RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 SSBP4Q9BWG4 385 aaPredicted RBP11.87□□□□□ -0.51
MRPS35-204ENST00000542199 ACSS3Q9H6R3 686 aa11.87□□□□□ -0.51
MRPS35-204ENST00000542199 TBX22Q9Y458 520 aa11.87□□□□□ -0.51
MRPS35-204ENST00000542199 FAM135BQ49AJ0 1406 aa11.86□□□□□ -0.51
MRPS35-204ENST00000542199 ADAMTS13Q76LX8 1427 aa11.86□□□□□ -0.51
MRPS35-204ENST00000542199 XIRP1Q702N8 1843 aaKnown RBP11.86□□□□□ -0.51
MRPS35-204ENST00000542199 SSBP05455 408 aaKnown RBP eCLIP11.86□□□□□ -0.51
MRPS35-204ENST00000542199 USP11P51784 963 aa11.86□□□□□ -0.51
MRPS35-204ENST00000542199 PDE4BQ07343 736 aa11.86□□□□□ -0.51
MRPS35-204ENST00000542199 NKG7Q16617 165 aa11.86□□□□□ -0.51
MRPS35-204ENST00000542199 ACSF2Q96CM8 615 aaPredicted RBP11.86□□□□□ -0.51
MRPS35-204ENST00000542199 SHDQ96IW2 340 aa11.86□□□□□ -0.51
MRPS35-204ENST00000542199 DRC1Q96MC2 740 aa11.86□□□□□ -0.51
MRPS35-204ENST00000542199 BMP3P12645 472 aa11.85□□□□□ -0.51
MRPS35-204ENST00000542199 ATP2B1P20020 1258 aa11.85□□□□□ -0.51
MRPS35-204ENST00000542199 SMYD4Q8IYR2 804 aaPredicted RBP11.85□□□□□ -0.51
MRPS35-204ENST00000542199 CPLX3Q8WVH0 158 aa11.85□□□□□ -0.51
MRPS35-204ENST00000542199 ANAPC16Q96DE5 110 aa11.85□□□□□ -0.51
MRPS35-204ENST00000542199 MYRFLQ96LU7 910 aa11.85□□□□□ -0.51
MRPS35-204ENST00000542199 LGR6Q9HBX8 967 aa11.85□□□□□ -0.51
MRPS35-204ENST00000542199 TJP2Q9UDY2 1190 aa11.85□□□□□ -0.51
MRPS35-204ENST00000542199 KLHL3Q9UH77 587 aa11.85□□□□□ -0.51
MRPS35-204ENST00000542199 DAGLAQ9Y4D2 1042 aa11.85□□□□□ -0.51
MRPS35-204ENST00000542199 HFM1A2PYH4 1435 aa11.85□□□□□ -0.51
MRPS35-204ENST00000542199 MED1Q15648 1581 aaPredicted RBP11.84□□□□□ -0.51
MRPS35-204ENST00000542199 MYO5BQ9ULV0 1848 aa11.84□□□□□ -0.51
MRPS35-204ENST00000542199 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.84□□□□□ -0.51
MRPS35-204ENST00000542199 GTF2F1P35269 517 aaKnown RBP eCLIP11.84□□□□□ -0.51
MRPS35-204ENST00000542199 UVSSAQ2YD98 709 aa11.84□□□□□ -0.51
MRPS35-204ENST00000542199 ZNF507Q8TCN5 953 aa11.84□□□□□ -0.51
MRPS35-204ENST00000542199 SEMA6CQ9H3T2 930 aa11.84□□□□□ -0.51
MRPS35-204ENST00000542199 ZNF408Q9H9D4 720 aa11.84□□□□□ -0.51
MRPS35-204ENST00000542199 STRIP2Q9ULQ0 834 aa11.84□□□□□ -0.51
MRPS35-204ENST00000542199 PIK3R4Q99570 1358 aa11.83□□□□□ -0.52
MRPS35-204ENST00000542199 DYNC1LI2O43237 492 aaPredicted RBP11.83□□□□□ -0.52
MRPS35-204ENST00000542199 NFICP08651 508 aa11.83□□□□□ -0.52
MRPS35-204ENST00000542199 TMEM201Q5SNT2 666 aa11.83□□□□□ -0.52
MRPS35-204ENST00000542199 OVOS1Q6IE37 1185 aa11.83□□□□□ -0.52
MRPS35-204ENST00000542199 LSRQ86X29 649 aaPredicted RBP11.83□□□□□ -0.52
MRPS35-204ENST00000542199 FAM169BQ8N8A8 192 aa11.83□□□□□ -0.52
MRPS35-204ENST00000542199 DPH2Q9BQC3 489 aaPredicted RBP11.83□□□□□ -0.52
MRPS35-204ENST00000542199 ADAM30Q9UKF2 790 aa11.83□□□□□ -0.52
MRPS35-204ENST00000542199 UPK3BL1B0FP48 263 aa11.82□□□□□ -0.52
MRPS35-204ENST00000542199 UPK3BL2E5RIL1 263 aa11.82□□□□□ -0.52
MRPS35-204ENST00000542199 ETFBP38117 255 aa11.82□□□□□ -0.52
MRPS35-204ENST00000542199 EIF6P56537 245 aaKnown RBP11.82□□□□□ -0.52
MRPS35-204ENST00000542199 PLA2G4EQ3MJ16 856 aa11.82□□□□□ -0.52
MRPS35-204ENST00000542199 FAM20CQ8IXL6 584 aa11.82□□□□□ -0.52
MRPS35-204ENST00000542199 TMEM87BQ96K49 555 aa11.82□□□□□ -0.52
MRPS35-204ENST00000542199 SSU72Q9NP77 194 aaKnown RBP11.82□□□□□ -0.52
MRPS35-204ENST00000542199 NCOA3Q9Y6Q9 1424 aa11.82□□□□□ -0.52
MRPS35-204ENST00000542199 DIP2AQ14689 1571 aa11.82□□□□□ -0.52
MRPS35-204ENST00000542199 MSH6P52701 1360 aa11.81□□□□□ -0.52
MRPS35-204ENST00000542199 CHURC1-FNTBB4DL54 471 aa11.81□□□□□ -0.52
MRPS35-204ENST00000542199 GDF11O95390 407 aa11.81□□□□□ -0.52
MRPS35-204ENST00000542199 MAP4P27816 1152 aaKnown RBP11.81□□□□□ -0.52
MRPS35-204ENST00000542199 RXRBP28702 533 aa11.81□□□□□ -0.52
MRPS35-204ENST00000542199 GATA4P43694 442 aa11.81□□□□□ -0.52
MRPS35-204ENST00000542199 GIPRP48546 466 aa11.81□□□□□ -0.52
MRPS35-204ENST00000542199 SLBPQ14493 270 aaKnown RBP eCLIP11.81□□□□□ -0.52
MRPS35-204ENST00000542199 RUFY4Q6ZNE9 571 aa11.81□□□□□ -0.52
MRPS35-204ENST00000542199 CDC37L1Q7L3B6 337 aa11.81□□□□□ -0.52
MRPS35-204ENST00000542199 HID1Q8IV36 788 aa11.81□□□□□ -0.52
MRPS35-204ENST00000542199 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.81□□□□□ -0.52
MRPS35-204ENST00000542199 TRPM2O94759 1503 aa11.81□□□□□ -0.52
MRPS35-204ENST00000542199 SLC22A31A6NKX4 558 aa11.8□□□□□ -0.52
MRPS35-204ENST00000542199 IMPDH2P12268 514 aa11.8□□□□□ -0.52
MRPS35-204ENST00000542199 MCATQ8IVS2 390 aaKnown RBP11.8□□□□□ -0.52
MRPS35-204ENST00000542199 FAM13CQ8NE31 585 aa11.8□□□□□ -0.52
MRPS35-204ENST00000542199 TMEM40Q8WWA1 233 aa11.8□□□□□ -0.52
MRPS35-204ENST00000542199 EZH1Q92800 747 aaPredicted RBP11.8□□□□□ -0.52
MRPS35-204ENST00000542199 KCNF1Q9H3M0 494 aa11.8□□□□□ -0.52
MRPS35-204ENST00000542199 GMIPQ9P107 970 aa11.8□□□□□ -0.52
MRPS35-204ENST00000542199 CHD2O14647 1828 aaKnown RBP11.8□□□□□ -0.52
MRPS35-204ENST00000542199 SPHKAPQ2M3C7 1700 aa11.8□□□□□ -0.52
MRPS35-204ENST00000542199 MEIS3P2A8K0S8 358 aa11.79□□□□□ -0.52
MRPS35-204ENST00000542199 TP53INP1Q96A56 240 aa11.79□□□□□ -0.52
MRPS35-204ENST00000542199 CRBNQ96SW2 442 aa11.79□□□□□ -0.52
MRPS35-204ENST00000542199 DNAJC2Q99543 621 aaKnown RBP11.79□□□□□ -0.52
MRPS35-204ENST00000542199 SETBP1Q9Y6X0 1596 aa11.79□□□□□ -0.52
MRPS35-204ENST00000542199 PTPRUQ92729 1446 aa11.78□□□□□ -0.52
MRPS35-204ENST00000542199 STK10O94804 968 aaKnown RBP11.78□□□□□ -0.52
MRPS35-204ENST00000542199 ARSHQ5FYA8 562 aa11.78□□□□□ -0.52
MRPS35-204ENST00000542199 PRAMEF13Q5VWM6 474 aa11.78□□□□□ -0.52
MRPS35-204ENST00000542199 MRPL41Q8IXM3 137 aaKnown RBP11.78□□□□□ -0.52
MRPS35-204ENST00000542199 RBBP8NLQ8NC74 664 aaPredicted RBP11.78□□□□□ -0.52
MRPS35-204ENST00000542199 PCOLCE2Q9UKZ9 415 aa11.78□□□□□ -0.52
MRPS35-204ENST00000542199 BEND4Q6ZU67 534 aa11.77□□□□□ -0.53
MRPS35-204ENST00000542199 ARMCX6Q7L4S7 300 aa11.77□□□□□ -0.53
MRPS35-204ENST00000542199 TMEM151AQ8N4L1 468 aa11.77□□□□□ -0.53
MRPS35-204ENST00000542199 KCT2Q8NC54 265 aa11.77□□□□□ -0.53
MRPS35-204ENST00000542199 XAGE3Q8WTP9 111 aa11.77□□□□□ -0.53
MRPS35-204ENST00000542199 ATG4CQ96DT6 458 aa11.77□□□□□ -0.53
MRPS35-204ENST00000542199 YIPF2Q9BWQ6 316 aa11.77□□□□□ -0.53
MRPS35-204ENST00000542199 TPSG1Q9NRR2 321 aa11.77□□□□□ -0.53
MRPS35-204ENST00000542199 CLTCL1P53675 1640 aa11.77□□□□□ -0.53
MRPS35-204ENST00000542199 NRXN3Q9Y4C0 1643 aa11.77□□□□□ -0.53
MRPS35-204ENST00000542199 ROBO1Q9Y6N7 1651 aa11.76□□□□□ -0.53
MRPS35-204ENST00000542199 FAM95CA0A1B0GW59 222 aa11.76□□□□□ -0.53
MRPS35-204ENST00000542199 SMAD7O15105 426 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms