RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 DIS3L2Q8IYB7 885 aaKnown RBP14.55□□□□□ -0.08
LYSMD3-204ENST00000509384 DCAF4Q8WV16 495 aa14.55□□□□□ -0.08
LYSMD3-204ENST00000509384 HOOK2Q96ED9 719 aa14.55□□□□□ -0.08
LYSMD3-204ENST00000509384 ARHGEF10LQ9HCE6 1279 aa14.55□□□□□ -0.08
LYSMD3-204ENST00000509384 CFAP45Q9UL16 551 aa14.55□□□□□ -0.08
LYSMD3-204ENST00000509384 SYNPO2Q9UMS6 1093 aa14.55□□□□□ -0.08
LYSMD3-204ENST00000509384 PPP2R3BQ9Y5P8 575 aa14.55□□□□□ -0.08
LYSMD3-204ENST00000509384 DDX49Q9Y6V7 483 aaKnown RBP14.55□□□□□ -0.08
LYSMD3-204ENST00000509384 SLC35G1Q2M3R5 365 aa14.54□□□□□ -0.08
LYSMD3-204ENST00000509384 DCAF15Q66K64 600 aa14.54□□□□□ -0.08
LYSMD3-204ENST00000509384 SLFN13Q68D06 897 aa14.54□□□□□ -0.08
LYSMD3-204ENST00000509384 GMCL1P1Q8NEA9 526 aa14.54□□□□□ -0.08
LYSMD3-204ENST00000509384 RRP36Q96EU6 259 aaKnown RBP14.54□□□□□ -0.08
LYSMD3-204ENST00000509384 SPATA32Q96LK8 384 aa14.54□□□□□ -0.08
LYSMD3-204ENST00000509384 PHF20Q9BVI0 1012 aa14.54□□□□□ -0.08
LYSMD3-204ENST00000509384 CPVLQ9H3G5 476 aa14.54□□□□□ -0.08
LYSMD3-204ENST00000509384 BRMS1Q9HCU9 246 aa14.54□□□□□ -0.08
LYSMD3-204ENST00000509384 GPCPD1Q9NPB8 672 aa14.54□□□□□ -0.08
LYSMD3-204ENST00000509384 TFIP11Q9UBB9 837 aaKnown RBP14.54□□□□□ -0.08
LYSMD3-204ENST00000509384 SEC63Q9UGP8 760 aaKnown RBP14.54□□□□□ -0.08
LYSMD3-204ENST00000509384 PITPNM2Q9BZ72 1349 aa14.54□□□□□ -0.08
LYSMD3-204ENST00000509384 MBD3O95983 291 aa14.53□□□□□ -0.08
LYSMD3-204ENST00000509384 ASNSP08243 561 aa14.53□□□□□ -0.08
LYSMD3-204ENST00000509384 U2AF2P26368 475 aaKnown RBP eCLIP14.53□□□□□ -0.083e-31■■■■■ 109.2
LYSMD3-204ENST00000509384 SLC1A4P43007 532 aa14.53□□□□□ -0.08
LYSMD3-204ENST00000509384 KLHL40Q2TBA0 621 aa14.53□□□□□ -0.08
LYSMD3-204ENST00000509384 NBPF12Q5TAG4 269 aaPredicted RBP14.53□□□□□ -0.08
LYSMD3-204ENST00000509384 MYSM1Q5VVJ2 828 aa14.53□□□□□ -0.08
LYSMD3-204ENST00000509384 SHISA4Q96DD7 197 aa14.53□□□□□ -0.08
LYSMD3-204ENST00000509384 L3MBTL3Q96JM7 780 aaPredicted RBP14.53□□□□□ -0.08
LYSMD3-204ENST00000509384 UBA5Q9GZZ9 404 aa14.53□□□□□ -0.08
LYSMD3-204ENST00000509384 FOXP1Q9H334 677 aaPredicted RBP14.53□□□□□ -0.08
LYSMD3-204ENST00000509384 ELP1O95163 1332 aa14.53□□□□□ -0.08
LYSMD3-204ENST00000509384 PHF20L1A8MW92 1017 aa14.52□□□□□ -0.08
LYSMD3-204ENST00000509384 BTBD18B2RXH4 712 aa14.52□□□□□ -0.08
LYSMD3-204ENST00000509384 F5H6K3 240 aa14.52□□□□□ -0.08
LYSMD3-204ENST00000509384 NDUFB10O96000 172 aa14.52□□□□□ -0.08
LYSMD3-204ENST00000509384 KRT2P35908 639 aa14.52□□□□□ -0.08
LYSMD3-204ENST00000509384 KLRC3Q07444 240 aa14.52□□□□□ -0.08
LYSMD3-204ENST00000509384 HEATR3Q7Z4Q2 680 aa14.52□□□□□ -0.08
LYSMD3-204ENST00000509384 HOMER1Q86YM7 354 aa14.52□□□□□ -0.08
LYSMD3-204ENST00000509384 NOSTRINQ8IVI9 506 aa14.52□□□□□ -0.08
LYSMD3-204ENST00000509384 LEO1Q8WVC0 666 aaPredicted RBP14.52□□□□□ -0.08
LYSMD3-204ENST00000509384 GPKOWQ92917 476 aaPredicted RBP eCLIP14.52□□□□□ -0.08
LYSMD3-204ENST00000509384 GMCL1Q96IK5 515 aa14.52□□□□□ -0.08
LYSMD3-204ENST00000509384 USP28Q96RU2 1077 aa14.52□□□□□ -0.08
LYSMD3-204ENST00000509384 RIOX1Q9H6W3 641 aa14.52□□□□□ -0.08
LYSMD3-204ENST00000509384 SH2D4AQ9H788 454 aa14.52□□□□□ -0.08
LYSMD3-204ENST00000509384 SH3GLB2Q9NR46 395 aa14.52□□□□□ -0.08
LYSMD3-204ENST00000509384 A0A1W2PRG0 241 aa14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 NLRP5P59047 1200 aa14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 UBE2HP62256 183 aa14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 CEBPZQ03701 1054 aaKnown RBP14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 WWC2Q6AWC2 1192 aa14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 KCTD1Q719H9 257 aa14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 CCDC148Q8NFR7 591 aa14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 ZNF341Q9BYN7 854 aa14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 FTOQ9C0B1 505 aaKnown RBP eCLIP14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 VAT1LQ9HCJ6 419 aa14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 GOPCQ9HD26 462 aa14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 GINM1Q9NU53 330 aa14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 CTNND1O60716 968 aaKnown RBP14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 GADD45BO75293 160 aaPredicted RBP14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 VEGFAP15692 232 aaPredicted RBP14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 CALML3P27482 149 aa14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 ECE1P42892 770 aa14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 NR5A1Q13285 461 aa14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 TTBK2Q6IQ55 1244 aa14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 FAM177A1Q8N128 213 aaPredicted RBP14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 GPT2Q8TD30 523 aa14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 ACER1Q8TDN7 264 aa14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 OXER1Q8TDS5 423 aa14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 PIGSQ96S52 555 aa14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 BARHL2Q9NY43 387 aa14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 TMX2Q9Y320 296 aa14.51□□□□□ -0.09
LYSMD3-204ENST00000509384 GLTPD2A6NH11 291 aa14.5□□□□□ -0.09
LYSMD3-204ENST00000509384 hCG_1984214I3L0E3 225 aa14.5□□□□□ -0.09
LYSMD3-204ENST00000509384 STXBP3O00186 592 aa14.5□□□□□ -0.09
LYSMD3-204ENST00000509384 SLC16A2P36021 539 aa14.5□□□□□ -0.09
LYSMD3-204ENST00000509384 SUPT20HL1Q3ZLR7 823 aa14.5□□□□□ -0.09
LYSMD3-204ENST00000509384 PRAMEF18Q5VWM3 479 aa14.5□□□□□ -0.09
LYSMD3-204ENST00000509384 ADGRF4Q8IZF3 695 aa14.5□□□□□ -0.09
LYSMD3-204ENST00000509384 ZNF713Q8N859 430 aaPredicted RBP14.5□□□□□ -0.09
LYSMD3-204ENST00000509384 CCDC12Q8WUD4 166 aaPredicted RBP14.5□□□□□ -0.09
LYSMD3-204ENST00000509384 DCPSQ96C86 337 aaKnown RBP14.5□□□□□ -0.09
LYSMD3-204ENST00000509384 RTEL1Q9NZ71 1219 aa14.5□□□□□ -0.09
LYSMD3-204ENST00000509384 GOLGA6L4A6NEF3 574 aa14.49□□□□□ -0.09
LYSMD3-204ENST00000509384 YEATS4O95619 227 aa14.49□□□□□ -0.09
LYSMD3-204ENST00000509384 BMP3P12645 472 aa14.49□□□□□ -0.09
LYSMD3-204ENST00000509384 EPHX2P34913 555 aa14.49□□□□□ -0.09
LYSMD3-204ENST00000509384 NAPAP54920 295 aa14.49□□□□□ -0.09
LYSMD3-204ENST00000509384 IKQ13123 557 aaPredicted RBP14.49□□□□□ -0.09
LYSMD3-204ENST00000509384 NPY5RQ15761 445 aa14.49□□□□□ -0.09
LYSMD3-204ENST00000509384 USP50Q70EL3 339 aaPredicted RBP14.49□□□□□ -0.09
LYSMD3-204ENST00000509384 SULF1Q8IWU6 871 aa14.49□□□□□ -0.09
LYSMD3-204ENST00000509384 WRNIP1Q96S55 665 aa14.49□□□□□ -0.09
LYSMD3-204ENST00000509384 NUP88Q99567 741 aaPredicted RBP14.49□□□□□ -0.09
LYSMD3-204ENST00000509384 JMJD4Q9H9V9 463 aa14.49□□□□□ -0.09
LYSMD3-204ENST00000509384 POLR3EQ9NVU0 708 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 278 ms