RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 WWC2Q6AWC2 1192 aa21.16■□□□□ 0.98
TRAPPC9-210ENST00000521667 PSMD1Q99460 953 aa21.16■□□□□ 0.98
TRAPPC9-210ENST00000521667 PIK3AP1Q6ZUJ8 805 aa21.15■□□□□ 0.98
TRAPPC9-210ENST00000521667 HEATR3Q7Z4Q2 680 aa21.15■□□□□ 0.98
TRAPPC9-210ENST00000521667 ZSCAN30Q86W11 494 aa21.15■□□□□ 0.98
TRAPPC9-210ENST00000521667 SGIP1Q9BQI5 828 aa21.15■□□□□ 0.98
TRAPPC9-210ENST00000521667 BARHL2Q9NY43 387 aa21.15■□□□□ 0.98
TRAPPC9-210ENST00000521667 FAM198AQ9UFP1 575 aa21.15■□□□□ 0.98
TRAPPC9-210ENST00000521667 USP17L5A8MUK1 530 aa21.14■□□□□ 0.98
TRAPPC9-210ENST00000521667 TTLL1O95922 423 aa21.14■□□□□ 0.98
TRAPPC9-210ENST00000521667 TCP10Q12799 353 aa21.14■□□□□ 0.98
TRAPPC9-210ENST00000521667 ZRSR1Q15695 479 aaKnown RBP21.14■□□□□ 0.98
TRAPPC9-210ENST00000521667 SPECC1Q5M775 1068 aa21.14■□□□□ 0.98
TRAPPC9-210ENST00000521667 GALNT17Q6IS24 598 aa21.14■□□□□ 0.98
TRAPPC9-210ENST00000521667 TYW1BQ6NUM6 668 aa21.14■□□□□ 0.98
TRAPPC9-210ENST00000521667 STXBP3O00186 592 aa21.14■□□□□ 0.97
TRAPPC9-210ENST00000521667 PTMAP06454 111 aaKnown RBP21.14■□□□□ 0.97
TRAPPC9-210ENST00000521667 PDHBP11177 359 aa21.14■□□□□ 0.97
TRAPPC9-210ENST00000521667 IQCB1Q15051 598 aa21.14■□□□□ 0.97
TRAPPC9-210ENST00000521667 CEP57L1Q8IYX8 460 aa21.14■□□□□ 0.97
TRAPPC9-210ENST00000521667 DAGLBQ8NCG7 672 aa21.14■□□□□ 0.97
TRAPPC9-210ENST00000521667 CCDC17Q96LX7 622 aa21.14■□□□□ 0.97
TRAPPC9-210ENST00000521667 A0A087WWV3 80 aa21.13■□□□□ 0.97
TRAPPC9-210ENST00000521667 WNT7AO00755 349 aa21.13■□□□□ 0.97
TRAPPC9-210ENST00000521667 ADAMTS3O15072 1205 aa21.13■□□□□ 0.97
TRAPPC9-210ENST00000521667 ZNF174Q15697 407 aa21.13■□□□□ 0.97
TRAPPC9-210ENST00000521667 KRBA2Q6ZNG9 492 aa21.13■□□□□ 0.97
TRAPPC9-210ENST00000521667 LRRC47Q8N1G4 583 aaKnown RBP21.13■□□□□ 0.97
TRAPPC9-210ENST00000521667 RRP36Q96EU6 259 aaKnown RBP21.13■□□□□ 0.97
TRAPPC9-210ENST00000521667 CPVLQ9H3G5 476 aa21.13■□□□□ 0.97
TRAPPC9-210ENST00000521667 PI4KBQ9UBF8 816 aa21.13■□□□□ 0.97
TRAPPC9-210ENST00000521667 CLIP2Q9UDT6 1046 aa21.13■□□□□ 0.97
TRAPPC9-210ENST00000521667 EIF6P56537 245 aaKnown RBP21.12■□□□□ 0.97
TRAPPC9-210ENST00000521667 TGFB2P61812 414 aa21.12■□□□□ 0.97
TRAPPC9-210ENST00000521667 CFAP100Q494V2 611 aa21.12■□□□□ 0.97
TRAPPC9-210ENST00000521667 LONRF3Q496Y0 759 aa21.12■□□□□ 0.97
TRAPPC9-210ENST00000521667 ASPRV1Q53RT3 343 aa21.12■□□□□ 0.97
TRAPPC9-210ENST00000521667 FERMT2Q96AC1 680 aa21.12■□□□□ 0.97
TRAPPC9-210ENST00000521667 NAT10Q9H0A0 1025 aaKnown RBP21.12■□□□□ 0.97
TRAPPC9-210ENST00000521667 CSRNP2Q9H175 543 aa21.12■□□□□ 0.97
TRAPPC9-210ENST00000521667 DNAJC18Q9H819 358 aa21.12■□□□□ 0.97
TRAPPC9-210ENST00000521667 DDTLA6NHG4 134 aaPredicted RBP21.12■□□□□ 0.97
TRAPPC9-210ENST00000521667 M0R2N6 131 aa21.12■□□□□ 0.97
TRAPPC9-210ENST00000521667 SNHG28P0DPA3 235 aa21.12■□□□□ 0.97
TRAPPC9-210ENST00000521667 PTGER2P43116 358 aa21.12■□□□□ 0.97
TRAPPC9-210ENST00000521667 PPP4R3BQ5MIZ7 849 aa21.12■□□□□ 0.97
TRAPPC9-210ENST00000521667 CLEC10AQ8IUN9 316 aa21.12■□□□□ 0.97
TRAPPC9-210ENST00000521667 ELOA2Q8IYF1 753 aaPredicted RBP21.12■□□□□ 0.97
TRAPPC9-210ENST00000521667 CNNM3Q8NE01 707 aa21.12■□□□□ 0.97
TRAPPC9-210ENST00000521667 GOLGA6L19H0YKK7 550 aa21.11■□□□□ 0.97
TRAPPC9-210ENST00000521667 MPHOSPH10O00566 681 aaKnown RBP21.11■□□□□ 0.97
TRAPPC9-210ENST00000521667 SH3BP5LQ7L8J4 393 aa21.11■□□□□ 0.97
TRAPPC9-210ENST00000521667 ZSCAN29Q8IWY8 852 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC9-210ENST00000521667 LARGE2Q8N3Y3 721 aa21.11■□□□□ 0.97
TRAPPC9-210ENST00000521667 CCDC12Q8WUD4 166 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC9-210ENST00000521667 PIM2Q9P1W9 311 aa21.11■□□□□ 0.97
TRAPPC9-210ENST00000521667 SEC63Q9UGP8 760 aaKnown RBP21.11■□□□□ 0.97
TRAPPC9-210ENST00000521667 TUBE1Q9UJT0 475 aa21.11■□□□□ 0.97
TRAPPC9-210ENST00000521667 BAZ2BQ9UIF8 2168 aaKnown RBP21.11■□□□□ 0.97
TRAPPC9-210ENST00000521667 NLRP12P59046 1061 aa21.11■□□□□ 0.97
TRAPPC9-210ENST00000521667 ATP2C1P98194 919 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC9-210ENST00000521667 HOMER1Q86YM7 354 aa21.11■□□□□ 0.97
TRAPPC9-210ENST00000521667 RIOX1Q9H6W3 641 aa21.11■□□□□ 0.97
TRAPPC9-210ENST00000521667 TDRD3Q9H7E2 651 aaKnown RBP21.11■□□□□ 0.97
TRAPPC9-210ENST00000521667 FRMPD2Q68DX3 1309 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC9-210ENST00000521667 PTGDRQ13258 359 aa21.1■□□□□ 0.97
TRAPPC9-210ENST00000521667 RSBN1LQ6PCB5 846 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC9-210ENST00000521667 METTL16Q86W50 562 aaKnown RBP21.1■□□□□ 0.97
TRAPPC9-210ENST00000521667 UBA5Q9GZZ9 404 aa21.1■□□□□ 0.97
TRAPPC9-210ENST00000521667 ZNF277Q9NRM2 450 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC9-210ENST00000521667 PCDHA6Q9UN73 950 aa21.1■□□□□ 0.97
TRAPPC9-210ENST00000521667 PCDHA8Q9Y5H6 950 aa21.1■□□□□ 0.97
TRAPPC9-210ENST00000521667 CCDC194A0A1B0GVG4 234 aa21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 BECN2A8MW95 431 aa21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 ENTPD3O75355 529 aa21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 SLURP2P0DP57 97 aa21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 NAPAP54920 295 aa21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 DPCR1Q3MIW9 517 aa21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 FOXP4Q8IVH2 680 aaPredicted RBP21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 PRMT6Q96LA8 375 aaPredicted RBP21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 PIGSQ96S52 555 aa21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 TRIM34Q9BYJ4 488 aa21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 ZMYND12Q9H0C1 365 aa21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 VPS33BQ9H267 617 aa21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 VAT1LQ9HCJ6 419 aa21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 HOOK1Q9UJC3 728 aaKnown RBP21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 MYH8P13535 1937 aa21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 BIN1O00499 593 aa21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 POLR2DO15514 142 aaKnown RBP21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 MSNP26038 577 aaKnown RBP21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 CLCN1P35523 988 aa21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 BRCA1P38398 1863 aaKnown RBP21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 PNOCQ13519 176 aa21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 SOGA3Q5TF21 947 aa21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 DHX40Q8IX18 779 aaKnown RBP21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 RASGRP4Q8TDF6 673 aa21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 BPIFA3Q9BQP9 254 aa21.09■□□□□ 0.97
TRAPPC9-210ENST00000521667 VIL1P09327 827 aaKnown RBP21.08■□□□□ 0.97
TRAPPC9-210ENST00000521667 CERKLQ49MI3 558 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC9-210ENST00000521667 USP49Q70CQ1 688 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms