RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 FAM198AQ9UFP1 575 aa23.96■■□□□ 1.43
RITA1-201ENST00000548278 SIPA1L1O43166 1804 aa23.96■■□□□ 1.43
RITA1-201ENST00000548278 USP17L5A8MUK1 530 aa23.96■■□□□ 1.43
RITA1-201ENST00000548278 STXBP3O00186 592 aa23.96■■□□□ 1.43
RITA1-201ENST00000548278 NPM3O75607 178 aaKnown RBP23.96■■□□□ 1.43
RITA1-201ENST00000548278 KCNA3P22001 575 aa23.96■■□□□ 1.43
RITA1-201ENST00000548278 CEP57L1Q8IYX8 460 aa23.96■■□□□ 1.43
RITA1-201ENST00000548278 FAM177A1Q8N128 213 aaPredicted RBP23.96■■□□□ 1.43
RITA1-201ENST00000548278 CSRNP2Q9H175 543 aa23.96■■□□□ 1.43
RITA1-201ENST00000548278 PSME4Q14997 1843 aa23.95■■□□□ 1.43
RITA1-201ENST00000548278 M0R2N6 131 aa23.95■■□□□ 1.42
RITA1-201ENST00000548278 PTMAP06454 111 aaKnown RBP23.95■■□□□ 1.42
RITA1-201ENST00000548278 PDHBP11177 359 aa23.95■■□□□ 1.42
RITA1-201ENST00000548278 ZNF174Q15697 407 aa23.95■■□□□ 1.42
RITA1-201ENST00000548278 CCDC93Q567U6 631 aa23.95■■□□□ 1.42
RITA1-201ENST00000548278 ELOA2Q8IYF1 753 aaPredicted RBP23.95■■□□□ 1.42
RITA1-201ENST00000548278 DAGLBQ8NCG7 672 aa23.95■■□□□ 1.42
RITA1-201ENST00000548278 CCDC148Q8NFR7 591 aa23.95■■□□□ 1.42
RITA1-201ENST00000548278 TUBE1Q9UJT0 475 aa23.95■■□□□ 1.42
RITA1-201ENST00000548278 GALNT17Q6IS24 598 aa23.95■■□□□ 1.42
RITA1-201ENST00000548278 HEATR3Q7Z4Q2 680 aa23.95■■□□□ 1.42
RITA1-201ENST00000548278 DHX40Q8IX18 779 aaKnown RBP23.95■■□□□ 1.42
RITA1-201ENST00000548278 RTKN2Q8IZC4 609 aa23.95■■□□□ 1.42
RITA1-201ENST00000548278 DHX36Q9H2U1 1008 aaKnown RBP23.95■■□□□ 1.42
RITA1-201ENST00000548278 TTLL1O95922 423 aa23.94■■□□□ 1.42
RITA1-201ENST00000548278 DPEP1P16444 411 aa23.94■■□□□ 1.42
RITA1-201ENST00000548278 TCP10Q12799 353 aa23.94■■□□□ 1.42
RITA1-201ENST00000548278 DPCR1Q3MIW9 517 aa23.94■■□□□ 1.42
RITA1-201ENST00000548278 METTL16Q86W50 562 aaKnown RBP23.94■■□□□ 1.42
RITA1-201ENST00000548278 CLEC10AQ8IUN9 316 aa23.94■■□□□ 1.42
RITA1-201ENST00000548278 LRRC47Q8N1G4 583 aaKnown RBP23.94■■□□□ 1.42
RITA1-201ENST00000548278 FERMT2Q96AC1 680 aa23.94■■□□□ 1.42
RITA1-201ENST00000548278 DNAJC18Q9H819 358 aa23.94■■□□□ 1.42
RITA1-201ENST00000548278 SNHG28P0DPA3 235 aa23.93■■□□□ 1.42
RITA1-201ENST00000548278 NLRP12P59046 1061 aa23.93■■□□□ 1.42
RITA1-201ENST00000548278 ATP2C1P98194 919 aaPredicted RBP23.93■■□□□ 1.42
RITA1-201ENST00000548278 CNNM3Q8NE01 707 aa23.93■■□□□ 1.42
RITA1-201ENST00000548278 PSMD1Q99460 953 aa23.93■■□□□ 1.42
RITA1-201ENST00000548278 NAT10Q9H0A0 1025 aaKnown RBP23.93■■□□□ 1.42
RITA1-201ENST00000548278 ZKSCAN5Q9Y2L8 839 aa23.93■■□□□ 1.42
RITA1-201ENST00000548278 DDTLA6NHG4 134 aaPredicted RBP23.93■■□□□ 1.42
RITA1-201ENST00000548278 SLURP2P0DP57 97 aa23.93■■□□□ 1.42
RITA1-201ENST00000548278 ZRSR1Q15695 479 aaKnown RBP23.93■■□□□ 1.42
RITA1-201ENST00000548278 USP49Q70CQ1 688 aa23.93■■□□□ 1.42
RITA1-201ENST00000548278 SH3BP5LQ7L8J4 393 aa23.93■■□□□ 1.42
RITA1-201ENST00000548278 CLIP2Q9UDT6 1046 aa23.93■■□□□ 1.42
RITA1-201ENST00000548278 GOLGA6L19H0YKK7 550 aa23.92■■□□□ 1.42
RITA1-201ENST00000548278 EIF6P56537 245 aaKnown RBP23.92■■□□□ 1.42
RITA1-201ENST00000548278 PNOCQ13519 176 aa23.92■■□□□ 1.42
RITA1-201ENST00000548278 RRP36Q96EU6 259 aaKnown RBP23.92■■□□□ 1.42
RITA1-201ENST00000548278 RIOX1Q9H6W3 641 aa23.92■■□□□ 1.42
RITA1-201ENST00000548278 KIF13BQ9NQT8 1826 aa23.92■■□□□ 1.42
RITA1-201ENST00000548278 BIN1O00499 593 aa23.91■■□□□ 1.42
RITA1-201ENST00000548278 POLR2DO15514 142 aaKnown RBP23.91■■□□□ 1.42
RITA1-201ENST00000548278 MDM2Q00987 491 aaPredicted RBP23.91■■□□□ 1.42
RITA1-201ENST00000548278 PTGDRQ13258 359 aa23.91■■□□□ 1.42
RITA1-201ENST00000548278 RASGRP4Q8TDF6 673 aa23.91■■□□□ 1.42
RITA1-201ENST00000548278 CCDC17Q96LX7 622 aa23.91■■□□□ 1.42
RITA1-201ENST00000548278 PI4KBQ9UBF8 816 aa23.91■■□□□ 1.42
RITA1-201ENST00000548278 PCDHA6Q9UN73 950 aa23.91■■□□□ 1.42
RITA1-201ENST00000548278 PCDHA8Q9Y5H6 950 aa23.91■■□□□ 1.42
RITA1-201ENST00000548278 MSNP26038 577 aaKnown RBP23.91■■□□□ 1.42
RITA1-201ENST00000548278 CFAP100Q494V2 611 aa23.91■■□□□ 1.42
RITA1-201ENST00000548278 ASPRV1Q53RT3 343 aa23.91■■□□□ 1.42
RITA1-201ENST00000548278 PLA2G4DQ86XP0 818 aa23.91■■□□□ 1.42
RITA1-201ENST00000548278 BPIFA3Q9BQP9 254 aa23.91■■□□□ 1.42
RITA1-201ENST00000548278 FOXP4Q8IVH2 680 aaPredicted RBP23.9■■□□□ 1.42
RITA1-201ENST00000548278 UBA5Q9GZZ9 404 aa23.9■■□□□ 1.42
RITA1-201ENST00000548278 ZMYND12Q9H0C1 365 aa23.9■■□□□ 1.42
RITA1-201ENST00000548278 FRMPD2Q68DX3 1309 aaPredicted RBP23.9■■□□□ 1.42
RITA1-201ENST00000548278 BECN2A8MW95 431 aa23.9■■□□□ 1.42
RITA1-201ENST00000548278 ZNF75DP51815 510 aa23.9■■□□□ 1.42
RITA1-201ENST00000548278 PIGSQ96S52 555 aa23.9■■□□□ 1.42
RITA1-201ENST00000548278 TDRD3Q9H7E2 651 aaKnown RBP23.9■■□□□ 1.42
RITA1-201ENST00000548278 GOLGB1Q14789 3259 aaKnown RBP23.9■■□□□ 1.42
RITA1-201ENST00000548278 MYH4Q9Y623 1939 aa23.89■■□□□ 1.42
RITA1-201ENST00000548278 MPHOSPH10O00566 681 aaKnown RBP23.89■■□□□ 1.41
RITA1-201ENST00000548278 MCM7P33993 719 aa23.89■■□□□ 1.41
RITA1-201ENST00000548278 SARM1Q6SZW1 724 aa23.89■■□□□ 1.41
RITA1-201ENST00000548278 HOMER1Q86YM7 354 aa23.89■■□□□ 1.41
RITA1-201ENST00000548278 PRMT6Q96LA8 375 aaPredicted RBP23.89■■□□□ 1.41
RITA1-201ENST00000548278 VAT1LQ9HCJ6 419 aa23.89■■□□□ 1.41
RITA1-201ENST00000548278 SEC63Q9UGP8 760 aaKnown RBP23.89■■□□□ 1.41
RITA1-201ENST00000548278 SERTAD1Q9UHV2 236 aa23.89■■□□□ 1.41
RITA1-201ENST00000548278 COL4A5P29400 1685 aa23.89■■□□□ 1.41
RITA1-201ENST00000548278 FOXN1O15353 648 aa23.88■■□□□ 1.41
RITA1-201ENST00000548278 ACTN4O43707 911 aaKnown RBP23.88■■□□□ 1.41
RITA1-201ENST00000548278 AOPEPQ8N6M6 819 aa23.88■■□□□ 1.41
RITA1-201ENST00000548278 CCDC12Q8WUD4 166 aaPredicted RBP23.88■■□□□ 1.41
RITA1-201ENST00000548278 EPSTI1Q96J88 318 aa23.88■■□□□ 1.41
RITA1-201ENST00000548278 TRIM5Q9C035 493 aa23.88■■□□□ 1.41
RITA1-201ENST00000548278 ZNF277Q9NRM2 450 aaPredicted RBP23.88■■□□□ 1.41
RITA1-201ENST00000548278 CCDC194A0A1B0GVG4 234 aa23.88■■□□□ 1.41
RITA1-201ENST00000548278 NAPAP54920 295 aa23.88■■□□□ 1.41
RITA1-201ENST00000548278 ZNF543Q08ER8 600 aa23.88■■□□□ 1.41
RITA1-201ENST00000548278 RSBN1LQ6PCB5 846 aaPredicted RBP23.88■■□□□ 1.41
RITA1-201ENST00000548278 ZSCAN29Q8IWY8 852 aaPredicted RBP23.88■■□□□ 1.41
RITA1-201ENST00000548278 C4orf32Q8N8J7 132 aa23.88■■□□□ 1.41
RITA1-201ENST00000548278 SYMPKQ92797 1274 aaKnown RBP23.88■■□□□ 1.41
RITA1-201ENST00000548278 PCDHA5Q9Y5H7 936 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms