RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 STAP2Q9UGK3 403 aa23.86■■□□□ 1.41
UBE2D3-220ENST00000505307 RANBP2P49792 3224 aaKnown RBP23.85■■□□□ 1.41
UBE2D3-220ENST00000505307 ALPK3Q96L96 1907 aa23.85■■□□□ 1.41
UBE2D3-220ENST00000505307 PATL2C9JE40 543 aaKnown RBP23.85■■□□□ 1.41
UBE2D3-220ENST00000505307 APPP05067 770 aa23.85■■□□□ 1.41
UBE2D3-220ENST00000505307 CYBAP13498 195 aa23.85■■□□□ 1.41
UBE2D3-220ENST00000505307 TMEM132BQ14DG7 1078 aa23.85■■□□□ 1.41
UBE2D3-220ENST00000505307 GDF15Q99988 308 aa23.85■■□□□ 1.41
UBE2D3-220ENST00000505307 ZBTB47Q9UFB7 747 aaPredicted RBP23.85■■□□□ 1.41
UBE2D3-220ENST00000505307 PPP1R9AQ9ULJ8 1098 aa23.85■■□□□ 1.41
UBE2D3-220ENST00000505307 COBLO75128 1261 aa23.84■■□□□ 1.41
UBE2D3-220ENST00000505307 RRP1P56182 461 aaKnown RBP23.84■■□□□ 1.41
UBE2D3-220ENST00000505307 SAMD1Q6SPF0 538 aaPredicted RBP23.84■■□□□ 1.41
UBE2D3-220ENST00000505307 RIOX2Q8IUF8 465 aa23.84■■□□□ 1.41
UBE2D3-220ENST00000505307 ZNF444Q8N0Y2 327 aaPredicted RBP23.84■■□□□ 1.41
UBE2D3-220ENST00000505307 PI4K2BQ8TCG2 481 aa23.84■■□□□ 1.41
UBE2D3-220ENST00000505307 ZMYND8Q9ULU4 1186 aaPredicted RBP23.84■■□□□ 1.41
UBE2D3-220ENST00000505307 VWA5AO00534 786 aa23.83■■□□□ 1.41
UBE2D3-220ENST00000505307 RAD21O60216 631 aa23.83■■□□□ 1.41
UBE2D3-220ENST00000505307 STAT3P40763 770 aa23.83■■□□□ 1.41
UBE2D3-220ENST00000505307 EPB41L4AQ9HCS5 686 aaPredicted RBP23.83■■□□□ 1.41
UBE2D3-220ENST00000505307 SYNPO2Q9UMS6 1093 aa23.83■■□□□ 1.41
UBE2D3-220ENST00000505307 M0R2C6 588 aa23.82■■□□□ 1.4
UBE2D3-220ENST00000505307 DNM1LO00429 736 aa23.82■■□□□ 1.4
UBE2D3-220ENST00000505307 MX1P20591 662 aa23.82■■□□□ 1.4
UBE2D3-220ENST00000505307 FAM83BQ5T0W9 1011 aa23.82■■□□□ 1.4
UBE2D3-220ENST00000505307 IFNL3Q8IZI9 196 aa23.82■■□□□ 1.4
UBE2D3-220ENST00000505307 ARRDC4Q8NCT1 418 aa23.82■■□□□ 1.4
UBE2D3-220ENST00000505307 TRPV1Q8NER1 839 aa23.82■■□□□ 1.4
UBE2D3-220ENST00000505307 FSD1Q9BTV5 496 aa23.82■■□□□ 1.4
UBE2D3-220ENST00000505307 FBXO28Q9NVF7 368 aa23.82■■□□□ 1.4
UBE2D3-220ENST00000505307 NRBP1Q9UHY1 535 aa23.82■■□□□ 1.4
UBE2D3-220ENST00000505307 F5H6K3 240 aa23.81■■□□□ 1.4
UBE2D3-220ENST00000505307 SEPT4O43236 478 aa23.81■■□□□ 1.4
UBE2D3-220ENST00000505307 SLC3A2P08195 630 aaKnown RBP23.81■■□□□ 1.4
UBE2D3-220ENST00000505307 KLRC3Q07444 240 aa23.81■■□□□ 1.4
UBE2D3-220ENST00000505307 MMP19Q99542 508 aa23.81■■□□□ 1.4
UBE2D3-220ENST00000505307 SLF1Q9BQI6 1058 aa23.81■■□□□ 1.4
UBE2D3-220ENST00000505307 DIS3Q9Y2L1 958 aaKnown RBP23.81■■□□□ 1.4
UBE2D3-220ENST00000505307 GREB1LQ9C091 1923 aaPredicted RBP23.8■■□□□ 1.4
UBE2D3-220ENST00000505307 IGKV6D-41A0A0C4DH26 115 aa23.8■■□□□ 1.4
UBE2D3-220ENST00000505307 PDE4BQ07343 736 aa23.8■■□□□ 1.4
UBE2D3-220ENST00000505307 KCTD2Q14681 263 aa23.8■■□□□ 1.4
UBE2D3-220ENST00000505307 ZMYM1Q5SVZ6 1142 aa23.8■■□□□ 1.4
UBE2D3-220ENST00000505307 STK11IPQ8N1F8 1099 aa23.8■■□□□ 1.4
UBE2D3-220ENST00000505307 MKL1Q969V6 931 aa23.8■■□□□ 1.4
UBE2D3-220ENST00000505307 MAML3Q96JK9 1138 aa23.8■■□□□ 1.4
UBE2D3-220ENST00000505307 SENP6Q9GZR1 1112 aaPredicted RBP23.8■■□□□ 1.4
UBE2D3-220ENST00000505307 ZNF214Q9UL59 606 aaPredicted RBP23.8■■□□□ 1.4
UBE2D3-220ENST00000505307 PARP14Q460N5 1801 aa23.8■■□□□ 1.4
UBE2D3-220ENST00000505307 SZT2Q5T011 3432 aa23.8■■□□□ 1.4
UBE2D3-220ENST00000505307 LRRC26Q2I0M4 334 aa23.79■■□□□ 1.4
UBE2D3-220ENST00000505307 PRPF38AQ8NAV1 312 aaKnown RBP23.79■■□□□ 1.4
UBE2D3-220ENST00000505307 REPS2Q8NFH8 660 aa23.79■■□□□ 1.4
UBE2D3-220ENST00000505307 NAPBQ9H115 298 aa23.79■■□□□ 1.4
UBE2D3-220ENST00000505307 CLIP2Q9UDT6 1046 aa23.79■■□□□ 1.4
UBE2D3-220ENST00000505307 NDUFB10O96000 172 aa23.78■■□□□ 1.4
UBE2D3-220ENST00000505307 SYN1P17600 705 aa23.78■■□□□ 1.4
UBE2D3-220ENST00000505307 MAGEA10P43363 369 aaPredicted RBP23.78■■□□□ 1.4
UBE2D3-220ENST00000505307 PPP4R3BQ5MIZ7 849 aa23.78■■□□□ 1.4
UBE2D3-220ENST00000505307 OTUD7AQ8TE49 926 aaPredicted RBP23.78■■□□□ 1.4
UBE2D3-220ENST00000505307 TEX13BQ9BXU2 312 aa23.78■■□□□ 1.4
UBE2D3-220ENST00000505307 MTMR4Q9NYA4 1195 aa23.78■■□□□ 1.4
UBE2D3-220ENST00000505307 TTLL1O95922 423 aa23.77■■□□□ 1.4
UBE2D3-220ENST00000505307 SEC62Q99442 399 aaKnown RBP23.77■■□□□ 1.4
UBE2D3-220ENST00000505307 FRMPD3Q5JV73 1810 aa23.77■■□□□ 1.4
UBE2D3-220ENST00000505307 KBTBD13C9JR72 458 aa23.76■■□□□ 1.39
UBE2D3-220ENST00000505307 ATP2A1O14983 1001 aa23.76■■□□□ 1.39
UBE2D3-220ENST00000505307 PRDM1O75626 825 aa23.76■■□□□ 1.39
UBE2D3-220ENST00000505307 TSPY3P0CV98 308 aa23.76■■□□□ 1.39
UBE2D3-220ENST00000505307 TSPY8P0CW00 308 aa23.76■■□□□ 1.39
UBE2D3-220ENST00000505307 AAMPQ13685 434 aa23.76■■□□□ 1.39
UBE2D3-220ENST00000505307 ZNF792Q3KQV3 632 aa23.76■■□□□ 1.39
UBE2D3-220ENST00000505307 ANKRD45Q5TZF3 282 aa23.76■■□□□ 1.39
UBE2D3-220ENST00000505307 TICAM2Q86XR7 235 aa23.76■■□□□ 1.39
UBE2D3-220ENST00000505307 GMCL1P1Q8NEA9 526 aa23.76■■□□□ 1.39
UBE2D3-220ENST00000505307 NEDD1Q8NHV4 660 aa23.76■■□□□ 1.39
UBE2D3-220ENST00000505307 CEP95Q96GE4 821 aa23.76■■□□□ 1.39
UBE2D3-220ENST00000505307 CTDP1Q9Y5B0 961 aaPredicted RBP23.76■■□□□ 1.39
UBE2D3-220ENST00000505307 SALL3Q9BXA9 1300 aa23.76■■□□□ 1.39
UBE2D3-220ENST00000505307 PLIN4Q96Q06 1357 aa23.76■■□□□ 1.39
UBE2D3-220ENST00000505307 ZBED4O75132 1171 aa23.75■■□□□ 1.39
UBE2D3-220ENST00000505307 PPARAQ07869 468 aa23.75■■□□□ 1.39
UBE2D3-220ENST00000505307 HDAC1Q13547 482 aaPredicted RBP23.75■■□□□ 1.39
UBE2D3-220ENST00000505307 MSL3Q8N5Y2 521 aaKnown RBP23.75■■□□□ 1.39
UBE2D3-220ENST00000505307 NUP88Q99567 741 aaPredicted RBP23.75■■□□□ 1.39
UBE2D3-220ENST00000505307 TINF2Q9BSI4 451 aa23.75■■□□□ 1.39
UBE2D3-220ENST00000505307 FEM1BQ9UK73 627 aa23.75■■□□□ 1.39
UBE2D3-220ENST00000505307 FDX1P10109 184 aa23.74■■□□□ 1.39
UBE2D3-220ENST00000505307 SNRNP48Q6IEG0 339 aaKnown RBP23.74■■□□□ 1.39
UBE2D3-220ENST00000505307 GPR153Q6NV75 609 aa23.74■■□□□ 1.39
UBE2D3-220ENST00000505307 TDHQ8IZJ6 230 aa23.74■■□□□ 1.39
UBE2D3-220ENST00000505307 EVI5LQ96CN4 794 aa23.74■■□□□ 1.39
UBE2D3-220ENST00000505307 CRBNQ96SW2 442 aa23.74■■□□□ 1.39
UBE2D3-220ENST00000505307 UBE2OQ9C0C9 1292 aaKnown RBP23.74■■□□□ 1.39
UBE2D3-220ENST00000505307 COL11A1P12107 1806 aaPredicted RBP23.74■■□□□ 1.39
UBE2D3-220ENST00000505307 ZNFX1Q9P2E3 1918 aaKnown RBP23.73■■□□□ 1.39
UBE2D3-220ENST00000505307 PGK2P07205 417 aa23.73■■□□□ 1.39
UBE2D3-220ENST00000505307 LRIT3Q3SXY7 679 aa23.73■■□□□ 1.39
UBE2D3-220ENST00000505307 PRAMEF19Q5SWL8 479 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms