RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 UBE3CQ15386 1083 aa14.29□□□□□ -0.12
GABPB1-206ENST00000543881 PRAMEF19Q5SWL8 479 aa14.29□□□□□ -0.12
GABPB1-206ENST00000543881 C1orf53Q5VUE5 145 aa14.29□□□□□ -0.12
GABPB1-206ENST00000543881 SYMPKQ92797 1274 aaKnown RBP14.29□□□□□ -0.12
GABPB1-206ENST00000543881 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.29□□□□□ -0.12
GABPB1-206ENST00000543881 SPATC1LQ9H0A9 340 aa14.29□□□□□ -0.12
GABPB1-206ENST00000543881 HOXC10Q9NYD6 342 aa14.29□□□□□ -0.12
GABPB1-206ENST00000543881 CDH23Q9H251 3354 aa14.28□□□□□ -0.12
GABPB1-206ENST00000543881 TSHZ3Q63HK5 1081 aa14.28□□□□□ -0.12
GABPB1-206ENST00000543881 SHCBP1Q8NEM2 672 aa14.28□□□□□ -0.12
GABPB1-206ENST00000543881 PUS7LQ9H0K6 701 aaKnown RBP14.28□□□□□ -0.12
GABPB1-206ENST00000543881 ATP8A2Q9NTI2 1148 aa14.28□□□□□ -0.12
GABPB1-206ENST00000543881 ECHDC1Q9NTX5 307 aa14.28□□□□□ -0.12
GABPB1-206ENST00000543881 SLC5A4Q9NY91 659 aa14.28□□□□□ -0.12
GABPB1-206ENST00000543881 BAZ2AQ9UIF9 1905 aaKnown RBP14.28□□□□□ -0.12
GABPB1-206ENST00000543881 MYH7P12883 1935 aa14.27□□□□□ -0.12
GABPB1-206ENST00000543881 TMEM265A0A087WTH1 108 aa14.27□□□□□ -0.12
GABPB1-206ENST00000543881 MPHOSPH10O00566 681 aaKnown RBP14.27□□□□□ -0.12
GABPB1-206ENST00000543881 ITGB8P26012 769 aa14.27□□□□□ -0.12
GABPB1-206ENST00000543881 TLE2Q04725 743 aa14.27□□□□□ -0.12
GABPB1-206ENST00000543881 FAM47AQ5JRC9 791 aa14.27□□□□□ -0.12
GABPB1-206ENST00000543881 KIAA1755Q5JYT7 1200 aa14.27□□□□□ -0.12
GABPB1-206ENST00000543881 C12orf60Q5U649 245 aa14.27□□□□□ -0.12
GABPB1-206ENST00000543881 CLEC10AQ8IUN9 316 aa14.27□□□□□ -0.12
GABPB1-206ENST00000543881 SIAH1Q8IUQ4 282 aa14.27□□□□□ -0.12
GABPB1-206ENST00000543881 RNPC3Q96LT9 517 aaKnown RBP14.27□□□□□ -0.12
GABPB1-206ENST00000543881 TANGO6Q9C0B7 1094 aa14.27□□□□□ -0.12
GABPB1-206ENST00000543881 PCDHB15Q9Y5E8 787 aa14.27□□□□□ -0.12
GABPB1-206ENST00000543881 TACC3Q9Y6A5 838 aa14.27□□□□□ -0.12
GABPB1-206ENST00000543881 A0A0G2JMZ2 1700 aa14.27□□□□□ -0.13
GABPB1-206ENST00000543881 USP17L12C9JPN9 530 aa14.26□□□□□ -0.13
GABPB1-206ENST00000543881 USP17L21D6R901 530 aa14.26□□□□□ -0.13
GABPB1-206ENST00000543881 AKR1B1P15121 316 aa14.26□□□□□ -0.13
GABPB1-206ENST00000543881 PLS1Q14651 629 aa14.26□□□□□ -0.13
GABPB1-206ENST00000543881 MROH8Q9H579 483 aa14.26□□□□□ -0.13
GABPB1-206ENST00000543881 SWAP70Q9UH65 585 aa14.26□□□□□ -0.13
GABPB1-206ENST00000543881 SLC4A4Q9Y6R1 1079 aa14.26□□□□□ -0.13
GABPB1-206ENST00000543881 SMCHD1A6NHR9 2005 aa14.26□□□□□ -0.13
GABPB1-206ENST00000543881 CLTBP09497 229 aa14.25□□□□□ -0.13
GABPB1-206ENST00000543881 CDK8P49336 464 aa14.25□□□□□ -0.13
GABPB1-206ENST00000543881 EPHB4P54760 987 aa14.25□□□□□ -0.13
GABPB1-206ENST00000543881 CTR9Q6PD62 1173 aa14.25□□□□□ -0.13
GABPB1-206ENST00000543881 TMEM179Q6ZVK1 233 aa14.25□□□□□ -0.13
GABPB1-206ENST00000543881 NCAPG2Q86XI2 1143 aa14.25□□□□□ -0.13
GABPB1-206ENST00000543881 ABRAQ8N0Z2 381 aa14.25□□□□□ -0.13
GABPB1-206ENST00000543881 MB21D1Q8N884 522 aa14.25□□□□□ -0.13
GABPB1-206ENST00000543881 MAML3Q96JK9 1138 aa14.25□□□□□ -0.13
GABPB1-206ENST00000543881 PHF24Q9UPV7 400 aa14.25□□□□□ -0.13
GABPB1-206ENST00000543881 ZNFX1Q9P2E3 1918 aaKnown RBP14.25□□□□□ -0.13
GABPB1-206ENST00000543881 RAG1P15918 1043 aa14.25□□□□□ -0.13
GABPB1-206ENST00000543881 GRIN2CQ14957 1233 aa14.25□□□□□ -0.13
GABPB1-206ENST00000543881 ZSCAN25Q6NSZ9 544 aa14.25□□□□□ -0.13
GABPB1-206ENST00000543881 C16orf86Q6ZW13 317 aa14.25□□□□□ -0.13
GABPB1-206ENST00000543881 KBTBD3Q8NAB2 608 aa14.25□□□□□ -0.13
GABPB1-206ENST00000543881 STRBPQ96SI9 672 aaKnown RBP14.25□□□□□ -0.13
GABPB1-206ENST00000543881 XPNPEP3Q9NQH7 507 aa14.25□□□□□ -0.13
GABPB1-206ENST00000543881 KIAA0355O15063 1070 aa14.24□□□□□ -0.13
GABPB1-206ENST00000543881 RARBP10826 455 aa14.24□□□□□ -0.13
GABPB1-206ENST00000543881 FCER1AP12319 257 aa14.24□□□□□ -0.13
GABPB1-206ENST00000543881 DSG3P32926 999 aa14.24□□□□□ -0.13
GABPB1-206ENST00000543881 TJAP1Q5JTD0 557 aa14.24□□□□□ -0.13
GABPB1-206ENST00000543881 OSBP2Q969R2 916 aa14.24□□□□□ -0.13
GABPB1-206ENST00000543881 GSG1L2A8MUP6 293 aa14.23□□□□□ -0.13
GABPB1-206ENST00000543881 PQBP1O60828 265 aaKnown RBP14.23□□□□□ -0.13
GABPB1-206ENST00000543881 FLOT1O75955 427 aa14.23□□□□□ -0.13
GABPB1-206ENST00000543881 PGK1P00558 417 aa14.23□□□□□ -0.13
GABPB1-206ENST00000543881 DNAJB2P25686 324 aa14.23□□□□□ -0.13
GABPB1-206ENST00000543881 ICA1Q05084 483 aa14.23□□□□□ -0.13
GABPB1-206ENST00000543881 FPGSQ05932 587 aa14.23□□□□□ -0.13
GABPB1-206ENST00000543881 RNF180Q86T96 592 aa14.23□□□□□ -0.13
GABPB1-206ENST00000543881 POTEDQ86YR6 584 aa14.23□□□□□ -0.13
GABPB1-206ENST00000543881 USP38Q8NB14 1042 aa14.23□□□□□ -0.13
GABPB1-206ENST00000543881 OTUD7AQ8TE49 926 aaPredicted RBP14.23□□□□□ -0.13
GABPB1-206ENST00000543881 ATG4CQ96DT6 458 aa14.23□□□□□ -0.13
GABPB1-206ENST00000543881 CCDC17Q96LX7 622 aa14.23□□□□□ -0.13
GABPB1-206ENST00000543881 NRBP1Q9UHY1 535 aa14.23□□□□□ -0.13
GABPB1-206ENST00000543881 TMX2Q9Y320 296 aa14.23□□□□□ -0.13
GABPB1-206ENST00000543881 MYH8P13535 1937 aa14.23□□□□□ -0.13
GABPB1-206ENST00000543881 TTC28Q96AY4 2481 aa14.23□□□□□ -0.13
GABPB1-206ENST00000543881 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.22□□□□□ -0.13
GABPB1-206ENST00000543881 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.22□□□□□ -0.13
GABPB1-206ENST00000543881 A0A1W2PQ45 241 aaPredicted RBP14.22□□□□□ -0.13
GABPB1-206ENST00000543881 A0A1W2PQY0 241 aa14.22□□□□□ -0.13
GABPB1-206ENST00000543881 RRP1P56182 461 aaKnown RBP14.22□□□□□ -0.13
GABPB1-206ENST00000543881 SAMD1Q6SPF0 538 aaPredicted RBP14.22□□□□□ -0.13
GABPB1-206ENST00000543881 SPICE1Q8N0Z3 855 aa14.22□□□□□ -0.13
GABPB1-206ENST00000543881 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.22□□□□□ -0.13
GABPB1-206ENST00000543881 TMEM39AQ9NV64 488 aa14.22□□□□□ -0.13
GABPB1-206ENST00000543881 TNFRSF10AO00220 468 aa14.21□□□□□ -0.13
GABPB1-206ENST00000543881 RNF113AO15541 343 aaKnown RBP14.21□□□□□ -0.13
GABPB1-206ENST00000543881 EEF2P13639 858 aaKnown RBP14.21□□□□□ -0.13
GABPB1-206ENST00000543881 COL9A1P20849 921 aa14.21□□□□□ -0.13
GABPB1-206ENST00000543881 AMOTL1Q8IY63 956 aa14.21□□□□□ -0.13
GABPB1-206ENST00000543881 PI4K2BQ8TCG2 481 aa14.21□□□□□ -0.13
GABPB1-206ENST00000543881 APPBP2Q92624 585 aa14.21□□□□□ -0.13
GABPB1-206ENST00000543881 DDRGK1Q96HY6 314 aa14.21□□□□□ -0.13
GABPB1-206ENST00000543881 GPATCH3Q96I76 525 aa14.21□□□□□ -0.13
GABPB1-206ENST00000543881 MMP19Q99542 508 aa14.21□□□□□ -0.13
GABPB1-206ENST00000543881 ZNF576Q9H609 170 aa14.21□□□□□ -0.13
GABPB1-206ENST00000543881 VCPKMTQ9H867 229 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms