RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 RARBP10826 455 aa16.93■□□□□ 0.3
SMARCA4-206ENST00000538456 ITGB8P26012 769 aa16.93■□□□□ 0.3
SMARCA4-206ENST00000538456 TMEM132BQ14DG7 1078 aa16.93■□□□□ 0.3
SMARCA4-206ENST00000538456 SIAH1Q8IUQ4 282 aa16.93■□□□□ 0.3
SMARCA4-206ENST00000538456 LENG1Q96BZ8 264 aaPredicted RBP16.93■□□□□ 0.3
SMARCA4-206ENST00000538456 RNPC3Q96LT9 517 aaKnown RBP16.93■□□□□ 0.3
SMARCA4-206ENST00000538456 MMP19Q99542 508 aa16.93■□□□□ 0.3
SMARCA4-206ENST00000538456 SH2D4AQ9H788 454 aa16.93■□□□□ 0.3
SMARCA4-206ENST00000538456 VCPKMTQ9H867 229 aa16.93■□□□□ 0.3
SMARCA4-206ENST00000538456 ARMT1Q9H993 441 aa16.93■□□□□ 0.3
SMARCA4-206ENST00000538456 SWAP70Q9UH65 585 aa16.93■□□□□ 0.3
SMARCA4-206ENST00000538456 PHF24Q9UPV7 400 aa16.93■□□□□ 0.3
SMARCA4-206ENST00000538456 TMX2Q9Y320 296 aa16.93■□□□□ 0.3
SMARCA4-206ENST00000538456 TTC28Q96AY4 2481 aa16.92■□□□□ 0.3
SMARCA4-206ENST00000538456 PRKAB2O43741 272 aa16.92■□□□□ 0.3
SMARCA4-206ENST00000538456 PQBP1O60828 265 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-206ENST00000538456 CLTBP09497 229 aa16.92■□□□□ 0.3
SMARCA4-206ENST00000538456 SLFNL1Q499Z3 407 aa16.92■□□□□ 0.3
SMARCA4-206ENST00000538456 C1orf53Q5VUE5 145 aa16.92■□□□□ 0.3
SMARCA4-206ENST00000538456 FBXO28Q9NVF7 368 aa16.92■□□□□ 0.3
SMARCA4-206ENST00000538456 CYP2D7A0A087X1C5 515 aa16.91■□□□□ 0.3
SMARCA4-206ENST00000538456 SMIM22K7EJ46 135 aa16.91■□□□□ 0.3
SMARCA4-206ENST00000538456 WDR46O15213 610 aaKnown RBP16.91■□□□□ 0.3
SMARCA4-206ENST00000538456 RAD21O60216 631 aa16.91■□□□□ 0.3
SMARCA4-206ENST00000538456 TAL1P17542 331 aaPredicted RBP16.91■□□□□ 0.3
SMARCA4-206ENST00000538456 EPHB4P54760 987 aa16.91■□□□□ 0.3
SMARCA4-206ENST00000538456 RNF180Q86T96 592 aa16.91■□□□□ 0.3
SMARCA4-206ENST00000538456 RHPN1Q8TCX5 695 aa16.91■□□□□ 0.3
SMARCA4-206ENST00000538456 TACC3Q9Y6A5 838 aa16.91■□□□□ 0.3
SMARCA4-206ENST00000538456 A0A1W2PQ45 241 aaPredicted RBP16.9■□□□□ 0.3
SMARCA4-206ENST00000538456 A0A1W2PQY0 241 aa16.9■□□□□ 0.3
SMARCA4-206ENST00000538456 MBD4O95243 580 aa16.9■□□□□ 0.3
SMARCA4-206ENST00000538456 SLC25A27O95847 323 aa16.9■□□□□ 0.3
SMARCA4-206ENST00000538456 RAG1P15918 1043 aa16.9■□□□□ 0.3
SMARCA4-206ENST00000538456 KCTD2Q14681 263 aa16.9■□□□□ 0.3
SMARCA4-206ENST00000538456 TINF2Q9BSI4 451 aa16.9■□□□□ 0.3
SMARCA4-206ENST00000538456 MYH7P12883 1935 aa16.9■□□□□ 0.3
SMARCA4-206ENST00000538456 IFIT2P09913 472 aaKnown RBP16.89■□□□□ 0.29
SMARCA4-206ENST00000538456 EEF2P13639 858 aaKnown RBP16.89■□□□□ 0.29
SMARCA4-206ENST00000538456 CDK8P49336 464 aa16.89■□□□□ 0.29
SMARCA4-206ENST00000538456 FPGSQ05932 587 aa16.89■□□□□ 0.29
SMARCA4-206ENST00000538456 HSP90AB4PQ58FF6 505 aa16.89■□□□□ 0.29
SMARCA4-206ENST00000538456 CLASRPQ8N2M8 674 aaKnown RBP16.89■□□□□ 0.29
SMARCA4-206ENST00000538456 NRBP1Q9UHY1 535 aa16.89■□□□□ 0.29
SMARCA4-206ENST00000538456 KIAA0355O15063 1070 aa16.88■□□□□ 0.29
SMARCA4-206ENST00000538456 RIOX2Q8IUF8 465 aa16.88■□□□□ 0.29
SMARCA4-206ENST00000538456 PANK1Q8TE04 598 aa16.88■□□□□ 0.29
SMARCA4-206ENST00000538456 CCDC17Q96LX7 622 aa16.88■□□□□ 0.29
SMARCA4-206ENST00000538456 TMEM39AQ9NV64 488 aa16.88■□□□□ 0.29
SMARCA4-206ENST00000538456 CNPY2Q9Y2B0 182 aa16.88■□□□□ 0.29
SMARCA4-206ENST00000538456 MUC3AQ02505 3323 aa16.88■□□□□ 0.29
SMARCA4-206ENST00000538456 ROBO3Q96MS0 1386 aa16.88■□□□□ 0.29
SMARCA4-206ENST00000538456 USP17L12C9JPN9 530 aa16.87■□□□□ 0.29
SMARCA4-206ENST00000538456 USP17L21D6R901 530 aa16.87■□□□□ 0.29
SMARCA4-206ENST00000538456 VWA5AO00534 786 aa16.87■□□□□ 0.29
SMARCA4-206ENST00000538456 ZNF865P0CJ78 1059 aaPredicted RBP16.87■□□□□ 0.29
SMARCA4-206ENST00000538456 AKR1A1P14550 325 aa16.87■□□□□ 0.29
SMARCA4-206ENST00000538456 ADD2P35612 726 aa16.87■□□□□ 0.29
SMARCA4-206ENST00000538456 STAT3P40763 770 aa16.87■□□□□ 0.29
SMARCA4-206ENST00000538456 ZNF792Q3KQV3 632 aa16.87■□□□□ 0.29
SMARCA4-206ENST00000538456 FAM83BQ5T0W9 1011 aa16.87■□□□□ 0.29
SMARCA4-206ENST00000538456 AMOTL1Q8IY63 956 aa16.87■□□□□ 0.29
SMARCA4-206ENST00000538456 GOPCQ9HD26 462 aa16.87■□□□□ 0.29
SMARCA4-206ENST00000538456 ATP8A2Q9NTI2 1148 aa16.87■□□□□ 0.29
SMARCA4-206ENST00000538456 PAG1Q9NWQ8 432 aa16.87■□□□□ 0.29
SMARCA4-206ENST00000538456 ZNF214Q9UL59 606 aaPredicted RBP16.87■□□□□ 0.29
SMARCA4-206ENST00000538456 PPP1R9AQ9ULJ8 1098 aa16.87■□□□□ 0.29
SMARCA4-206ENST00000538456 ADAMTS5Q9UNA0 930 aa16.87■□□□□ 0.29
SMARCA4-206ENST00000538456 MCM3APO60318 1980 aa16.86■□□□□ 0.29
SMARCA4-206ENST00000538456 CHGBP05060 677 aa16.86■□□□□ 0.29
SMARCA4-206ENST00000538456 DNAJB2P25686 324 aa16.86■□□□□ 0.29
SMARCA4-206ENST00000538456 GRIN2CQ14957 1233 aa16.86■□□□□ 0.29
SMARCA4-206ENST00000538456 C12orf60Q5U649 245 aa16.86■□□□□ 0.29
SMARCA4-206ENST00000538456 C16orf86Q6ZW13 317 aa16.86■□□□□ 0.29
SMARCA4-206ENST00000538456 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.86■□□□□ 0.29
SMARCA4-206ENST00000538456 KIF1BPQ96EK5 621 aa16.86■□□□□ 0.29
SMARCA4-206ENST00000538456 BOLA2Q9H3K6 86 aa16.86■□□□□ 0.29
SMARCA4-206ENST00000538456 KANSL2Q9H9L4 492 aa16.86■□□□□ 0.29
SMARCA4-206ENST00000538456 STARD7Q9NQZ5 370 aa16.86■□□□□ 0.29
SMARCA4-206ENST00000538456 SYNRGQ9UMZ2 1314 aa16.86■□□□□ 0.29
SMARCA4-206ENST00000538456 TMEM265A0A087WTH1 108 aa16.85■□□□□ 0.29
SMARCA4-206ENST00000538456 DCDC2CA8MYV0 355 aa16.85■□□□□ 0.29
SMARCA4-206ENST00000538456 ADAMTS4O75173 837 aa16.85■□□□□ 0.29
SMARCA4-206ENST00000538456 ACLYP53396 1101 aa16.85■□□□□ 0.29
SMARCA4-206ENST00000538456 FAAP100Q0VG06 881 aa16.85■□□□□ 0.29
SMARCA4-206ENST00000538456 USP38Q8NB14 1042 aa16.85■□□□□ 0.29
SMARCA4-206ENST00000538456 DDRGK1Q96HY6 314 aa16.85■□□□□ 0.29
SMARCA4-206ENST00000538456 NUP88Q99567 741 aaPredicted RBP16.85■□□□□ 0.29
SMARCA4-206ENST00000538456 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.85■□□□□ 0.29
SMARCA4-206ENST00000538456 PRDM6Q9NQX0 595 aa16.85■□□□□ 0.29
SMARCA4-206ENST00000538456 ZHX1Q9UKY1 873 aaPredicted RBP16.85■□□□□ 0.29
SMARCA4-206ENST00000538456 DIS3Q9Y2L1 958 aaKnown RBP16.85■□□□□ 0.29
SMARCA4-206ENST00000538456 MYO9BQ13459 2157 aa16.85■□□□□ 0.29
SMARCA4-206ENST00000538456 GREB1LQ9C091 1923 aaPredicted RBP16.84■□□□□ 0.29
SMARCA4-206ENST00000538456 SLC4A3P48751 1232 aa16.84■□□□□ 0.29
SMARCA4-206ENST00000538456 HNRNPUQ00839 825 aaKnown RBP eCLIP16.84■□□□□ 0.29
SMARCA4-206ENST00000538456 ANKRD33Q7Z3H0 272 aa16.84■□□□□ 0.29
SMARCA4-206ENST00000538456 REPS2Q8NFH8 660 aa16.84■□□□□ 0.29
SMARCA4-206ENST00000538456 NUP133Q8WUM0 1156 aa16.84■□□□□ 0.29
SMARCA4-206ENST00000538456 SLC4A4Q9Y6R1 1079 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms