RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 BRD2P25440 801 aaKnown RBP14.25□□□□□ -0.13
SFSWAP-208ENST00000539506 KRT2P35908 639 aa14.25□□□□□ -0.13
SFSWAP-208ENST00000539506 TMTC3Q6ZXV5 915 aa14.25□□□□□ -0.13
SFSWAP-208ENST00000539506 CATIPQ7Z7H3 387 aa14.25□□□□□ -0.13
SFSWAP-208ENST00000539506 SYMPKQ92797 1274 aaKnown RBP14.25□□□□□ -0.13
SFSWAP-208ENST00000539506 EEF2KMTQ96G04 330 aa14.25□□□□□ -0.13
SFSWAP-208ENST00000539506 MRFAP1Q9Y605 127 aa14.25□□□□□ -0.13
SFSWAP-208ENST00000539506 CNTNAP5Q8WYK1 1306 aa14.25□□□□□ -0.13
SFSWAP-208ENST00000539506 TRIM75PA6NK02 468 aa14.25□□□□□ -0.13
SFSWAP-208ENST00000539506 ARHGAP6O43182 974 aa14.25□□□□□ -0.13
SFSWAP-208ENST00000539506 CCT6AP40227 531 aaKnown RBP14.25□□□□□ -0.13
SFSWAP-208ENST00000539506 SLC10A5Q5PT55 438 aa14.25□□□□□ -0.13
SFSWAP-208ENST00000539506 RAD9BQ6WBX8 426 aa14.25□□□□□ -0.13
SFSWAP-208ENST00000539506 BARGINQ6ZT62 677 aa14.25□□□□□ -0.13
SFSWAP-208ENST00000539506 APTXQ7Z2E3 356 aaKnown RBP14.25□□□□□ -0.13
SFSWAP-208ENST00000539506 ACRBPQ8NEB7 543 aa14.25□□□□□ -0.13
SFSWAP-208ENST00000539506 ENOX1Q8TC92 643 aaKnown RBP14.25□□□□□ -0.13
SFSWAP-208ENST00000539506 CCDC102AQ96A19 550 aa14.25□□□□□ -0.13
SFSWAP-208ENST00000539506 IL17AQ16552 155 aa14.24□□□□□ -0.13
SFSWAP-208ENST00000539506 FAM98CQ17RN3 349 aaKnown RBP14.24□□□□□ -0.13
SFSWAP-208ENST00000539506 KIF4BQ2VIQ3 1234 aa14.24□□□□□ -0.13
SFSWAP-208ENST00000539506 SH3RF1Q7Z6J0 888 aa14.24□□□□□ -0.13
SFSWAP-208ENST00000539506 MLKLQ8NB16 471 aa14.24□□□□□ -0.13
SFSWAP-208ENST00000539506 MAPK8IP1Q9UQF2 711 aa14.24□□□□□ -0.13
SFSWAP-208ENST00000539506 TULP2O00295 520 aa14.24□□□□□ -0.13
SFSWAP-208ENST00000539506 ZMYND10O75800 440 aa14.24□□□□□ -0.13
SFSWAP-208ENST00000539506 RPS8P62241 208 aaKnown RBP14.24□□□□□ -0.13
SFSWAP-208ENST00000539506 RBL2Q08999 1139 aa14.24□□□□□ -0.13
SFSWAP-208ENST00000539506 PAGE5Q96GU1 130 aa14.24□□□□□ -0.13
SFSWAP-208ENST00000539506 AKAP17AQ02040 695 aaKnown RBP14.24□□□□□ -0.13
SFSWAP-208ENST00000539506 PPP2R5BQ15173 497 aa14.24□□□□□ -0.13
SFSWAP-208ENST00000539506 RCSD1Q6JBY9 416 aa14.24□□□□□ -0.13
SFSWAP-208ENST00000539506 SMARCC1Q92922 1105 aaPredicted RBP14.24□□□□□ -0.13
SFSWAP-208ENST00000539506 KIFC2Q96AC6 838 aa14.24□□□□□ -0.13
SFSWAP-208ENST00000539506 CEP131Q9UPN4 1083 aa14.24□□□□□ -0.13
SFSWAP-208ENST00000539506 FAN1Q9Y2M0 1017 aa14.24□□□□□ -0.13
SFSWAP-208ENST00000539506 TM4SF1P30408 202 aa14.23□□□□□ -0.13
SFSWAP-208ENST00000539506 CHMP4BP1P59074 171 aa14.23□□□□□ -0.13
SFSWAP-208ENST00000539506 PPARDQ03181 441 aa14.23□□□□□ -0.13
SFSWAP-208ENST00000539506 DPYDQ12882 1025 aa14.23□□□□□ -0.13
SFSWAP-208ENST00000539506 FKBP15Q5T1M5 1219 aa14.23□□□□□ -0.13
SFSWAP-208ENST00000539506 SPECC1LQ69YQ0 1117 aa14.23□□□□□ -0.13
SFSWAP-208ENST00000539506 SAMD1Q6SPF0 538 aaPredicted RBP14.23□□□□□ -0.13
SFSWAP-208ENST00000539506 IQCA1Q86XH1 822 aa14.23□□□□□ -0.13
SFSWAP-208ENST00000539506 ABCB6Q9NP58 842 aa14.23□□□□□ -0.13
SFSWAP-208ENST00000539506 GPR161Q8N6U8 529 aaKnown RBP14.23□□□□□ -0.13
SFSWAP-208ENST00000539506 GOLGA1Q92805 767 aa14.23□□□□□ -0.13
SFSWAP-208ENST00000539506 IRS2Q9Y4H2 1338 aa14.22□□□□□ -0.13
SFSWAP-208ENST00000539506 MYO1CO00159 1063 aa14.22□□□□□ -0.13
SFSWAP-208ENST00000539506 MRPS25P82663 173 aaKnown RBP14.22□□□□□ -0.13
SFSWAP-208ENST00000539506 PTGDRQ13258 359 aa14.22□□□□□ -0.13
SFSWAP-208ENST00000539506 CUL4BQ13620 913 aa14.22□□□□□ -0.13
SFSWAP-208ENST00000539506 NR1I3Q14994 352 aa14.22□□□□□ -0.13
SFSWAP-208ENST00000539506 MTRQ99707 1265 aa14.22□□□□□ -0.13
SFSWAP-208ENST00000539506 HOOK1Q9UJC3 728 aaKnown RBP14.22□□□□□ -0.13
SFSWAP-208ENST00000539506 DLEC1Q9Y238 1755 aa14.22□□□□□ -0.13
SFSWAP-208ENST00000539506 PES1O00541 588 aaKnown RBP14.22□□□□□ -0.13
SFSWAP-208ENST00000539506 ORC4O43929 436 aa14.22□□□□□ -0.13
SFSWAP-208ENST00000539506 USP17L8P0C7I0 530 aa14.22□□□□□ -0.13
SFSWAP-208ENST00000539506 HIBADHP31937 336 aaKnown RBP14.22□□□□□ -0.13
SFSWAP-208ENST00000539506 PLCD1P51178 756 aa14.22□□□□□ -0.13
SFSWAP-208ENST00000539506 RBM28Q9NW13 759 aaKnown RBP14.22□□□□□ -0.13
SFSWAP-208ENST00000539506 TRIM10Q9UDY6 481 aa14.22□□□□□ -0.13
SFSWAP-208ENST00000539506 EP400Q96L91 3159 aa14.22□□□□□ -0.13
SFSWAP-208ENST00000539506 ENC1O14682 589 aa14.21□□□□□ -0.13
SFSWAP-208ENST00000539506 CCP110O43303 1012 aa14.21□□□□□ -0.13
SFSWAP-208ENST00000539506 MYO1BO43795 1136 aa14.21□□□□□ -0.13
SFSWAP-208ENST00000539506 FAM193AP78312 1265 aa14.21□□□□□ -0.13
SFSWAP-208ENST00000539506 GPS2Q13227 327 aa14.21□□□□□ -0.13
SFSWAP-208ENST00000539506 GRIK5Q16478 980 aa14.21□□□□□ -0.13
SFSWAP-208ENST00000539506 NCAPH2Q6IBW4 605 aa14.21□□□□□ -0.13
SFSWAP-208ENST00000539506 TXLNBQ8N3L3 684 aa14.21□□□□□ -0.13
SFSWAP-208ENST00000539506 TRIML1Q8N9V2 468 aa14.21□□□□□ -0.13
SFSWAP-208ENST00000539506 DDAH1O94760 285 aa14.21□□□□□ -0.13
SFSWAP-208ENST00000539506 RSRC2Q7L4I2 434 aaKnown RBP14.21□□□□□ -0.13
SFSWAP-208ENST00000539506 SLC35F6Q8N357 371 aa14.21□□□□□ -0.13
SFSWAP-208ENST00000539506 RIN2Q8WYP3 895 aaPredicted RBP14.21□□□□□ -0.13
SFSWAP-208ENST00000539506 IL17RBQ9NRM6 502 aa14.21□□□□□ -0.13
SFSWAP-208ENST00000539506 PPP1R3GB7ZBB8 358 aa14.21□□□□□ -0.14
SFSWAP-208ENST00000539506 XBP1P17861 261 aa14.21□□□□□ -0.14
SFSWAP-208ENST00000539506 CASP14P31944 242 aa14.21□□□□□ -0.14
SFSWAP-208ENST00000539506 TXLNAP40222 546 aa14.21□□□□□ -0.14
SFSWAP-208ENST00000539506 SLC35G1Q2M3R5 365 aa14.21□□□□□ -0.14
SFSWAP-208ENST00000539506 TTC38Q5R3I4 469 aa14.21□□□□□ -0.14
SFSWAP-208ENST00000539506 PIK3AP1Q6ZUJ8 805 aa14.21□□□□□ -0.14
SFSWAP-208ENST00000539506 IGSF22Q8N9C0 903 aa14.21□□□□□ -0.14
SFSWAP-208ENST00000539506 ANKZF1Q9H8Y5 726 aa14.21□□□□□ -0.14
SFSWAP-208ENST00000539506 XDHP47989 1333 aa14.2□□□□□ -0.14
SFSWAP-208ENST00000539506 ATP2C1P98194 919 aaPredicted RBP14.2□□□□□ -0.14
SFSWAP-208ENST00000539506 E2F4Q16254 413 aa14.2□□□□□ -0.14
SFSWAP-208ENST00000539506 FAM182BQ5T319 152 aa14.2□□□□□ -0.14
SFSWAP-208ENST00000539506 JAKMIP3Q5VZ66 844 aa14.2□□□□□ -0.14
SFSWAP-208ENST00000539506 DYNLL2Q96FJ2 89 aa14.2□□□□□ -0.14
SFSWAP-208ENST00000539506 BLZF1Q9H2G9 400 aa14.2□□□□□ -0.14
SFSWAP-208ENST00000539506 A0A1B0GTH6 734 aa14.2□□□□□ -0.14
SFSWAP-208ENST00000539506 RNF225M0QZC1 329 aaPredicted RBP14.2□□□□□ -0.14
SFSWAP-208ENST00000539506 VSNL1P62760 191 aa14.2□□□□□ -0.14
SFSWAP-208ENST00000539506 KANK3Q6NY19 840 aa14.2□□□□□ -0.14
SFSWAP-208ENST00000539506 NBPF5PQ86XG9 351 aaPredicted RBP14.2□□□□□ -0.14
SFSWAP-208ENST00000539506 STAG2Q8N3U4 1231 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms