RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 SHCBP1Q8NEM2 672 aa14.37□□□□□ -0.11
TRAPPC4-209ENST00000528230 SLC15A5A6NIM6 579 aa14.36□□□□□ -0.11
TRAPPC4-209ENST00000528230 STRNO43815 780 aa14.36□□□□□ -0.11
TRAPPC4-209ENST00000528230 MYCP01106 439 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC4-209ENST00000528230 HMGCRP04035 888 aa14.36□□□□□ -0.11
TRAPPC4-209ENST00000528230 INHAP05111 366 aa14.36□□□□□ -0.11
TRAPPC4-209ENST00000528230 PTPREP23469 700 aa14.36□□□□□ -0.11
TRAPPC4-209ENST00000528230 RGS2P41220 211 aa14.36□□□□□ -0.11
TRAPPC4-209ENST00000528230 FAM47AQ5JRC9 791 aa14.36□□□□□ -0.11
TRAPPC4-209ENST00000528230 GMCL1P1Q8NEA9 526 aa14.36□□□□□ -0.11
TRAPPC4-209ENST00000528230 SPATC1LQ9H0A9 340 aa14.36□□□□□ -0.11
TRAPPC4-209ENST00000528230 RNF208Q9H0X6 261 aa14.36□□□□□ -0.11
TRAPPC4-209ENST00000528230 CWC22Q9HCG8 908 aaKnown RBP14.36□□□□□ -0.11
TRAPPC4-209ENST00000528230 ZNFX1Q9P2E3 1918 aaKnown RBP14.36□□□□□ -0.11
TRAPPC4-209ENST00000528230 TSPY2A6NKD2 308 aa14.35□□□□□ -0.11
TRAPPC4-209ENST00000528230 RAD21O60216 631 aa14.35□□□□□ -0.11
TRAPPC4-209ENST00000528230 NDUFB10O96000 172 aa14.35□□□□□ -0.11
TRAPPC4-209ENST00000528230 GSPT1P15170 499 aaKnown RBP14.35□□□□□ -0.11
TRAPPC4-209ENST00000528230 CYP2B6P20813 491 aa14.35□□□□□ -0.11
TRAPPC4-209ENST00000528230 GJA8P48165 433 aa14.35□□□□□ -0.11
TRAPPC4-209ENST00000528230 NOVP48745 357 aa14.35□□□□□ -0.11
TRAPPC4-209ENST00000528230 NT5C2P49902 561 aa14.35□□□□□ -0.11
TRAPPC4-209ENST00000528230 MAP2K5Q13163 448 aa14.35□□□□□ -0.11
TRAPPC4-209ENST00000528230 FAM83BQ5T0W9 1011 aa14.35□□□□□ -0.11
TRAPPC4-209ENST00000528230 ATG4CQ96DT6 458 aa14.35□□□□□ -0.11
TRAPPC4-209ENST00000528230 MOV10L1Q9BXT6 1211 aaKnown RBP14.35□□□□□ -0.11
TRAPPC4-209ENST00000528230 MROH8Q9H579 483 aa14.35□□□□□ -0.11
TRAPPC4-209ENST00000528230 INCENPQ9NQS7 918 aa14.35□□□□□ -0.11
TRAPPC4-209ENST00000528230 PPP1R9AQ9ULJ8 1098 aa14.35□□□□□ -0.11
TRAPPC4-209ENST00000528230 IVNS1ABPQ9Y6Y0 642 aa14.35□□□□□ -0.11
TRAPPC4-209ENST00000528230 RANBP6O60518 1105 aaKnown RBP14.34□□□□□ -0.11
TRAPPC4-209ENST00000528230 SLC25A27O95847 323 aa14.34□□□□□ -0.11
TRAPPC4-209ENST00000528230 HOXC6P09630 235 aa14.34□□□□□ -0.11
TRAPPC4-209ENST00000528230 PRPF38AQ8NAV1 312 aaKnown RBP14.34□□□□□ -0.11
TRAPPC4-209ENST00000528230 DSCC1Q9BVC3 393 aa14.34□□□□□ -0.11
TRAPPC4-209ENST00000528230 UNC93B1Q9H1C4 597 aa14.34□□□□□ -0.11
TRAPPC4-209ENST00000528230 IL17RBQ9NRM6 502 aa14.34□□□□□ -0.11
TRAPPC4-209ENST00000528230 TCP11L1Q9NUJ3 509 aa14.34□□□□□ -0.11
TRAPPC4-209ENST00000528230 TACC3Q9Y6A5 838 aa14.34□□□□□ -0.11
TRAPPC4-209ENST00000528230 VWA5AO00534 786 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 ZNF213O14771 459 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 SGPL1O95470 568 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 ERCC3P19447 782 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 COPB2P35606 906 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 C1QBPQ07021 282 aaKnown RBP14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 GRB14Q14449 540 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 TMEM132BQ14DG7 1078 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 AKNAD1Q5T1N1 836 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 WDR78Q5VTH9 848 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 SLFN13Q68D06 897 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 MFSD6Q6ZSS7 791 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 RIOX2Q8IUF8 465 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 ABRAQ8N0Z2 381 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 STAG1Q8WVM7 1258 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 RUFY2Q8WXA3 655 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 TRIB2Q92519 343 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 APBA2Q99767 749 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 SLF1Q9BQI6 1058 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 RNF41Q9H4P4 317 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 PAK6Q9NQU5 681 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 FBXO28Q9NVF7 368 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 CTNNA3Q9UI47 895 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 FEM1BQ9UK73 627 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 LAMA4Q16363 1823 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 ZNF236Q9UL36 1845 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 RPTORQ8N122 1335 aa14.33□□□□□ -0.12
TRAPPC4-209ENST00000528230 FDX1P10109 184 aa14.32□□□□□ -0.12
TRAPPC4-209ENST00000528230 BMP3P12645 472 aa14.32□□□□□ -0.12
TRAPPC4-209ENST00000528230 ZKSCAN1P17029 563 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC4-209ENST00000528230 STAT3P40763 770 aa14.32□□□□□ -0.12
TRAPPC4-209ENST00000528230 PLS1Q14651 629 aa14.32□□□□□ -0.12
TRAPPC4-209ENST00000528230 MAP3K21Q5TCX8 1036 aa14.32□□□□□ -0.12
TRAPPC4-209ENST00000528230 LRRC47Q8N1G4 583 aaKnown RBP14.32□□□□□ -0.12
TRAPPC4-209ENST00000528230 REPS2Q8NFH8 660 aa14.32□□□□□ -0.12
TRAPPC4-209ENST00000528230 U2AF1L4Q8WU68 220 aaKnown RBP14.32□□□□□ -0.12
TRAPPC4-209ENST00000528230 GMCL1Q96IK5 515 aa14.32□□□□□ -0.12
TRAPPC4-209ENST00000528230 NUP88Q99567 741 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC4-209ENST00000528230 HMX1Q9NP08 348 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC4-209ENST00000528230 TOMM22Q9NS69 142 aa14.32□□□□□ -0.12
TRAPPC4-209ENST00000528230 STX8Q9UNK0 236 aa14.32□□□□□ -0.12
TRAPPC4-209ENST00000528230 CENPFP49454 3210 aa14.32□□□□□ -0.12
TRAPPC4-209ENST00000528230 RAD50Q92878 1312 aa14.32□□□□□ -0.12
TRAPPC4-209ENST00000528230 ATP2A1O14983 1001 aa14.31□□□□□ -0.12
TRAPPC4-209ENST00000528230 PLA2G6O60733 806 aa14.31□□□□□ -0.12
TRAPPC4-209ENST00000528230 HAND2P61296 217 aa14.31□□□□□ -0.12
TRAPPC4-209ENST00000528230 RRP12Q5JTH9 1297 aaKnown RBP14.31□□□□□ -0.12
TRAPPC4-209ENST00000528230 SAMD1Q6SPF0 538 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC4-209ENST00000528230 CENPQQ7L2Z9 268 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC4-209ENST00000528230 NCAPG2Q86XI2 1143 aa14.31□□□□□ -0.12
TRAPPC4-209ENST00000528230 SHISA4Q96DD7 197 aa14.31□□□□□ -0.12
TRAPPC4-209ENST00000528230 TTC14Q96N46 770 aa14.31□□□□□ -0.12
TRAPPC4-209ENST00000528230 NBPF3Q9H094 633 aa14.31□□□□□ -0.12
TRAPPC4-209ENST00000528230 CRISPLD2Q9H0B8 497 aa14.31□□□□□ -0.12
TRAPPC4-209ENST00000528230 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRAPPC4-209ENST00000528230 SLC5A4Q9NY91 659 aa14.31□□□□□ -0.12
TRAPPC4-209ENST00000528230 ZNF214Q9UL59 606 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC4-209ENST00000528230 PDE4DIPQ5VU43 2346 aa14.3□□□□□ -0.12
TRAPPC4-209ENST00000528230 NMT2O60551 498 aa14.3□□□□□ -0.12
TRAPPC4-209ENST00000528230 ZBED4O75132 1171 aa14.3□□□□□ -0.12
TRAPPC4-209ENST00000528230 FCER1AP12319 257 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms