RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 ZNF281Q9Y2X9 895 aa5.25□□□□□ -1.57
RNU4-49P-201ENST00000516080 NPIPB6E9PJ23 425 aa5.24□□□□□ -1.57
RNU4-49P-201ENST00000516080 ETV2O00321 342 aaPredicted RBP5.24□□□□□ -1.57
RNU4-49P-201ENST00000516080 CLEC3AO75596 197 aa5.24□□□□□ -1.57
RNU4-49P-201ENST00000516080 CRKP46108 304 aa5.24□□□□□ -1.57
RNU4-49P-201ENST00000516080 ZNF165P49910 485 aa5.24□□□□□ -1.57
RNU4-49P-201ENST00000516080 PCBP3P57721 371 aaKnown RBP5.24□□□□□ -1.57
RNU4-49P-201ENST00000516080 NBPF9Q3BBW0 867 aa5.24□□□□□ -1.57
RNU4-49P-201ENST00000516080 SEZ6Q53EL9 994 aa5.24□□□□□ -1.57
RNU4-49P-201ENST00000516080 TIGD5Q53EQ6 642 aa5.24□□□□□ -1.57
RNU4-49P-201ENST00000516080 NBPF12Q5TAG4 269 aaPredicted RBP5.24□□□□□ -1.57
RNU4-49P-201ENST00000516080 OVOS1Q6IE37 1185 aa5.24□□□□□ -1.57
RNU4-49P-201ENST00000516080 ATG14Q6ZNE5 492 aa5.24□□□□□ -1.57
RNU4-49P-201ENST00000516080 NLRC3Q7RTR2 1065 aa5.24□□□□□ -1.57
RNU4-49P-201ENST00000516080 C1QL4Q86Z23 238 aa5.24□□□□□ -1.57
RNU4-49P-201ENST00000516080 ATG4CQ96DT6 458 aa5.24□□□□□ -1.57
RNU4-49P-201ENST00000516080 HDAC8Q9BY41 377 aa5.24□□□□□ -1.57
RNU4-49P-201ENST00000516080 KCNK12Q9HB15 430 aa5.24□□□□□ -1.57
RNU4-49P-201ENST00000516080 CD320Q9NPF0 282 aa5.24□□□□□ -1.57
RNU4-49P-201ENST00000516080 GPR160Q9UJ42 338 aa5.24□□□□□ -1.57
RNU4-49P-201ENST00000516080 SSU72P8A0A1W2PR75 194 aa5.23□□□□□ -1.57
RNU4-49P-201ENST00000516080 PEX10O60683 326 aa5.23□□□□□ -1.57
RNU4-49P-201ENST00000516080 RPL10P27635 214 aaKnown RBP5.23□□□□□ -1.57
RNU4-49P-201ENST00000516080 KCNA10Q16322 511 aa5.23□□□□□ -1.57
RNU4-49P-201ENST00000516080 USHBP1Q8N6Y0 703 aa5.23□□□□□ -1.57
RNU4-49P-201ENST00000516080 TCTN2Q96GX1 697 aa5.23□□□□□ -1.57
RNU4-49P-201ENST00000516080 INTS4Q96HW7 963 aaKnown RBP5.23□□□□□ -1.57
RNU4-49P-201ENST00000516080 NT5C1AQ9BXI3 368 aa5.23□□□□□ -1.57
RNU4-49P-201ENST00000516080 UBP1Q9NZI7 540 aa5.23□□□□□ -1.57
RNU4-49P-201ENST00000516080 EBF1Q9UH73 591 aa5.23□□□□□ -1.57
RNU4-49P-201ENST00000516080 ZMYM5Q9UJ78 669 aa5.23□□□□□ -1.57
RNU4-49P-201ENST00000516080 SEMA7AO75326 666 aa5.22□□□□□ -1.57
RNU4-49P-201ENST00000516080 ZSCAN22P10073 491 aaPredicted RBP5.22□□□□□ -1.57
RNU4-49P-201ENST00000516080 POLR2BP30876 1174 aaKnown RBP5.22□□□□□ -1.57
RNU4-49P-201ENST00000516080 MCM4P33991 863 aa5.22□□□□□ -1.57
RNU4-49P-201ENST00000516080 PDE6BP35913 854 aa5.22□□□□□ -1.57
RNU4-49P-201ENST00000516080 KIR2DL1P43626 348 aaPredicted RBP5.22□□□□□ -1.57
RNU4-49P-201ENST00000516080 KIR2DL2P43627 348 aaPredicted RBP5.22□□□□□ -1.57
RNU4-49P-201ENST00000516080 CLCQ05315 142 aa5.22□□□□□ -1.57
RNU4-49P-201ENST00000516080 CIAPIN1Q6FI81 312 aa5.22□□□□□ -1.57
RNU4-49P-201ENST00000516080 GK5Q6ZS86 529 aa5.22□□□□□ -1.57
RNU4-49P-201ENST00000516080 WAPLQ7Z5K2 1190 aa5.22□□□□□ -1.57
RNU4-49P-201ENST00000516080 TMC3Q7Z5M5 1100 aa5.22□□□□□ -1.57
RNU4-49P-201ENST00000516080 AMIGO3Q86WK7 504 aa5.22□□□□□ -1.57
RNU4-49P-201ENST00000516080 SLITRK4Q8IW52 837 aa5.22□□□□□ -1.57
RNU4-49P-201ENST00000516080 LINC00116Q8NCU8 138 aa5.22□□□□□ -1.57
RNU4-49P-201ENST00000516080 NKD1Q969G9 470 aa5.22□□□□□ -1.57
RNU4-49P-201ENST00000516080 G6PC3Q9BUM1 346 aa5.22□□□□□ -1.57
RNU4-49P-201ENST00000516080 TCFL5Q9UL49 500 aa5.22□□□□□ -1.57
RNU4-49P-201ENST00000516080 SMG5Q9UPR3 1016 aaKnown RBP5.22□□□□□ -1.57
RNU4-49P-201ENST00000516080 MEIS3P2A8K0S8 358 aa5.21□□□□□ -1.58
RNU4-49P-201ENST00000516080 SIGLEC6O43699 453 aa5.21□□□□□ -1.58
RNU4-49P-201ENST00000516080 PSPNO60542 156 aa5.21□□□□□ -1.58
RNU4-49P-201ENST00000516080 ENDOUP21128 410 aaKnown RBP5.21□□□□□ -1.58
RNU4-49P-201ENST00000516080 SLC14A2Q15849 920 aa5.21□□□□□ -1.58
RNU4-49P-201ENST00000516080 TMEM132EQ6IEE7 984 aa5.21□□□□□ -1.58
RNU4-49P-201ENST00000516080 LCNL1Q6ZST4 164 aa5.21□□□□□ -1.58
RNU4-49P-201ENST00000516080 ZNF605Q86T29 641 aa5.21□□□□□ -1.58
RNU4-49P-201ENST00000516080 KIAA0825Q8IV33 1275 aa5.21□□□□□ -1.58
RNU4-49P-201ENST00000516080 SHISA4Q96DD7 197 aa5.21□□□□□ -1.58
RNU4-49P-201ENST00000516080 MAP6Q96JE9 813 aa5.21□□□□□ -1.58
RNU4-49P-201ENST00000516080 FOXP3Q9BZS1 431 aa5.21□□□□□ -1.58
RNU4-49P-201ENST00000516080 ZNF552Q9H707 407 aaPredicted RBP5.21□□□□□ -1.58
RNU4-49P-201ENST00000516080 TEX51A0A1B0GUA7 166 aa5.2□□□□□ -1.58
RNU4-49P-201ENST00000516080 OR14I1A6ND48 311 aa5.2□□□□□ -1.58
RNU4-49P-201ENST00000516080 NRDCO43847 1150 aa5.2□□□□□ -1.58
RNU4-49P-201ENST00000516080 PRAMEF1O95521 474 aa5.2□□□□□ -1.58
RNU4-49P-201ENST00000516080 SYPP08247 313 aa5.2□□□□□ -1.58
RNU4-49P-201ENST00000516080 NME1P15531 152 aaKnown RBP5.2□□□□□ -1.58
RNU4-49P-201ENST00000516080 LINC00310P59036 64 aa5.2□□□□□ -1.58
RNU4-49P-201ENST00000516080 DLG4P78352 724 aa5.2□□□□□ -1.58
RNU4-49P-201ENST00000516080 NLRX1Q86UT6 975 aa5.2□□□□□ -1.58
RNU4-49P-201ENST00000516080 TMEM87AQ8NBN3 555 aa5.2□□□□□ -1.58
RNU4-49P-201ENST00000516080 DHRS1Q96LJ7 313 aa5.2□□□□□ -1.58
RNU4-49P-201ENST00000516080 SPON2Q9BUD6 331 aa5.2□□□□□ -1.58
RNU4-49P-201ENST00000516080 MCOLN1Q9GZU1 580 aa5.2□□□□□ -1.58
RNU4-49P-201ENST00000516080 PRDM14Q9GZV8 571 aa5.2□□□□□ -1.58
RNU4-49P-201ENST00000516080 CRTAC1Q9NQ79 661 aa5.2□□□□□ -1.58
RNU4-49P-201ENST00000516080 TMEM82A0PJX8 343 aa5.19□□□□□ -1.58
RNU4-49P-201ENST00000516080 NOTOA8MTQ0 251 aa5.19□□□□□ -1.58
RNU4-49P-201ENST00000516080 TNFRSF10CO14798 259 aa5.19□□□□□ -1.58
RNU4-49P-201ENST00000516080 NUAK1O60285 661 aa5.19□□□□□ -1.58
RNU4-49P-201ENST00000516080 USP2O75604 605 aaPredicted RBP5.19□□□□□ -1.58
RNU4-49P-201ENST00000516080 IMPDH2P12268 514 aa5.19□□□□□ -1.58
RNU4-49P-201ENST00000516080 ZNF16P17020 682 aaPredicted RBP5.19□□□□□ -1.58
RNU4-49P-201ENST00000516080 ZNF76P36508 570 aa5.19□□□□□ -1.58
RNU4-49P-201ENST00000516080 SNW1Q13573 536 aaKnown RBP5.19□□□□□ -1.58
RNU4-49P-201ENST00000516080 BBS9Q3SYG4 887 aa5.19□□□□□ -1.58
RNU4-49P-201ENST00000516080 INTS3Q68E01 1043 aaKnown RBP5.19□□□□□ -1.58
RNU4-49P-201ENST00000516080 CEP128Q6ZU80 1094 aa5.19□□□□□ -1.58
RNU4-49P-201ENST00000516080 KRTAP4-7Q9BYR0 210 aa5.19□□□□□ -1.58
RNU4-49P-201ENST00000516080 MKRN2Q9H000 416 aaKnown RBP5.19□□□□□ -1.58
RNU4-49P-201ENST00000516080 CHST7Q9NS84 486 aa5.19□□□□□ -1.58
RNU4-49P-201ENST00000516080 PRR13Q9NZ81 148 aa5.19□□□□□ -1.58
RNU4-49P-201ENST00000516080 TNFRSF10DQ9UBN6 386 aa5.19□□□□□ -1.58
RNU4-49P-201ENST00000516080 PCDHB12Q9Y5F1 795 aa5.19□□□□□ -1.58
RNU4-49P-201ENST00000516080 MYOCOSA0A1B0GUC4 107 aa5.18□□□□□ -1.58
RNU4-49P-201ENST00000516080 HRKO00198 91 aa5.18□□□□□ -1.58
RNU4-49P-201ENST00000516080 FKTNO75072 461 aa5.18□□□□□ -1.58
RNU4-49P-201ENST00000516080 PNLIPP16233 465 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms