□ 0.55
RAB5C-205ENST00000550013 ECHDC1Q9NTX5 307 aa18.47■□□□□ 0.55
RAB5C-205ENST00000550013 RCAN3Q9UKA8 241 aa18.47■□□□□ 0.55
RAB5C-205ENST00000550013 ROBO3Q96MS0 1386 aa18.46■□□□□ 0.55
RAB5C-205ENST00000550013 MINDY4BA8MYZ0 360 aa18.46■□□□□ 0.55
RAB5C-205ENST00000550013 NDUFB10O96000 172 aa18.46■□□□□ 0.55
RAB5C-205ENST00000550013 ITGB8P26012 769 aa18.46■□□□□ 0.55
RAB5C-205ENST00000550013 COPB2P35606 906 aa18.46■□□□□ 0.55
RAB5C-205ENST00000550013 TSHZ3Q63HK5 1081 aa18.46■□□□□ 0.55
RAB5C-205ENST00000550013 RNF180Q86T96 592 aa18.46■□□□□ 0.55
RAB5C-205ENST00000550013 OSBP2Q969R2 916 aa18.46■□□□□ 0.55
RAB5C-205ENST00000550013 SLF1Q9BQI6 1058 aa18.46■□□□□ 0.55
RAB5C-205ENST00000550013 RIPK3Q9Y572 518 aa18.46■□□□□ 0.55
RAB5C-205ENST00000550013 MCM3APO60318 1980 aa18.46■□□□□ 0.55
RAB5C-205ENST00000550013 A0A1W2PQ45 241 aaPredicted RBP18.45■□□□□ 0.54
RAB5C-205ENST00000550013 A0A1W2PQY0 241 aa18.45■□□□□ 0.54
RAB5C-205ENST00000550013 F5H6K3 240 aa18.45■□□□□ 0.54
RAB5C-205ENST00000550013 KLRC3Q07444 240 aa18.45■□□□□ 0.54
RAB5C-205ENST00000550013 SNRNP48Q6IEG0 339 aaKnown RBP18.45■□□□□ 0.54
RAB5C-205ENST00000550013 TEX13BQ9BXU2 312 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms