RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 SLC5A4Q9NY91 659 aa25.47■■□□□ 1.67
CHKA-206ENST00000531341 APBB1O00213 710 aa25.46■■□□□ 1.67
CHKA-206ENST00000531341 FCER1AP12319 257 aa25.46■■□□□ 1.67
CHKA-206ENST00000531341 SMAD3P84022 425 aaKnown RBP25.46■■□□□ 1.67
CHKA-206ENST00000531341 ICA1Q05084 483 aa25.46■■□□□ 1.67
CHKA-206ENST00000531341 SWAP70Q9UH65 585 aa25.46■■□□□ 1.67
CHKA-206ENST00000531341 PGK1P00558 417 aa25.45■■□□□ 1.66
CHKA-206ENST00000531341 BCL11AQ9H165 835 aa25.45■■□□□ 1.66
CHKA-206ENST00000531341 ARHGEF10LQ9HCE6 1279 aa25.45■■□□□ 1.66
CHKA-206ENST00000531341 XPNPEP3Q9NQH7 507 aa25.45■■□□□ 1.66
CHKA-206ENST00000531341 ADAMTS5Q9UNA0 930 aa25.45■■□□□ 1.66
CHKA-206ENST00000531341 PHF24Q9UPV7 400 aa25.45■■□□□ 1.66
CHKA-206ENST00000531341 PANK1Q8TE04 598 aa25.44■■□□□ 1.66
CHKA-206ENST00000531341 LENG1Q96BZ8 264 aaPredicted RBP25.44■■□□□ 1.66
CHKA-206ENST00000531341 CDK8P49336 464 aa25.43■■□□□ 1.66
CHKA-206ENST00000531341 ZNF792Q3KQV3 632 aa25.43■■□□□ 1.66
CHKA-206ENST00000531341 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.43■■□□□ 1.66
CHKA-206ENST00000531341 MMP19Q99542 508 aa25.43■■□□□ 1.66
CHKA-206ENST00000531341 WDR46O15213 610 aaKnown RBP25.42■■□□□ 1.66
CHKA-206ENST00000531341 MBD4O95243 580 aa25.42■■□□□ 1.66
CHKA-206ENST00000531341 SLC25A27O95847 323 aa25.42■■□□□ 1.66
CHKA-206ENST00000531341 ZNF865P0CJ78 1059 aaPredicted RBP25.42■■□□□ 1.66
CHKA-206ENST00000531341 EEF2P13639 858 aaKnown RBP25.42■■□□□ 1.66
CHKA-206ENST00000531341 C12orf60Q5U649 245 aa25.42■■□□□ 1.66
CHKA-206ENST00000531341 TINF2Q9BSI4 451 aa25.42■■□□□ 1.66
CHKA-206ENST00000531341 TACC3Q9Y6A5 838 aa25.42■■□□□ 1.66
CHKA-206ENST00000531341 SMCHD1A6NHR9 2005 aa25.41■■□□□ 1.66
CHKA-206ENST00000531341 CLTBP09497 229 aa25.41■■□□□ 1.66
CHKA-206ENST00000531341 RARBP10826 455 aa25.41■■□□□ 1.66
CHKA-206ENST00000531341 ADD2P35612 726 aa25.41■■□□□ 1.66
CHKA-206ENST00000531341 RIOX2Q8IUF8 465 aa25.41■■□□□ 1.66
CHKA-206ENST00000531341 PARP14Q460N5 1801 aa25.4■■□□□ 1.66
CHKA-206ENST00000531341 A0A1W2PQ45 241 aaPredicted RBP25.4■■□□□ 1.66
CHKA-206ENST00000531341 A0A1W2PQY0 241 aa25.4■■□□□ 1.66
CHKA-206ENST00000531341 USP17L12C9JPN9 530 aa25.4■■□□□ 1.66
CHKA-206ENST00000531341 USP17L21D6R901 530 aa25.4■■□□□ 1.66
CHKA-206ENST00000531341 PQBP1O60828 265 aaKnown RBP25.4■■□□□ 1.66
CHKA-206ENST00000531341 SIRT2Q8IXJ6 389 aa25.4■■□□□ 1.66
CHKA-206ENST00000531341 CLASRPQ8N2M8 674 aaKnown RBP25.4■■□□□ 1.66
CHKA-206ENST00000531341 REPS2Q8NFH8 660 aa25.4■■□□□ 1.66
CHKA-206ENST00000531341 BOLA2Q9H3K6 86 aa25.4■■□□□ 1.66
CHKA-206ENST00000531341 SH2D4AQ9H788 454 aa25.4■■□□□ 1.66
CHKA-206ENST00000531341 ATP8A2Q9NTI2 1148 aa25.4■■□□□ 1.66
CHKA-206ENST00000531341 NRBP1Q9UHY1 535 aa25.4■■□□□ 1.66
CHKA-206ENST00000531341 ZNF214Q9UL59 606 aaPredicted RBP25.4■■□□□ 1.66
CHKA-206ENST00000531341 ZNFX1Q9P2E3 1918 aaKnown RBP25.39■■□□□ 1.66
CHKA-206ENST00000531341 VWA5AO00534 786 aa25.39■■□□□ 1.66
CHKA-206ENST00000531341 HSP90AB4PQ58FF6 505 aa25.39■■□□□ 1.66
CHKA-206ENST00000531341 C16orf86Q6ZW13 317 aa25.39■■□□□ 1.66
CHKA-206ENST00000531341 RNF180Q86T96 592 aa25.39■■□□□ 1.66
CHKA-206ENST00000531341 RNPC3Q96LT9 517 aaKnown RBP25.39■■□□□ 1.66
CHKA-206ENST00000531341 PAG1Q9NWQ8 432 aa25.39■■□□□ 1.66
CHKA-206ENST00000531341 COL11A1P12107 1806 aaPredicted RBP25.38■■□□□ 1.65
CHKA-206ENST00000531341 KIAA0355O15063 1070 aa25.38■■□□□ 1.65
CHKA-206ENST00000531341 ADAMTS4O75173 837 aa25.38■■□□□ 1.65
CHKA-206ENST00000531341 IFIT2P09913 472 aaKnown RBP25.38■■□□□ 1.65
CHKA-206ENST00000531341 FOSL2P15408 326 aa25.38■■□□□ 1.65
CHKA-206ENST00000531341 STAT3P40763 770 aa25.38■■□□□ 1.65
CHKA-206ENST00000531341 FAM83BQ5T0W9 1011 aa25.38■■□□□ 1.65
CHKA-206ENST00000531341 KIF1BPQ96EK5 621 aa25.38■■□□□ 1.65
CHKA-206ENST00000531341 CCDC17Q96LX7 622 aa25.38■■□□□ 1.65
CHKA-206ENST00000531341 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.38■■□□□ 1.65
CHKA-206ENST00000531341 PPP1R9AQ9ULJ8 1098 aa25.38■■□□□ 1.65
CHKA-206ENST00000531341 RAG1P15918 1043 aa25.37■■□□□ 1.65
CHKA-206ENST00000531341 IRX5P78411 483 aaPredicted RBP25.37■■□□□ 1.65
CHKA-206ENST00000531341 FAAP100Q0VG06 881 aa25.37■■□□□ 1.65
CHKA-206ENST00000531341 KCTD2Q14681 263 aa25.37■■□□□ 1.65
CHKA-206ENST00000531341 TMEM39AQ9NV64 488 aa25.37■■□□□ 1.65
CHKA-206ENST00000531341 DIS3Q9Y2L1 958 aaKnown RBP25.37■■□□□ 1.65
CHKA-206ENST00000531341 BAZ2AQ9UIF9 1905 aaKnown RBP25.36■■□□□ 1.65
CHKA-206ENST00000531341 RAD21O60216 631 aa25.36■■□□□ 1.65
CHKA-206ENST00000531341 CTR9Q6PD62 1173 aa25.36■■□□□ 1.65
CHKA-206ENST00000531341 CHD9Q3L8U1 2897 aa25.35■■□□□ 1.65
CHKA-206ENST00000531341 AKR1A1P14550 325 aa25.35■■□□□ 1.65
CHKA-206ENST00000531341 GRIN2CQ14957 1233 aa25.35■■□□□ 1.65
CHKA-206ENST00000531341 NUP88Q99567 741 aaPredicted RBP25.35■■□□□ 1.65
CHKA-206ENST00000531341 KANSL2Q9H9L4 492 aa25.35■■□□□ 1.65
CHKA-206ENST00000531341 RIPK3Q9Y572 518 aa25.35■■□□□ 1.65
CHKA-206ENST00000531341 SNAI1O95863 264 aaPredicted RBP25.34■■□□□ 1.65
CHKA-206ENST00000531341 ACLYP53396 1101 aa25.34■■□□□ 1.65
CHKA-206ENST00000531341 HNRNPUQ00839 825 aaKnown RBP eCLIP25.34■■□□□ 1.65
CHKA-206ENST00000531341 USP38Q8NB14 1042 aa25.34■■□□□ 1.65
CHKA-206ENST00000531341 SLC4A4Q9Y6R1 1079 aa25.34■■□□□ 1.65
CHKA-206ENST00000531341 SYNRGQ9UMZ2 1314 aa25.34■■□□□ 1.65
CHKA-206ENST00000531341 MYH8P13535 1937 aa25.33■■□□□ 1.65
CHKA-206ENST00000531341 ROBO3Q96MS0 1386 aa25.33■■□□□ 1.65
CHKA-206ENST00000531341 MYADML2A6NDP7 307 aa25.33■■□□□ 1.65
CHKA-206ENST00000531341 FPGSQ05932 587 aa25.33■■□□□ 1.65
CHKA-206ENST00000531341 CCSAPQ6IQ19 270 aaPredicted RBP25.33■■□□□ 1.65
CHKA-206ENST00000531341 ANKRD33Q7Z3H0 272 aa25.33■■□□□ 1.65
CHKA-206ENST00000531341 KLHDC9Q8NEP7 349 aa25.33■■□□□ 1.65
CHKA-206ENST00000531341 PUS7LQ9H0K6 701 aaKnown RBP25.33■■□□□ 1.65
CHKA-206ENST00000531341 GOPCQ9HD26 462 aa25.33■■□□□ 1.65
CHKA-206ENST00000531341 ZBED9Q6R2W3 1325 aa25.33■■□□□ 1.64
CHKA-206ENST00000531341 ATP5JP18859 108 aa25.32■■□□□ 1.64
CHKA-206ENST00000531341 KCNA10Q16322 511 aa25.32■■□□□ 1.64
CHKA-206ENST00000531341 HAUS7Q99871 368 aa25.32■■□□□ 1.64
CHKA-206ENST00000531341 STARD7Q9NQZ5 370 aa25.32■■□□□ 1.64
CHKA-206ENST00000531341 PLXNA1Q9UIW2 1896 aa25.32■■□□□ 1.64
CHKA-206ENST00000531341 STK11IPQ8N1F8 1099 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms