RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 CNBD1Q8NA66 436 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 PNMA1Q8ND90 353 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 CERKQ8TCT0 537 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 IL17RBQ9NRM6 502 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 PCDHA4Q9UN74 947 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 UBR3Q6ZT12 1888 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 LRRC37AA6NMS7 1700 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 GOLGA6L9A6NEM1 432 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 M0R2N6 131 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 ZSCAN12O43309 604 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 STX10O60499 249 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 SLU7O95391 586 aaKnown RBP7.44□□□□□ -1.22
PTPRO-208ENST00000542557 LONP1P36776 959 aaKnown RBP7.44□□□□□ -1.22
PTPRO-208ENST00000542557 ETF1P62495 437 aaKnown RBP7.44□□□□□ -1.22
PTPRO-208ENST00000542557 NFIXQ14938 502 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 NR1I3Q14994 352 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 CDKAL1Q5VV42 579 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 PIK3AP1Q6ZUJ8 805 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 TRMT44Q8IYL2 757 aaKnown RBP7.44□□□□□ -1.22
PTPRO-208ENST00000542557 BLIDQ8IZY5 108 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 CCDC148Q8NFR7 591 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 LZTS2Q9BRK4 669 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 ANKIB1Q9P2G1 1089 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 SNED1Q8TER0 1413 aa7.43□□□□□ -1.22
PTPRO-208ENST00000542557 VWA3AA6NCI4 1184 aa7.43□□□□□ -1.22
PTPRO-208ENST00000542557 NOM1Q5C9Z4 860 aaKnown RBP7.43□□□□□ -1.22
PTPRO-208ENST00000542557 PDXDC2PQ6P474 469 aa7.43□□□□□ -1.22
PTPRO-208ENST00000542557 APTXQ7Z2E3 356 aaKnown RBP7.43□□□□□ -1.22
PTPRO-208ENST00000542557 CCDC24Q8N4L8 307 aa7.43□□□□□ -1.22
PTPRO-208ENST00000542557 TC2NQ8N9U0 490 aa7.43□□□□□ -1.22
PTPRO-208ENST00000542557 SH3RF3Q8TEJ3 882 aaPredicted RBP7.43□□□□□ -1.22
PTPRO-208ENST00000542557 CTAGE1Q96RT6 745 aa7.43□□□□□ -1.22
PTPRO-208ENST00000542557 FEZ1Q99689 392 aa7.43□□□□□ -1.22
PTPRO-208ENST00000542557 RTFDC1Q9BY42 306 aaPredicted RBP7.43□□□□□ -1.22
PTPRO-208ENST00000542557 ZNF287Q9HBT7 754 aa7.43□□□□□ -1.22
PTPRO-208ENST00000542557 USP21Q9UK80 565 aa7.43□□□□□ -1.22
PTPRO-208ENST00000542557 ZNF215Q9UL58 517 aaPredicted RBP7.43□□□□□ -1.22
PTPRO-208ENST00000542557 LTBP1Q14766 1721 aa7.43□□□□□ -1.22
PTPRO-208ENST00000542557 NPHP1O15259 732 aa7.43□□□□□ -1.22
PTPRO-208ENST00000542557 GTPBP6O43824 516 aaPredicted RBP7.43□□□□□ -1.22
PTPRO-208ENST00000542557 SEMA3FQ13275 785 aa7.43□□□□□ -1.22
PTPRO-208ENST00000542557 CRY2Q49AN0 593 aa7.43□□□□□ -1.22
PTPRO-208ENST00000542557 CCDC93Q567U6 631 aa7.43□□□□□ -1.22
PTPRO-208ENST00000542557 PPP4R3BQ5MIZ7 849 aa7.43□□□□□ -1.22
PTPRO-208ENST00000542557 REXO1L1PQ8IX06 675 aa7.43□□□□□ -1.22
PTPRO-208ENST00000542557 C4orf32Q8N8J7 132 aa7.43□□□□□ -1.22
PTPRO-208ENST00000542557 BAG1Q99933 345 aaPredicted RBP7.43□□□□□ -1.22
PTPRO-208ENST00000542557 SAMSN1Q9NSI8 373 aaKnown RBP7.43□□□□□ -1.22
PTPRO-208ENST00000542557 MAD2L2Q9UI95 211 aa7.43□□□□□ -1.22
PTPRO-208ENST00000542557 FOCADQ5VW36 1801 aa7.43□□□□□ -1.22
PTPRO-208ENST00000542557 PPP1R3GB7ZBB8 358 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 TSPY3P0CV98 308 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 TSPY8P0CW00 308 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 IL1R1P14778 569 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 CD44P16070 742 aaKnown RBP7.42□□□□□ -1.22
PTPRO-208ENST00000542557 ATP2B4P23634 1241 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 TXLNAP40222 546 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 PBX1P40424 430 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 AFMP43652 599 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 PRR5LQ6MZQ0 368 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 SYT10Q6XYQ8 523 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 MKNK2Q9HBH9 465 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 RMND1Q9NWS8 449 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 ITIH6Q6UXX5 1313 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 FAM205AQ6ZU69 1335 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 PALM3A6NDB9 673 aaPredicted RBP7.42□□□□□ -1.22
PTPRO-208ENST00000542557 LAD1O00515 517 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 PLCG2P16885 1265 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 IL17AQ16552 155 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 TRIM65Q6PJ69 517 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 ZNF444Q8N0Y2 327 aaPredicted RBP7.42□□□□□ -1.22
PTPRO-208ENST00000542557 ZNF397Q8NF99 534 aaPredicted RBP7.42□□□□□ -1.22
PTPRO-208ENST00000542557 DYNLL2Q96FJ2 89 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 PANX2Q96RD6 677 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 SPZ1Q9BXG8 430 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 SRRTQ9BXP5 876 aaKnown RBP7.42□□□□□ -1.22
PTPRO-208ENST00000542557 BARHL2Q9NY43 387 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 ADD3Q9UEY8 706 aaKnown RBP7.42□□□□□ -1.22
PTPRO-208ENST00000542557 JAG2Q9Y219 1238 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 PPP2R2CQ9Y2T4 447 aa7.42□□□□□ -1.22
PTPRO-208ENST00000542557 GPR75-ASB3A0A0A6YYF3 556 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 MYL1P05976 194 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 VEGFAP15692 232 aaPredicted RBP7.41□□□□□ -1.22
PTPRO-208ENST00000542557 RASA1P20936 1047 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 MCM7P33993 719 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 SPAG1Q07617 926 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 DIXDC1Q155Q3 683 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 FAM196AQ6ZSG2 479 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 C16orf86Q6ZW13 317 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 HOMER1Q86YM7 354 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 CCDC125Q86Z20 511 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 RPGRQ92834 1020 aaKnown RBP7.41□□□□□ -1.22
PTPRO-208ENST00000542557 FAM163AQ96GL9 167 aaPredicted RBP7.41□□□□□ -1.22
PTPRO-208ENST00000542557 NAA15Q9BXJ9 866 aaKnown RBP7.41□□□□□ -1.22
PTPRO-208ENST00000542557 CD209Q9NNX6 404 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 RWDD2AQ9UIY3 292 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 C10orf71Q711Q0 1435 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 PLIN4Q96Q06 1357 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 GAKO14976 1311 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 CCDC194A0A1B0GVG4 234 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 813.8 ms