RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 COL4A1P02462 1669 aa20.3■□□□□ 0.84
RAB40C-203ENST00000535977 ACTN4O43707 911 aaKnown RBP20.3■□□□□ 0.84
RAB40C-203ENST00000535977 PDE4BQ07343 736 aa20.3■□□□□ 0.84
RAB40C-203ENST00000535977 LONRF2Q1L5Z9 754 aa20.3■□□□□ 0.84
RAB40C-203ENST00000535977 CCDC172P0C7W6 258 aa20.29■□□□□ 0.84
RAB40C-203ENST00000535977 TRAPPC10P48553 1259 aa20.29■□□□□ 0.84
RAB40C-203ENST00000535977 CORO7P57737 925 aa20.29■□□□□ 0.84
RAB40C-203ENST00000535977 NBPF5PQ86XG9 351 aaPredicted RBP20.29■□□□□ 0.84
RAB40C-203ENST00000535977 BANK1Q8NDB2 785 aa20.29■□□□□ 0.84
RAB40C-203ENST00000535977 ZNF384Q8TF68 577 aa20.29■□□□□ 0.84
RAB40C-203ENST00000535977 VPS54Q9P1Q0 977 aa20.29■□□□□ 0.84
RAB40C-203ENST00000535977 USP21Q9UK80 565 aa20.29■□□□□ 0.84
RAB40C-203ENST00000535977 CEP83Q9Y592 693 aa20.29■□□□□ 0.84
RAB40C-203ENST00000535977 ZPR1O75312 459 aa20.29■□□□□ 0.84
RAB40C-203ENST00000535977 BMP6P22004 513 aa20.29■□□□□ 0.84
RAB40C-203ENST00000535977 BICDL1Q6ZP65 573 aa20.29■□□□□ 0.84
RAB40C-203ENST00000535977 DCP1AQ9NPI6 582 aaPredicted RBP20.29■□□□□ 0.84
RAB40C-203ENST00000535977 RPS6KA5O75582 802 aa20.28■□□□□ 0.84
RAB40C-203ENST00000535977 GRIN1Q05586 938 aa20.28■□□□□ 0.84
RAB40C-203ENST00000535977 CCDC178Q5BJE1 867 aa20.28■□□□□ 0.84
RAB40C-203ENST00000535977 SUGP1Q8IWZ8 645 aaKnown RBP20.28■□□□□ 0.84
RAB40C-203ENST00000535977 PDE11AQ9HCR9 933 aa20.28■□□□□ 0.84
RAB40C-203ENST00000535977 MAP2K7O14733 419 aa20.27■□□□□ 0.84
RAB40C-203ENST00000535977 FOXN1O15353 648 aa20.27■□□□□ 0.84
RAB40C-203ENST00000535977 KIF5BP33176 963 aa20.27■□□□□ 0.84
RAB40C-203ENST00000535977 RSRC2Q7L4I2 434 aaKnown RBP20.27■□□□□ 0.84
RAB40C-203ENST00000535977 ZNF622Q969S3 477 aaKnown RBP eCLIP20.27■□□□□ 0.84
RAB40C-203ENST00000535977 BAZ2AQ9UIF9 1905 aaKnown RBP20.27■□□□□ 0.84
RAB40C-203ENST00000535977 CASZ1Q86V15 1759 aa20.27■□□□□ 0.84
RAB40C-203ENST00000535977 ZNF18P17022 549 aa20.27■□□□□ 0.84
RAB40C-203ENST00000535977 PLCD1P51178 756 aa20.27■□□□□ 0.84
RAB40C-203ENST00000535977 CYP2D7A0A087X1C5 515 aa20.26■□□□□ 0.83
RAB40C-203ENST00000535977 PLEKHA8P1O95397 391 aa20.26■□□□□ 0.83
RAB40C-203ENST00000535977 PPP2R3AQ06190 1150 aa20.26■□□□□ 0.83
RAB40C-203ENST00000535977 CCDC91Q7Z6B0 441 aa20.26■□□□□ 0.83
RAB40C-203ENST00000535977 FAM177A1Q8N128 213 aaPredicted RBP20.26■□□□□ 0.83
RAB40C-203ENST00000535977 TNFRSF25Q93038 417 aa20.26■□□□□ 0.83
RAB40C-203ENST00000535977 CXorf56Q9H5V9 222 aa20.26■□□□□ 0.83
RAB40C-203ENST00000535977 NFE2L3Q9Y4A8 694 aa20.26■□□□□ 0.83
RAB40C-203ENST00000535977 VPS72Q15906 364 aa20.26■□□□□ 0.83
RAB40C-203ENST00000535977 MCTP2Q6DN12 878 aa20.26■□□□□ 0.83
RAB40C-203ENST00000535977 DPF2Q92785 391 aa20.26■□□□□ 0.83
RAB40C-203ENST00000535977 GSDMAQ96QA5 445 aa20.26■□□□□ 0.83
RAB40C-203ENST00000535977 EP400Q96L91 3159 aa20.26■□□□□ 0.83
RAB40C-203ENST00000535977 CNTNAP5Q8WYK1 1306 aa20.26■□□□□ 0.83
RAB40C-203ENST00000535977 MYH13Q9UKX3 1938 aa20.26■□□□□ 0.83
RAB40C-203ENST00000535977 WTIPA6NIX2 430 aaPredicted RBP20.26■□□□□ 0.83
RAB40C-203ENST00000535977 SH3RF1Q7Z6J0 888 aa20.26■□□□□ 0.83
RAB40C-203ENST00000535977 ZSCAN12O43309 604 aa20.25■□□□□ 0.83
RAB40C-203ENST00000535977 PRDM1O75626 825 aa20.25■□□□□ 0.83
RAB40C-203ENST00000535977 CALML3P27482 149 aa20.25■□□□□ 0.83
RAB40C-203ENST00000535977 TTC38Q5R3I4 469 aa20.25■□□□□ 0.83
RAB40C-203ENST00000535977 SWT1Q5T5J6 900 aaKnown RBP20.25■□□□□ 0.83
RAB40C-203ENST00000535977 COL24A1Q17RW2 1714 aa20.25■□□□□ 0.83
RAB40C-203ENST00000535977 MAST2Q6P0Q8 1798 aa20.25■□□□□ 0.83
RAB40C-203ENST00000535977 ARHGAP6O43182 974 aa20.25■□□□□ 0.83
RAB40C-203ENST00000535977 SCG2P13521 617 aa20.25■□□□□ 0.83
RAB40C-203ENST00000535977 GSCP56915 257 aaPredicted RBP20.25■□□□□ 0.83
RAB40C-203ENST00000535977 FAM98CQ17RN3 349 aaKnown RBP20.25■□□□□ 0.83
RAB40C-203ENST00000535977 RABGGTAQ92696 567 aa20.25■□□□□ 0.83
RAB40C-203ENST00000535977 SHISA4Q96DD7 197 aa20.25■□□□□ 0.83
RAB40C-203ENST00000535977 SH3GLB2Q9NR46 395 aa20.25■□□□□ 0.83
RAB40C-203ENST00000535977 TAF1P21675 1872 aa20.24■□□□□ 0.83
RAB40C-203ENST00000535977 MAP3K9P80192 1104 aa20.24■□□□□ 0.83
RAB40C-203ENST00000535977 TBX2Q13207 712 aaPredicted RBP20.24■□□□□ 0.83
RAB40C-203ENST00000535977 MCM6Q14566 821 aa20.24■□□□□ 0.83
RAB40C-203ENST00000535977 MMS22LQ6ZRQ5 1243 aa20.24■□□□□ 0.83
RAB40C-203ENST00000535977 PDILTQ8N807 584 aa20.24■□□□□ 0.83
RAB40C-203ENST00000535977 WDR66Q8TBY9 1149 aa20.24■□□□□ 0.83
RAB40C-203ENST00000535977 CCDC88AQ3V6T2 1871 aa20.24■□□□□ 0.83
RAB40C-203ENST00000535977 GOLGA6L9A6NEM1 432 aa20.24■□□□□ 0.83
RAB40C-203ENST00000535977 N4BP1O75113 896 aaKnown RBP20.24■□□□□ 0.83
RAB40C-203ENST00000535977 ATP2C1P98194 919 aaPredicted RBP20.24■□□□□ 0.83
RAB40C-203ENST00000535977 PFKFB3Q16875 520 aaPredicted RBP20.24■□□□□ 0.83
RAB40C-203ENST00000535977 SPECC1LQ69YQ0 1117 aa20.24■□□□□ 0.83
RAB40C-203ENST00000535977 DGKHQ86XP1 1220 aa20.24■□□□□ 0.83
RAB40C-203ENST00000535977 SRBD1Q8N5C6 995 aaKnown RBP20.24■□□□□ 0.83
RAB40C-203ENST00000535977 RTCBQ9Y3I0 505 aaKnown RBP20.24■□□□□ 0.83
RAB40C-203ENST00000535977 LAMB1P07942 1786 aa20.24■□□□□ 0.83
RAB40C-203ENST00000535977 TSPY2A6NKD2 308 aa20.23■□□□□ 0.83
RAB40C-203ENST00000535977 GNAQP50148 359 aa20.23■□□□□ 0.83
RAB40C-203ENST00000535977 FNBP4Q8N3X1 1017 aaPredicted RBP20.23■□□□□ 0.83
RAB40C-203ENST00000535977 ANKS1AQ92625 1134 aa20.23■□□□□ 0.83
RAB40C-203ENST00000535977 DHX58Q96C10 678 aa20.23■□□□□ 0.83
RAB40C-203ENST00000535977 MKRN1Q9UHC7 482 aaKnown RBP20.23■□□□□ 0.83
RAB40C-203ENST00000535977 KCNG1Q9UIX4 513 aa20.23■□□□□ 0.83
RAB40C-203ENST00000535977 FAN1Q9Y2M0 1017 aa20.23■□□□□ 0.83
RAB40C-203ENST00000535977 LEMD3Q9Y2U8 911 aa20.23■□□□□ 0.83
RAB40C-203ENST00000535977 CCDC151A5D8V7 595 aa20.23■□□□□ 0.83
RAB40C-203ENST00000535977 SMIM22K7EJ46 135 aa20.23■□□□□ 0.83
RAB40C-203ENST00000535977 CPP00450 1065 aa20.23■□□□□ 0.83
RAB40C-203ENST00000535977 NLRP5P59047 1200 aa20.23■□□□□ 0.83
RAB40C-203ENST00000535977 GSTO1P78417 241 aa20.23■□□□□ 0.83
RAB40C-203ENST00000535977 LRRC31Q6UY01 552 aa20.23■□□□□ 0.83
RAB40C-203ENST00000535977 DZIP1Q86YF9 867 aaKnown RBP20.23■□□□□ 0.83
RAB40C-203ENST00000535977 MRFAP1Q9Y605 127 aa20.23■□□□□ 0.83
RAB40C-203ENST00000535977 VWA3AA6NCI4 1184 aa20.22■□□□□ 0.83
RAB40C-203ENST00000535977 STX10O60499 249 aa20.22■□□□□ 0.83
RAB40C-203ENST00000535977 NPY5RQ15761 445 aa20.22■□□□□ 0.83
RAB40C-203ENST00000535977 SPATA1Q5VX52 437 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms