RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 KIF2AO00139 706 aaPredicted RBP20.4■□□□□ 0.86
GNE-204ENST00000539208 CCDC112Q8NEF3 446 aa20.4■□□□□ 0.86
GNE-204ENST00000539208 TMEM47Q9BQJ4 181 aa20.4■□□□□ 0.86
GNE-204ENST00000539208 POLLQ9UGP5 575 aa20.4■□□□□ 0.86
GNE-204ENST00000539208 NFE2L3Q9Y4A8 694 aa20.4■□□□□ 0.86
GNE-204ENST00000539208 FAM205AQ6ZU69 1335 aa20.4■□□□□ 0.86
GNE-204ENST00000539208 LRRC37AA6NMS7 1700 aa20.39■□□□□ 0.86
GNE-204ENST00000539208 POLRMTO00411 1230 aaKnown RBP20.39■□□□□ 0.86
GNE-204ENST00000539208 DPYDQ12882 1025 aa20.39■□□□□ 0.86
GNE-204ENST00000539208 TEX11Q8IYF3 940 aa20.39■□□□□ 0.86
GNE-204ENST00000539208 LTBP1Q14766 1721 aa20.39■□□□□ 0.85
GNE-204ENST00000539208 CDK8P49336 464 aa20.39■□□□□ 0.85
GNE-204ENST00000539208 RHBDL3P58872 404 aa20.39■□□□□ 0.85
GNE-204ENST00000539208 DDR1Q08345 913 aa20.39■□□□□ 0.85
GNE-204ENST00000539208 E2F4Q16254 413 aa20.39■□□□□ 0.85
GNE-204ENST00000539208 C4orf32Q8N8J7 132 aa20.39■□□□□ 0.85
GNE-204ENST00000539208 IQUBQ8NA54 791 aa20.39■□□□□ 0.85
GNE-204ENST00000539208 CCDC148Q8NFR7 591 aa20.39■□□□□ 0.85
GNE-204ENST00000539208 NEDD1Q8NHV4 660 aa20.39■□□□□ 0.85
GNE-204ENST00000539208 ZNF827Q17R98 1081 aa20.38■□□□□ 0.85
GNE-204ENST00000539208 MFSD14BQ5SR56 506 aa20.38■□□□□ 0.85
GNE-204ENST00000539208 E4F1Q66K89 784 aaPredicted RBP20.38■□□□□ 0.85
GNE-204ENST00000539208 SLC44A5Q8NCS7 719 aa20.38■□□□□ 0.85
GNE-204ENST00000539208 MED15Q96RN5 788 aa20.38■□□□□ 0.85
GNE-204ENST00000539208 TMX1Q9H3N1 280 aa20.38■□□□□ 0.85
GNE-204ENST00000539208 SAP30BPQ9UHR5 308 aaKnown RBP20.38■□□□□ 0.85
GNE-204ENST00000539208 ADAMTS3O15072 1205 aa20.38■□□□□ 0.85
GNE-204ENST00000539208 LONP1P36776 959 aaKnown RBP20.38■□□□□ 0.85
GNE-204ENST00000539208 SLC35G1Q2M3R5 365 aa20.38■□□□□ 0.85
GNE-204ENST00000539208 SP8Q8IXZ3 490 aa20.38■□□□□ 0.85
GNE-204ENST00000539208 INTS13Q9NVM9 706 aa20.38■□□□□ 0.85
GNE-204ENST00000539208 FLT1P17948 1338 aa20.37■□□□□ 0.85
GNE-204ENST00000539208 SNED1Q8TER0 1413 aa20.37■□□□□ 0.85
GNE-204ENST00000539208 TOP1P11387 765 aaKnown RBP20.37■□□□□ 0.85
GNE-204ENST00000539208 MCM7P33993 719 aa20.37■□□□□ 0.85
GNE-204ENST00000539208 AFMP43652 599 aa20.37■□□□□ 0.85
GNE-204ENST00000539208 SYCP1Q15431 976 aa20.37■□□□□ 0.85
GNE-204ENST00000539208 IL17AQ16552 155 aa20.37■□□□□ 0.85
GNE-204ENST00000539208 EYA3Q99504 573 aa20.37■□□□□ 0.85
GNE-204ENST00000539208 SPZ1Q9BXG8 430 aa20.37■□□□□ 0.85
GNE-204ENST00000539208 BARHL2Q9NY43 387 aa20.37■□□□□ 0.85
GNE-204ENST00000539208 CYTH3O43739 400 aa20.36■□□□□ 0.85
GNE-204ENST00000539208 TUBB4AP04350 444 aa20.36■□□□□ 0.85
GNE-204ENST00000539208 SMARCA1P28370 1054 aa20.36■□□□□ 0.85
GNE-204ENST00000539208 NOVP48745 357 aa20.36■□□□□ 0.85
GNE-204ENST00000539208 TBX2Q13207 712 aaPredicted RBP20.36■□□□□ 0.85
GNE-204ENST00000539208 GPKOWQ92917 476 aaPredicted RBP eCLIP20.36■□□□□ 0.85
GNE-204ENST00000539208 STX8Q9UNK0 236 aa20.36■□□□□ 0.85
GNE-204ENST00000539208 BAZ2BQ9UIF8 2168 aaKnown RBP20.36■□□□□ 0.85
GNE-204ENST00000539208 CDK11BP21127 795 aaKnown RBP20.36■□□□□ 0.85
GNE-204ENST00000539208 CUL4BQ13620 913 aa20.36■□□□□ 0.85
GNE-204ENST00000539208 WWC2Q6AWC2 1192 aa20.36■□□□□ 0.85
GNE-204ENST00000539208 ZNF710Q8N1W2 664 aa20.36■□□□□ 0.85
GNE-204ENST00000539208 TRMT1Q9NXH9 659 aaKnown RBP20.36■□□□□ 0.85
GNE-204ENST00000539208 SUGT1Q9Y2Z0 365 aa20.36■□□□□ 0.85
GNE-204ENST00000539208 STXBP3O00186 592 aa20.35■□□□□ 0.85
GNE-204ENST00000539208 CCP110O43303 1012 aa20.35■□□□□ 0.85
GNE-204ENST00000539208 SPATA1Q5VX52 437 aa20.35■□□□□ 0.85
GNE-204ENST00000539208 TYW1BQ6NUM6 668 aa20.35■□□□□ 0.85
GNE-204ENST00000539208 PDXDC2PQ6P474 469 aa20.35■□□□□ 0.85
GNE-204ENST00000539208 QTRT2Q9H974 415 aaKnown RBP20.35■□□□□ 0.85
GNE-204ENST00000539208 PCDHA6Q9UN73 950 aa20.35■□□□□ 0.85
GNE-204ENST00000539208 PCDHA8Q9Y5H6 950 aa20.35■□□□□ 0.85
GNE-204ENST00000539208 CCDC194A0A1B0GVG4 234 aa20.35■□□□□ 0.85
GNE-204ENST00000539208 TMEM232C9JQI7 657 aa20.35■□□□□ 0.85
GNE-204ENST00000539208 TSC1Q92574 1164 aa20.35■□□□□ 0.85
GNE-204ENST00000539208 FOCADQ5VW36 1801 aa20.35■□□□□ 0.85
GNE-204ENST00000539208 KLRF2D3W0D1 207 aa20.34■□□□□ 0.85
GNE-204ENST00000539208 C6orf229H3BNL8 230 aa20.34■□□□□ 0.85
GNE-204ENST00000539208 HSPA1LP34931 641 aa20.34■□□□□ 0.85
GNE-204ENST00000539208 TRMT44Q8IYL2 757 aaKnown RBP20.34■□□□□ 0.85
GNE-204ENST00000539208 PPP1R13BQ96KQ4 1090 aa20.34■□□□□ 0.85
GNE-204ENST00000539208 FCHSD1Q86WN1 690 aa20.34■□□□□ 0.85
GNE-204ENST00000539208 COA1Q9GZY4 146 aa20.34■□□□□ 0.85
GNE-204ENST00000539208 MYH1P12882 1939 aa20.33■□□□□ 0.85
GNE-204ENST00000539208 PPP1R3GB7ZBB8 358 aa20.33■□□□□ 0.85
GNE-204ENST00000539208 LAD1O00515 517 aa20.33■□□□□ 0.85
GNE-204ENST00000539208 PPEF1O14829 653 aaPredicted RBP20.33■□□□□ 0.85
GNE-204ENST00000539208 GTPBP6O43824 516 aaPredicted RBP20.33■□□□□ 0.85
GNE-204ENST00000539208 NR1I3Q14994 352 aa20.33■□□□□ 0.85
GNE-204ENST00000539208 SPECC1LQ69YQ0 1117 aa20.33■□□□□ 0.85
GNE-204ENST00000539208 KIF18AQ8NI77 898 aa20.33■□□□□ 0.85
GNE-204ENST00000539208 CCDC12Q8WUD4 166 aaPredicted RBP20.33■□□□□ 0.85
GNE-204ENST00000539208 ZMYND12Q9H0C1 365 aa20.33■□□□□ 0.85
GNE-204ENST00000539208 SAMSN1Q9NSI8 373 aaKnown RBP20.33■□□□□ 0.85
GNE-204ENST00000539208 ATP6V0A2Q9Y487 856 aa20.33■□□□□ 0.85
GNE-204ENST00000539208 A0A1B0GTH6 734 aa20.32■□□□□ 0.84
GNE-204ENST00000539208 PARP1P09874 1014 aaKnown RBP20.32■□□□□ 0.84
GNE-204ENST00000539208 CD44P16070 742 aaKnown RBP20.32■□□□□ 0.84
GNE-204ENST00000539208 TXLNAP40222 546 aa20.32■□□□□ 0.84
GNE-204ENST00000539208 KRT27Q7Z3Y8 459 aa20.32■□□□□ 0.84
GNE-204ENST00000539208 HEATR3Q7Z4Q2 680 aa20.32■□□□□ 0.84
GNE-204ENST00000539208 ANKRD7Q92527 254 aa20.32■□□□□ 0.84
GNE-204ENST00000539208 PLIN4Q96Q06 1357 aa20.32■□□□□ 0.84
GNE-204ENST00000539208 CDKAL1Q5VV42 579 aa20.32■□□□□ 0.84
GNE-204ENST00000539208 DAGLAQ9Y4D2 1042 aa20.32■□□□□ 0.84
GNE-204ENST00000539208 SYNRGQ9UMZ2 1314 aa20.31■□□□□ 0.84
GNE-204ENST00000539208 PRPHP41219 470 aa20.31■□□□□ 0.84
GNE-204ENST00000539208 ZNF592Q92610 1267 aa20.31■□□□□ 0.84
GNE-204ENST00000539208 TRIM37O94972 964 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms