RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 SLFN13Q68D06 897 aa22.82■■□□□ 1.24
DDX55-207ENST00000540763 RASEFQ8IZ41 740 aa22.82■■□□□ 1.24
DDX55-207ENST00000540763 FKTNO75072 461 aa22.81■■□□□ 1.24
DDX55-207ENST00000540763 ANTXR2P58335 489 aa22.81■■□□□ 1.24
DDX55-207ENST00000540763 SP3Q02447 781 aa22.81■■□□□ 1.24
DDX55-207ENST00000540763 FAM83BQ5T0W9 1011 aa22.81■■□□□ 1.24
DDX55-207ENST00000540763 DCAF4Q8WV16 495 aa22.81■■□□□ 1.24
DDX55-207ENST00000540763 TMEM87BQ96K49 555 aa22.81■■□□□ 1.24
DDX55-207ENST00000540763 NEK1Q96PY6 1258 aa22.81■■□□□ 1.24
DDX55-207ENST00000540763 P2RX7Q99572 595 aaKnown RBP22.81■■□□□ 1.24
DDX55-207ENST00000540763 HOXC10Q9NYD6 342 aa22.81■■□□□ 1.24
DDX55-207ENST00000540763 MORF4L1Q9UBU8 362 aa22.81■■□□□ 1.24
DDX55-207ENST00000540763 SPDYE16A6NNV3 312 aaPredicted RBP22.8■■□□□ 1.24
DDX55-207ENST00000540763 RAD21O60216 631 aa22.8■■□□□ 1.24
DDX55-207ENST00000540763 SLC1A4P43007 532 aa22.8■■□□□ 1.24
DDX55-207ENST00000540763 IFIT1BQ5T764 474 aaKnown RBP22.8■■□□□ 1.24
DDX55-207ENST00000540763 MB21D1Q8N884 522 aa22.8■■□□□ 1.24
DDX55-207ENST00000540763 ZNF296Q8WUU4 475 aaPredicted RBP22.8■■□□□ 1.24
DDX55-207ENST00000540763 KAT14Q9H8E8 782 aa22.8■■□□□ 1.24
DDX55-207ENST00000540763 SNX14Q9Y5W7 946 aa22.8■■□□□ 1.24
DDX55-207ENST00000540763 IFIT3O14879 490 aaKnown RBP22.79■■□□□ 1.24
DDX55-207ENST00000540763 PLA2G6O60733 806 aa22.79■■□□□ 1.24
DDX55-207ENST00000540763 FLOT1O75955 427 aa22.79■■□□□ 1.24
DDX55-207ENST00000540763 SNHG28P0DPA3 235 aa22.79■■□□□ 1.24
DDX55-207ENST00000540763 BMP3P12645 472 aa22.79■■□□□ 1.24
DDX55-207ENST00000540763 DSG3P32926 999 aa22.79■■□□□ 1.24
DDX55-207ENST00000540763 PNMA1Q8ND90 353 aa22.79■■□□□ 1.24
DDX55-207ENST00000540763 ERO1AQ96HE7 468 aa22.79■■□□□ 1.24
DDX55-207ENST00000540763 CPA4Q9UI42 421 aa22.79■■□□□ 1.24
DDX55-207ENST00000540763 FEM1BQ9UK73 627 aa22.79■■□□□ 1.24
DDX55-207ENST00000540763 RABGAP1Q9Y3P9 1069 aa22.79■■□□□ 1.24
DDX55-207ENST00000540763 PRC1O43663 620 aa22.78■■□□□ 1.24
DDX55-207ENST00000540763 WTAPQ15007 396 aa22.78■■□□□ 1.24
DDX55-207ENST00000540763 ADCK5Q3MIX3 580 aa22.78■■□□□ 1.24
DDX55-207ENST00000540763 IGDCC4Q8TDY8 1250 aa22.78■■□□□ 1.24
DDX55-207ENST00000540763 PPP1R9AQ9ULJ8 1098 aa22.78■■□□□ 1.24
DDX55-207ENST00000540763 ADAMTS5Q9UNA0 930 aa22.78■■□□□ 1.24
DDX55-207ENST00000540763 PDHBP11177 359 aa22.77■■□□□ 1.24
DDX55-207ENST00000540763 PSMA5P28066 241 aa22.77■■□□□ 1.24
DDX55-207ENST00000540763 STAT2P52630 851 aa22.77■■□□□ 1.24
DDX55-207ENST00000540763 TMEM67Q5HYA8 995 aa22.77■■□□□ 1.24
DDX55-207ENST00000540763 DHX32Q7L7V1 743 aaKnown RBP22.77■■□□□ 1.24
DDX55-207ENST00000540763 CTU1Q7Z7A3 348 aaKnown RBP22.77■■□□□ 1.24
DDX55-207ENST00000540763 FAM160B2Q86V87 743 aa22.77■■□□□ 1.24
DDX55-207ENST00000540763 TMTC2Q8N394 836 aa22.77■■□□□ 1.24
DDX55-207ENST00000540763 ANKRD13CQ8N6S4 541 aa22.77■■□□□ 1.24
DDX55-207ENST00000540763 NUP88Q99567 741 aaPredicted RBP22.77■■□□□ 1.24
DDX55-207ENST00000540763 SLF1Q9BQI6 1058 aa22.77■■□□□ 1.24
DDX55-207ENST00000540763 PDE4DIPQ5VU43 2346 aa22.77■■□□□ 1.24
DDX55-207ENST00000540763 ZSWIM8A7E2V4 1837 aa22.77■■□□□ 1.24
DDX55-207ENST00000540763 FDX1P10109 184 aa22.76■■□□□ 1.23
DDX55-207ENST00000540763 LIFRP42702 1097 aa22.76■■□□□ 1.23
DDX55-207ENST00000540763 ANAPC15P60006 121 aa22.76■■□□□ 1.23
DDX55-207ENST00000540763 LACTBP83111 547 aaPredicted RBP22.76■■□□□ 1.23
DDX55-207ENST00000540763 GPATCH4Q5T3I0 446 aaKnown RBP22.76■■□□□ 1.23
DDX55-207ENST00000540763 PRPF38AQ8NAV1 312 aaKnown RBP22.76■■□□□ 1.23
DDX55-207ENST00000540763 CHURC1Q8WUH1 139 aa22.76■■□□□ 1.23
DDX55-207ENST00000540763 IL17RAQ96F46 866 aa22.76■■□□□ 1.23
DDX55-207ENST00000540763 SH2B2O14492 632 aaPredicted RBP22.75■■□□□ 1.23
DDX55-207ENST00000540763 ERVK-9P63128 1117 aa22.75■■□□□ 1.23
DDX55-207ENST00000540763 ERVK-24P63145 666 aa22.75■■□□□ 1.23
DDX55-207ENST00000540763 EXOSC10Q01780 885 aaKnown RBP22.75■■□□□ 1.23
DDX55-207ENST00000540763 KIF22Q14807 665 aa22.75■■□□□ 1.23
DDX55-207ENST00000540763 ARHGEF6Q15052 776 aa22.75■■□□□ 1.23
DDX55-207ENST00000540763 CHST3Q7LGC8 479 aa22.75■■□□□ 1.23
DDX55-207ENST00000540763 GPRC5AQ8NFJ5 357 aa22.75■■□□□ 1.23
DDX55-207ENST00000540763 TM6SF1Q9BZW5 370 aa22.75■■□□□ 1.23
DDX55-207ENST00000540763 LY9Q9HBG7 655 aa22.75■■□□□ 1.23
DDX55-207ENST00000540763 RBPJLQ9UBG7 517 aa22.75■■□□□ 1.23
DDX55-207ENST00000540763 TMEM232C9JQI7 657 aa22.74■■□□□ 1.23
DDX55-207ENST00000540763 GNRH1P01148 92 aa22.74■■□□□ 1.23
DDX55-207ENST00000540763 ZNF543Q08ER8 600 aa22.74■■□□□ 1.23
DDX55-207ENST00000540763 ASPRV1Q53RT3 343 aa22.74■■□□□ 1.23
DDX55-207ENST00000540763 BLOC1S2Q6QNY1 142 aa22.74■■□□□ 1.23
DDX55-207ENST00000540763 POTEEQ6S8J3 1075 aa22.74■■□□□ 1.23
DDX55-207ENST00000540763 BTNL9Q6UXG8 535 aa22.74■■□□□ 1.23
DDX55-207ENST00000540763 ATG4CQ96DT6 458 aa22.74■■□□□ 1.23
DDX55-207ENST00000540763 JAKMIP1Q96N16 626 aaKnown RBP22.74■■□□□ 1.23
DDX55-207ENST00000540763 TXNRD2Q9NNW7 524 aa22.74■■□□□ 1.23
DDX55-207ENST00000540763 FBXO28Q9NVF7 368 aa22.74■■□□□ 1.23
DDX55-207ENST00000540763 VWA5AO00534 786 aa22.73■■□□□ 1.23
DDX55-207ENST00000540763 CNMDO75829 334 aa22.73■■□□□ 1.23
DDX55-207ENST00000540763 CCNA1P78396 465 aa22.73■■□□□ 1.23
DDX55-207ENST00000540763 CCDC96Q2M329 555 aa22.73■■□□□ 1.23
DDX55-207ENST00000540763 SGMS1Q86VZ5 419 aa22.73■■□□□ 1.23
DDX55-207ENST00000540763 FBXL16Q8N461 479 aa22.73■■□□□ 1.23
DDX55-207ENST00000540763 MAP3K14Q99558 947 aa22.73■■□□□ 1.23
DDX55-207ENST00000540763 MYH6P13533 1939 aa22.72■■□□□ 1.23
DDX55-207ENST00000540763 DDAH1O94760 285 aa22.72■■□□□ 1.23
DDX55-207ENST00000540763 SLC34A2O95436 690 aa22.72■■□□□ 1.23
DDX55-207ENST00000540763 SEC24BO95487 1268 aa22.72■■□□□ 1.23
DDX55-207ENST00000540763 COL9A3Q14050 684 aaPredicted RBP22.72■■□□□ 1.23
DDX55-207ENST00000540763 KCTD1Q719H9 257 aa22.72■■□□□ 1.23
DDX55-207ENST00000540763 CD99L2Q8TCZ2 262 aa22.72■■□□□ 1.23
DDX55-207ENST00000540763 PAGR1Q9BTK6 254 aa22.72■■□□□ 1.23
DDX55-207ENST00000540763 PLXNB2O15031 1838 aa22.72■■□□□ 1.23
DDX55-207ENST00000540763 ZNF236Q9UL36 1845 aa22.72■■□□□ 1.23
DDX55-207ENST00000540763 DOCK3Q8IZD9 2030 aa22.71■■□□□ 1.23
DDX55-207ENST00000540763 ATP2A1O14983 1001 aa22.71■■□□□ 1.23
DDX55-207ENST00000540763 RPS6KB1P23443 525 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms