RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 ZNF335Q9H4Z2 1342 aaPredicted RBP17.99■□□□□ 0.47
PCDHA3-201ENST00000522353 ATP2C2O75185 946 aa17.99■□□□□ 0.47
PCDHA3-201ENST00000522353 FGAP02671 866 aa17.99■□□□□ 0.47
PCDHA3-201ENST00000522353 NLRP12P59046 1061 aa17.99■□□□□ 0.47
PCDHA3-201ENST00000522353 CFAP157Q5JU67 520 aa17.99■□□□□ 0.47
PCDHA3-201ENST00000522353 DHX36Q9H2U1 1008 aaKnown RBP17.99■□□□□ 0.47
PCDHA3-201ENST00000522353 A0A0D9SFI3 127 aa17.99■□□□□ 0.47
PCDHA3-201ENST00000522353 JAK2O60674 1132 aa17.99■□□□□ 0.47
PCDHA3-201ENST00000522353 KLHL30Q0D2K2 578 aa17.99■□□□□ 0.47
PCDHA3-201ENST00000522353 CCDC6Q16204 474 aa17.99■□□□□ 0.47
PCDHA3-201ENST00000522353 TICAM2Q86XR7 235 aa17.99■□□□□ 0.47
PCDHA3-201ENST00000522353 JPH2Q9BR39 696 aaPredicted RBP17.99■□□□□ 0.47
PCDHA3-201ENST00000522353 TNNC2P02585 160 aa17.99■□□□□ 0.47
PCDHA3-201ENST00000522353 NPR1P16066 1061 aa17.99■□□□□ 0.47
PCDHA3-201ENST00000522353 FANCCQ00597 558 aa17.99■□□□□ 0.47
PCDHA3-201ENST00000522353 CLUL1Q15846 466 aa17.99■□□□□ 0.47
PCDHA3-201ENST00000522353 ASPRV1Q53RT3 343 aa17.99■□□□□ 0.47
PCDHA3-201ENST00000522353 NELFBQ8WX92 580 aa17.99■□□□□ 0.47
PCDHA3-201ENST00000522353 KANSL2Q9H9L4 492 aa17.99■□□□□ 0.47
PCDHA3-201ENST00000522353 MED23Q9ULK4 1368 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 OR52Z1P0C646 297 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 KMT5BQ4FZB7 885 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 TMTC1Q8IUR5 882 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 SUGCTQ9HAC7 445 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 ZMYM6O95789 1325 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 FAM182BQ5T319 152 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 PPP1R21Q6ZMI0 780 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 RSPH3Q86UC2 560 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 CCT6BQ92526 530 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 TRIM7Q9C029 511 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 ATG3Q9NT62 314 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 MYOCDQ8IZQ8 938 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 DBNDD1Q9H9R9 158 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 ROBO2Q9HCK4 1378 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 SH3BP5O60239 455 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 ATP5DP30049 168 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 MAGEA1P43355 309 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 ERFEQ4G0M1 354 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 TTLL6Q8N841 843 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 SMC1BQ8NDV3 1235 aa17.98■□□□□ 0.47
PCDHA3-201ENST00000522353 TRERF1Q96PN7 1200 aa17.97■□□□□ 0.47
PCDHA3-201ENST00000522353 N4BP1O75113 896 aaKnown RBP17.97■□□□□ 0.47
PCDHA3-201ENST00000522353 RHOXF2BP0C7M4 288 aa17.97■□□□□ 0.47
PCDHA3-201ENST00000522353 XRCC5P13010 732 aaKnown RBP17.97■□□□□ 0.47
PCDHA3-201ENST00000522353 TBC1D31Q96DN5 1066 aa17.97■□□□□ 0.47
PCDHA3-201ENST00000522353 RHOXF2Q9BQY4 288 aa17.97■□□□□ 0.47
PCDHA3-201ENST00000522353 AP5M1Q9H0R1 490 aa17.97■□□□□ 0.47
PCDHA3-201ENST00000522353 COL4A3BPQ9Y5P4 624 aa17.97■□□□□ 0.47
PCDHA3-201ENST00000522353 MIS12Q9H081 205 aa17.97■□□□□ 0.47
PCDHA3-201ENST00000522353 DDX25Q9UHL0 483 aaKnown RBP17.97■□□□□ 0.47
PCDHA3-201ENST00000522353 GOLGA8HP0CJ92 632 aa17.97■□□□□ 0.47
PCDHA3-201ENST00000522353 SPATA24Q86W54 205 aa17.97■□□□□ 0.47
PCDHA3-201ENST00000522353 FAM178BQ8IXR5 827 aa17.97■□□□□ 0.47
PCDHA3-201ENST00000522353 SYCE1Q8N0S2 351 aa17.97■□□□□ 0.47
PCDHA3-201ENST00000522353 SERPINB13Q9UIV8 391 aa17.97■□□□□ 0.47
PCDHA3-201ENST00000522353 SMIM23A6NLE4 172 aa17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 POLA2Q14181 598 aa17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 CIAPIN1Q6FI81 312 aa17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 TAB2Q9NYJ8 693 aa17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 ATF5Q9Y2D1 282 aaPredicted RBP17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 V9GYY5 206 aaPredicted RBP17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 MYO5CQ9NQX4 1742 aa17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 TTLL1O95922 423 aa17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 PSMC4P43686 418 aa17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 UTP14CQ5TAP6 766 aaKnown RBP17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 SFMBT2Q5VUG0 894 aa17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 ZMYND15Q9H091 742 aa17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 KCNK9Q9NPC2 374 aa17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 NKIRAS1Q9NYS0 192 aa17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 POLGP54098 1239 aaPredicted RBP17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 TFDP1Q14186 410 aa17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 CDC37L1Q7L3B6 337 aa17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 NLRP10Q86W26 655 aa17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 RDH13Q8NBN7 331 aa17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 ATP6V0A1Q93050 837 aa17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 NAPGQ99747 312 aaPredicted RBP17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 RSPH14Q9UHP6 348 aa17.96■□□□□ 0.47
PCDHA3-201ENST00000522353 GIPC1O14908 333 aa17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 IREB2P48200 963 aaKnown RBP17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 GABPAQ06546 454 aa17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 CLEC4GQ6UXB4 293 aa17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 PUS3Q9BZE2 481 aaKnown RBP17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 XPOTO43592 962 aaKnown RBP17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 PFKFB2O60825 505 aa17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 CAPN2P17655 700 aa17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 TECP42680 631 aa17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 DMP1Q13316 513 aaPredicted RBP17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 GEN1Q17RS7 908 aa17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 SECISBP2LQ93073 1101 aaKnown RBP17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 USTQ9Y2C2 406 aa17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 HEG1Q9ULI3 1381 aa17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 CPLX4Q7Z7G2 160 aa17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 GSDMBQ8TAX9 411 aa17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 MAIP1Q8WWC4 291 aa17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 PALLDQ8WX93 1383 aa17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 KDM5AP29375 1690 aaKnown RBP17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 CRCPO75575 148 aa17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 PPP2R5AQ15172 486 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms