RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 MIGA1Q8NAN2 632 aa11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 NKX2-3Q8TAU0 364 aa11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 RHPN1Q8TCX5 695 aa11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 GLMNQ92990 594 aa11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 USB1Q9BQ65 265 aaKnown RBP11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 RNF208Q9H0X6 261 aa11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 ASCC2Q9H1I8 757 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 IL1RAPL2Q9NP60 686 aa11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 ZBTB40Q9NUA8 1239 aa11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 BIN2Q9UBW5 565 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 TNRC18O15417 2968 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-221ENST00000520339 C19orf81C9J6K1 198 aa11.27□□□□□ -0.61
CTNNA1-221ENST00000520339 NR1I2O75469 434 aa11.27□□□□□ -0.61
CTNNA1-221ENST00000520339 GDF11O95390 407 aa11.27□□□□□ -0.61
CTNNA1-221ENST00000520339 HLA-DOAP06340 250 aa11.27□□□□□ -0.61
CTNNA1-221ENST00000520339 ELNP15502 786 aa11.27□□□□□ -0.61
CTNNA1-221ENST00000520339 MAP3K12Q12852 859 aa11.27□□□□□ -0.61
CTNNA1-221ENST00000520339 HABP4Q5JVS0 413 aaKnown RBP11.27□□□□□ -0.61
CTNNA1-221ENST00000520339 DESI1Q6ICB0 168 aa11.27□□□□□ -0.61
CTNNA1-221ENST00000520339 BRICD5Q6PL45 260 aa11.27□□□□□ -0.61
CTNNA1-221ENST00000520339 CERS3Q8IU89 383 aa11.27□□□□□ -0.61
CTNNA1-221ENST00000520339 CRACR2BQ8N4Y2 399 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-221ENST00000520339 P2RX7Q99572 595 aaKnown RBP11.27□□□□□ -0.61
CTNNA1-221ENST00000520339 UNC93B1Q9H1C4 597 aa11.27□□□□□ -0.61
CTNNA1-221ENST00000520339 GJD2Q9UKL4 321 aa11.27□□□□□ -0.61
CTNNA1-221ENST00000520339 ZBTB21Q9ULJ3 1066 aa11.27□□□□□ -0.61
CTNNA1-221ENST00000520339 USP17L10C9JJH3 530 aa11.26□□□□□ -0.61
CTNNA1-221ENST00000520339 GPR37L1O60883 481 aa11.26□□□□□ -0.61
CTNNA1-221ENST00000520339 INHAP05111 366 aa11.26□□□□□ -0.61
CTNNA1-221ENST00000520339 USP5P45974 858 aa11.26□□□□□ -0.61
CTNNA1-221ENST00000520339 VAC14Q08AM6 782 aa11.26□□□□□ -0.61
CTNNA1-221ENST00000520339 TATDN1Q6P1N9 297 aa11.26□□□□□ -0.61
CTNNA1-221ENST00000520339 U2AF1L4Q8WU68 220 aaKnown RBP11.26□□□□□ -0.61
CTNNA1-221ENST00000520339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.26□□□□□ -0.61
CTNNA1-221ENST00000520339 COA7Q96BR5 231 aa11.26□□□□□ -0.61
CTNNA1-221ENST00000520339 KIF1BPQ96EK5 621 aa11.26□□□□□ -0.61
CTNNA1-221ENST00000520339 RIOK1Q9BRS2 568 aaKnown RBP11.26□□□□□ -0.61
CTNNA1-221ENST00000520339 TMOD4Q9NZQ9 345 aa11.26□□□□□ -0.61
CTNNA1-221ENST00000520339 MORF4L1Q9UBU8 362 aa11.26□□□□□ -0.61
CTNNA1-221ENST00000520339 DDX19BQ9UMR2 479 aa11.26□□□□□ -0.61
CTNNA1-221ENST00000520339 MYH2Q9UKX2 1941 aa11.26□□□□□ -0.61
CTNNA1-221ENST00000520339 RAB11FIP3O75154 756 aa11.25□□□□□ -0.61
CTNNA1-221ENST00000520339 HMMRO75330 724 aa11.25□□□□□ -0.61
CTNNA1-221ENST00000520339 SGPL1O95470 568 aa11.25□□□□□ -0.61
CTNNA1-221ENST00000520339 GH2P01242 217 aa11.25□□□□□ -0.61
CTNNA1-221ENST00000520339 LYPD8Q6UX82 237 aa11.25□□□□□ -0.61
CTNNA1-221ENST00000520339 TTC6Q86TZ1 520 aa11.25□□□□□ -0.61
CTNNA1-221ENST00000520339 CLASRPQ8N2M8 674 aaKnown RBP11.25□□□□□ -0.61
CTNNA1-221ENST00000520339 EHD4Q9H223 541 aa11.25□□□□□ -0.61
CTNNA1-221ENST00000520339 TXNRD2Q9NNW7 524 aa11.25□□□□□ -0.61
CTNNA1-221ENST00000520339 H0YGN5 161 aa11.24□□□□□ -0.61
CTNNA1-221ENST00000520339 PDE6AP16499 860 aa11.24□□□□□ -0.61
CTNNA1-221ENST00000520339 CAPN2P17655 700 aa11.24□□□□□ -0.61
CTNNA1-221ENST00000520339 PLCD1P51178 756 aa11.24□□□□□ -0.61
CTNNA1-221ENST00000520339 HERVK_113P62684 666 aa11.24□□□□□ -0.61
CTNNA1-221ENST00000520339 IRX3P78415 501 aaPredicted RBP11.24□□□□□ -0.61
CTNNA1-221ENST00000520339 TTF1Q15361 905 aaPredicted RBP11.24□□□□□ -0.61
CTNNA1-221ENST00000520339 USP17L2Q6R6M4 530 aa11.24□□□□□ -0.61
CTNNA1-221ENST00000520339 PAK6Q9NQU5 681 aaPredicted RBP11.24□□□□□ -0.61
CTNNA1-221ENST00000520339 RBPJLQ9UBG7 517 aa11.24□□□□□ -0.61
CTNNA1-221ENST00000520339 SERPINB13Q9UIV8 391 aa11.24□□□□□ -0.61
CTNNA1-221ENST00000520339 RCAN3Q9UKA8 241 aa11.24□□□□□ -0.61
CTNNA1-221ENST00000520339 MKI67P46013 3256 aaKnown RBP11.24□□□□□ -0.61
CTNNA1-221ENST00000520339 MAGEB6P1A0A0J9YX57 407 aa11.23□□□□□ -0.61
CTNNA1-221ENST00000520339 TCRBV5S4A2TA0A5A2 114 aa11.23□□□□□ -0.61
CTNNA1-221ENST00000520339 PEX10O60683 326 aa11.23□□□□□ -0.61
CTNNA1-221ENST00000520339 IFIT2P09913 472 aaKnown RBP11.23□□□□□ -0.61
CTNNA1-221ENST00000520339 GABPAQ06546 454 aa11.23□□□□□ -0.61
CTNNA1-221ENST00000520339 CERKLQ49MI3 558 aaPredicted RBP11.23□□□□□ -0.61
CTNNA1-221ENST00000520339 SLC9C2Q5TAH2 1124 aa11.23□□□□□ -0.61
CTNNA1-221ENST00000520339 GPRC5AQ8NFJ5 357 aa11.23□□□□□ -0.61
CTNNA1-221ENST00000520339 THAP11Q96EK4 314 aa11.23□□□□□ -0.61
CTNNA1-221ENST00000520339 C12orf42Q96LP6 360 aa11.23□□□□□ -0.61
CTNNA1-221ENST00000520339 DEFB118Q96PH6 123 aa11.23□□□□□ -0.61
CTNNA1-221ENST00000520339 MYH13Q9UKX3 1938 aa11.23□□□□□ -0.61
CTNNA1-221ENST00000520339 ZSWIM8A7E2V4 1837 aa11.22□□□□□ -0.61
CTNNA1-221ENST00000520339 GOLIM4O00461 696 aa11.22□□□□□ -0.61
CTNNA1-221ENST00000520339 FARP2O94887 1054 aaPredicted RBP11.22□□□□□ -0.61
CTNNA1-221ENST00000520339 TFRCP02786 760 aaKnown RBP11.22□□□□□ -0.61
CTNNA1-221ENST00000520339 CENPBP07199 599 aaPredicted RBP11.22□□□□□ -0.61
CTNNA1-221ENST00000520339 GUCY1A2P33402 732 aa11.22□□□□□ -0.61
CTNNA1-221ENST00000520339 SHMT1P34896 483 aa11.22□□□□□ -0.61
CTNNA1-221ENST00000520339 BRCA2P51587 3418 aa11.22□□□□□ -0.61
CTNNA1-221ENST00000520339 AK9Q5TCS8 1911 aa11.22□□□□□ -0.61
CTNNA1-221ENST00000520339 ACER1Q8TDN7 264 aa11.22□□□□□ -0.61
CTNNA1-221ENST00000520339 GTF3C2Q8WUA4 911 aaPredicted RBP11.22□□□□□ -0.61
CTNNA1-221ENST00000520339 DPF3Q92784 378 aa11.22□□□□□ -0.61
CTNNA1-221ENST00000520339 EDC3Q96F86 508 aaKnown RBP11.22□□□□□ -0.61
CTNNA1-221ENST00000520339 YTHDC1Q96MU7 727 aaKnown RBP11.22□□□□□ -0.61
CTNNA1-221ENST00000520339 DNAJC2Q99543 621 aaKnown RBP11.22□□□□□ -0.61
CTNNA1-221ENST00000520339 KIAA1683Q9H0B3 1180 aa11.22□□□□□ -0.61
CTNNA1-221ENST00000520339 CHMP4BQ9H444 224 aaKnown RBP11.22□□□□□ -0.61
CTNNA1-221ENST00000520339 ZNF532Q9HCE3 1301 aa11.22□□□□□ -0.61
CTNNA1-221ENST00000520339 CENPFP49454 3210 aa11.22□□□□□ -0.61
CTNNA1-221ENST00000520339 HMGCRP04035 888 aa11.21□□□□□ -0.61
CTNNA1-221ENST00000520339 POLR3DP05423 398 aaPredicted RBP11.21□□□□□ -0.61
CTNNA1-221ENST00000520339 XRCC5P13010 732 aaKnown RBP11.21□□□□□ -0.61
CTNNA1-221ENST00000520339 ATP5JP18859 108 aa11.21□□□□□ -0.61
CTNNA1-221ENST00000520339 TRIM32Q13049 653 aa11.21□□□□□ -0.61
CTNNA1-221ENST00000520339 PDE3AQ14432 1141 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms