RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 GOPCQ9HD26 462 aa16.33■□□□□ 0.2
TROAP-211ENST00000549891 NRBP1Q9UHY1 535 aa16.33■□□□□ 0.2
TROAP-211ENST00000549891 LAMA2P24043 3122 aaKnown RBP16.33■□□□□ 0.2
TROAP-211ENST00000549891 USP17L12C9JPN9 530 aa16.32■□□□□ 0.2
TROAP-211ENST00000549891 USP17L21D6R901 530 aa16.32■□□□□ 0.2
TROAP-211ENST00000549891 MYCNP04198 464 aaPredicted RBP16.32■□□□□ 0.2
TROAP-211ENST00000549891 COPB2P35606 906 aa16.32■□□□□ 0.2
TROAP-211ENST00000549891 SAMD1Q6SPF0 538 aaPredicted RBP16.32■□□□□ 0.2
TROAP-211ENST00000549891 SIRT2Q8IXJ6 389 aa16.32■□□□□ 0.2
TROAP-211ENST00000549891 COG6Q9Y2V7 657 aa16.32■□□□□ 0.2
TROAP-211ENST00000549891 POTEB2H3BUK9 544 aa16.31■□□□□ 0.2
TROAP-211ENST00000549891 EEF2P13639 858 aaKnown RBP16.31■□□□□ 0.2
TROAP-211ENST00000549891 KCTD2Q14681 263 aa16.31■□□□□ 0.2
TROAP-211ENST00000549891 TMEM132BQ14DG7 1078 aa16.31■□□□□ 0.2
TROAP-211ENST00000549891 C1orf53Q5VUE5 145 aa16.31■□□□□ 0.2
TROAP-211ENST00000549891 ANO1Q5XXA6 986 aa16.31■□□□□ 0.2
TROAP-211ENST00000549891 CLEC10AQ8IUN9 316 aa16.31■□□□□ 0.2
TROAP-211ENST00000549891 MMP19Q99542 508 aa16.31■□□□□ 0.2
TROAP-211ENST00000549891 ARPP21Q9UBL0 812 aaPredicted RBP16.31■□□□□ 0.2
TROAP-211ENST00000549891 ADAMTS5Q9UNA0 930 aa16.31■□□□□ 0.2
TROAP-211ENST00000549891 SLC4A4Q9Y6R1 1079 aa16.31■□□□□ 0.2
TROAP-211ENST00000549891 RARBP10826 455 aa16.3■□□□□ 0.2
TROAP-211ENST00000549891 SNX17Q15036 470 aa16.3■□□□□ 0.2
TROAP-211ENST00000549891 LRRC41Q15345 812 aa16.3■□□□□ 0.2
TROAP-211ENST00000549891 RIOX2Q8IUF8 465 aa16.3■□□□□ 0.2
TROAP-211ENST00000549891 LRRCC1Q9C099 1032 aa16.3■□□□□ 0.2
TROAP-211ENST00000549891 PRDM5Q9NQX1 630 aaPredicted RBP16.3■□□□□ 0.2
TROAP-211ENST00000549891 DIS3Q9Y2L1 958 aaKnown RBP16.3■□□□□ 0.2
TROAP-211ENST00000549891 GREB1LQ9C091 1923 aaPredicted RBP16.29■□□□□ 0.2
TROAP-211ENST00000549891 CYP2D7A0A087X1C5 515 aa16.29■□□□□ 0.2
TROAP-211ENST00000549891 STAT3P40763 770 aa16.29■□□□□ 0.2
TROAP-211ENST00000549891 ADCYAP1R1P41586 468 aa16.29■□□□□ 0.2
TROAP-211ENST00000549891 SLFNL1Q499Z3 407 aa16.29■□□□□ 0.2
TROAP-211ENST00000549891 PRAMEF19Q5SWL8 479 aa16.29■□□□□ 0.2
TROAP-211ENST00000549891 ZNF697Q5TEC3 545 aa16.29■□□□□ 0.2
TROAP-211ENST00000549891 CTR9Q6PD62 1173 aa16.29■□□□□ 0.2
TROAP-211ENST00000549891 RNF180Q86T96 592 aa16.29■□□□□ 0.2
TROAP-211ENST00000549891 XPNPEP3Q9NQH7 507 aa16.29■□□□□ 0.2
TROAP-211ENST00000549891 PPP1R9AQ9ULJ8 1098 aa16.29■□□□□ 0.2
TROAP-211ENST00000549891 MYH4Q9Y623 1939 aa16.29■□□□□ 0.2
TROAP-211ENST00000549891 VWA5AO00534 786 aa16.28■□□□□ 0.2
TROAP-211ENST00000549891 RAD21O60216 631 aa16.28■□□□□ 0.2
TROAP-211ENST00000549891 TRIM60Q495X7 471 aa16.28■□□□□ 0.2
TROAP-211ENST00000549891 FAM47AQ5JRC9 791 aa16.28■□□□□ 0.2
TROAP-211ENST00000549891 DIEXFQ68CQ4 756 aaKnown RBP16.28■□□□□ 0.2
TROAP-211ENST00000549891 TINF2Q9BSI4 451 aa16.28■□□□□ 0.2
TROAP-211ENST00000549891 ROBO3Q96MS0 1386 aa16.27■□□□□ 0.2
TROAP-211ENST00000549891 FAM83BQ5T0W9 1011 aa16.27■□□□□ 0.2
TROAP-211ENST00000549891 FERMT2Q96AC1 680 aa16.27■□□□□ 0.2
TROAP-211ENST00000549891 PUS7LQ9H0K6 701 aaKnown RBP16.27■□□□□ 0.2
TROAP-211ENST00000549891 PDLIM7Q9NR12 457 aa16.27■□□□□ 0.2
TROAP-211ENST00000549891 FBXO28Q9NVF7 368 aa16.27■□□□□ 0.2
TROAP-211ENST00000549891 PHF24Q9UPV7 400 aa16.27■□□□□ 0.2
TROAP-211ENST00000549891 CNPY2Q9Y2B0 182 aa16.27■□□□□ 0.2
TROAP-211ENST00000549891 UNC80Q8N2C7 3258 aa16.27■□□□□ 0.19
TROAP-211ENST00000549891 SMIM22K7EJ46 135 aa16.26■□□□□ 0.19
TROAP-211ENST00000549891 PGK2P07205 417 aa16.26■□□□□ 0.19
TROAP-211ENST00000549891 AKR1A1P14550 325 aa16.26■□□□□ 0.19
TROAP-211ENST00000549891 SHHQ15465 462 aa16.26■□□□□ 0.19
TROAP-211ENST00000549891 ZNF792Q3KQV3 632 aa16.26■□□□□ 0.19
TROAP-211ENST00000549891 SBK1Q52WX2 424 aa16.26■□□□□ 0.19
TROAP-211ENST00000549891 GIMAP6Q6P9H5 292 aa16.26■□□□□ 0.19
TROAP-211ENST00000549891 MSL3Q8N5Y2 521 aaKnown RBP16.26■□□□□ 0.19
TROAP-211ENST00000549891 BADQ92934 168 aa16.26■□□□□ 0.19
TROAP-211ENST00000549891 GPATCH3Q96I76 525 aa16.26■□□□□ 0.19
TROAP-211ENST00000549891 MKNK2Q9HBH9 465 aa16.26■□□□□ 0.19
TROAP-211ENST00000549891 ZNF214Q9UL59 606 aaPredicted RBP16.26■□□□□ 0.19
TROAP-211ENST00000549891 TACC3Q9Y6A5 838 aa16.26■□□□□ 0.19
TROAP-211ENST00000549891 CUL9Q8IWT3 2517 aa16.25■□□□□ 0.19
TROAP-211ENST00000549891 FAM161BQ96MY7 647 aa16.25■□□□□ 0.19
TROAP-211ENST00000549891 GUCD1Q96NT3 240 aa16.25■□□□□ 0.19
TROAP-211ENST00000549891 STRBPQ96SI9 672 aaKnown RBP16.25■□□□□ 0.19
TROAP-211ENST00000549891 SLF1Q9BQI6 1058 aa16.25■□□□□ 0.19
TROAP-211ENST00000549891 TEX13BQ9BXU2 312 aa16.25■□□□□ 0.19
TROAP-211ENST00000549891 ZNF287Q9HBT7 754 aa16.25■□□□□ 0.19
TROAP-211ENST00000549891 ECHDC1Q9NTX5 307 aa16.25■□□□□ 0.19
TROAP-211ENST00000549891 NYAP2Q9P242 653 aa16.25■□□□□ 0.19
TROAP-211ENST00000549891 CHGBP05060 677 aa16.24■□□□□ 0.19
TROAP-211ENST00000549891 CLTBP09497 229 aa16.24■□□□□ 0.19
TROAP-211ENST00000549891 SMAD3P84022 425 aaKnown RBP16.24■□□□□ 0.19
TROAP-211ENST00000549891 TLE2Q04725 743 aa16.24■□□□□ 0.19
TROAP-211ENST00000549891 PRPF38AQ8NAV1 312 aaKnown RBP16.24■□□□□ 0.19
TROAP-211ENST00000549891 REPS2Q8NFH8 660 aa16.24■□□□□ 0.19
TROAP-211ENST00000549891 DDX11Q96FC9 970 aa16.24■□□□□ 0.19
TROAP-211ENST00000549891 TSEN34Q9BSV6 310 aaKnown RBP16.24■□□□□ 0.19
TROAP-211ENST00000549891 RCAN3Q9UKA8 241 aa16.24■□□□□ 0.19
TROAP-211ENST00000549891 CTDP1Q9Y5B0 961 aaPredicted RBP16.24■□□□□ 0.19
TROAP-211ENST00000549891 SYNGAP1Q96PV0 1343 aa16.23■□□□□ 0.19
TROAP-211ENST00000549891 A0A1W2PQ45 241 aaPredicted RBP16.23■□□□□ 0.19
TROAP-211ENST00000549891 A0A1W2PQY0 241 aa16.23■□□□□ 0.19
TROAP-211ENST00000549891 TRIM43BA6NCK2 446 aa16.23■□□□□ 0.19
TROAP-211ENST00000549891 F5H6K3 240 aa16.23■□□□□ 0.19
TROAP-211ENST00000549891 PGK1P00558 417 aa16.23■□□□□ 0.19
TROAP-211ENST00000549891 ZFYP08048 801 aaPredicted RBP16.23■□□□□ 0.19
TROAP-211ENST00000549891 ZNF865P0CJ78 1059 aaPredicted RBP16.23■□□□□ 0.19
TROAP-211ENST00000549891 GNAT2P19087 354 aa16.23■□□□□ 0.19
TROAP-211ENST00000549891 RASA1P20936 1047 aa16.23■□□□□ 0.19
TROAP-211ENST00000549891 KLRC3Q07444 240 aa16.23■□□□□ 0.19
TROAP-211ENST00000549891 C9orf50Q5SZB4 431 aa16.23■□□□□ 0.19
TROAP-211ENST00000549891 SNRNP48Q6IEG0 339 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms