RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	PARP1	P09874	1014 aa	Known RBP	7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	KLRK1	P26718	216 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	KRT2	P35908	639 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	TXLNA	P40222	546 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	CRK	P46108	304 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	REST	Q13127	1097 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	PKP1	Q13835	747 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	ZSCAN23	Q3MJ62	389 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	SLFNL1	Q499Z3	407 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	ASPRV1	Q53RT3	343 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	FKBP1C	Q5VVH2	108 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	ADAL	Q6DHV7	355 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	TXNRD3	Q86VQ6	643 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	NOSTRIN	Q8IVI9	506 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	MAPKAPK5	Q8IW41	473 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	ENAH	Q8N8S7	591 aa	Predicted RBP	7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	PNMA1	Q8ND90	353 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	NEDD1	Q8NHV4	660 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	LEO1	Q8WVC0	666 aa	Predicted RBP	7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	RRP36	Q96EU6	259 aa	Known RBP	7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	IDI2	Q9BXS1	227 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	FHDC1	Q9C0D6	1143 aa	Predicted RBP	7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	TNMD	Q9H2S6	317 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	NCOA5	Q9HCD5	579 aa	Known RBP	7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	HERC5	Q9UII4	1024 aa	Known RBP	7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	RCOR1	Q9UKL0	485 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	BRPF3	Q9ULD4	1205 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	STX8	Q9UNK0	236 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	CNPY2	Q9Y2B0	182 aa		7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	MORC2	Q9Y6X9	1032 aa	Predicted RBP	7.2	□□□□□ -1.26
PABPC4-222	ENST00000527718	TNRC6C	Q9HCJ0	1690 aa	Known RBP	7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	LRRC37A	A6NMS7	1700 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	SPDYE16	A6NNV3	312 aa	Predicted RBP	7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	LAD1	O00515	517 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	SPTLC2	O15270	562 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	MAP3K7	O43318	606 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	MMP1	P03956	469 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	CHGB	P05060	677 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	TPM3	P06753	285 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	U2AF2	P26368	475 aa	Known RBP eCLIP	7.19	□□□□□ -1.26	2e-13	■□□□□ 11.2
PABPC4-222	ENST00000527718	NASP	P49321	788 aa	Predicted RBP	7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	CDK8	P49336	464 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	CCDC173	Q0VFZ6	552 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	DLGAP5	Q15398	846 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	SEC23A	Q15436	765 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	DIXDC1	Q155Q3	683 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	MYSM1	Q5VVJ2	828 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	KRT40	Q6A162	431 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	TMTC3	Q6ZXV5	915 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	ADGRA1	Q86SQ6	560 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	FERMT3	Q86UX7	667 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	MRPS27	Q92552	414 aa	Known RBP	7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	OSBPL5	Q9H0X9	879 aa	Predicted RBP	7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	TAOK3	Q9H2K8	898 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	KANSL2	Q9H9L4	492 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	GRPEL1	Q9HAV7	217 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	C6orf50	Q9HD87	102 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	USP25	Q9UHP3	1055 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	DACH1	Q9UI36	760 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	ZNRF3	Q9ULT6	936 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	DAGLA	Q9Y4D2	1042 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	ARIH1	Q9Y4X5	557 aa	Predicted RBP	7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	TAF6L	Q9Y6J9	622 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	LAMA4	Q16363	1823 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	CCDC88A	Q3V6T2	1871 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	PLIN4	Q96Q06	1357 aa		7.19	□□□□□ -1.26
PABPC4-222	ENST00000527718	COL2A1	P02458	1487 aa	Predicted RBP	7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	TRIM75P	A6NK02	468 aa		7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	SCG2	P13521	617 aa		7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	HOXA7	P31268	230 aa	Predicted RBP	7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	ADD1	P35611	737 aa	Known RBP	7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	EIF6	P56537	245 aa	Known RBP	7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	NLRP5	P59047	1200 aa		7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	KIF23	Q02241	960 aa	Predicted RBP	7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	FAM160A1	Q05DH4	1040 aa		7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	TROAP	Q12815	778 aa		7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	PICALM	Q13492	652 aa		7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	DACT2	Q5SW24	774 aa		7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	ANO1	Q5XXA6	986 aa		7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	RSBN1L	Q6PCB5	846 aa	Predicted RBP	7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	FOXD4L3	Q6VB84	417 aa	Predicted RBP	7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	TMEM179	Q6ZVK1	233 aa		7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	DIS3L2	Q8IYB7	885 aa	Known RBP	7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	KRI1	Q8N9T8	703 aa	Known RBP	7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	ZNF516	Q92618	1163 aa		7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	FERMT2	Q96AC1	680 aa		7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	SDF4	Q9BRK5	362 aa		7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	SYT17	Q9BSW7	474 aa		7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	SPZ1	Q9BXG8	430 aa		7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	RAB34	Q9BZG1	259 aa		7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	DBNDD1	Q9H9R9	158 aa		7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	MKRN1	Q9UHC7	482 aa	Known RBP	7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	KIAA1551	Q9HCM1	1747 aa		7.18	□□□□□ -1.26
PABPC4-222	ENST00000527718	MYH13	Q9UKX3	1938 aa		7.17	□□□□□ -1.26
PABPC4-222	ENST00000527718	CCDC194	A0A1B0GVG4	234 aa		7.17	□□□□□ -1.26
PABPC4-222	ENST00000527718	FSD2	A1L4K1	749 aa		7.17	□□□□□ -1.26

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